RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 PPP1R1CQ8WVI7 109 aa16.62■□□□□ 0.25
RFTN1-201ENST00000334133 RFPL4AA6NLU0 287 aa16.61■□□□□ 0.25
RFTN1-201ENST00000334133 RFPL4AL1F8VTS6 287 aa16.61■□□□□ 0.25
RFTN1-201ENST00000334133 HIST1H1DP16402 221 aaKnown RBP16.61■□□□□ 0.25
RFTN1-201ENST00000334133 WIPI1Q5MNZ9 446 aaPredicted RBP16.61■□□□□ 0.25
RFTN1-201ENST00000334133 ZNF660Q6AZW8 331 aaPredicted RBP16.61■□□□□ 0.25
RFTN1-201ENST00000334133 LYG2Q86SG7 212 aa16.61■□□□□ 0.25
RFTN1-201ENST00000334133 SLC25A42Q86VD7 318 aa16.61■□□□□ 0.25
RFTN1-201ENST00000334133 CDH26Q8IXH8 852 aa16.61■□□□□ 0.25
RFTN1-201ENST00000334133 ANGPTL6Q8NI99 470 aa16.61■□□□□ 0.25
RFTN1-201ENST00000334133 KCNG3Q8TAE7 436 aa16.61■□□□□ 0.25
RFTN1-201ENST00000334133 SUN5Q8TC36 379 aa16.61■□□□□ 0.25
RFTN1-201ENST00000334133 M1APQ8TC57 530 aa16.61■□□□□ 0.25
RFTN1-201ENST00000334133 DOCK10Q96BY6 2186 aa16.61■□□□□ 0.25
RFTN1-201ENST00000334133 LOC400499M0QZD8 3231 aa16.61■□□□□ 0.25
RFTN1-201ENST00000334133 KCNMB1Q16558 191 aa16.61■□□□□ 0.25
RFTN1-201ENST00000334133 ARMC10Q8N2F6 343 aa16.61■□□□□ 0.25
RFTN1-201ENST00000334133 RBPMSQ93062 196 aaKnown RBP16.61■□□□□ 0.25
RFTN1-201ENST00000334133 CRLF2Q9HC73 371 aa16.61■□□□□ 0.25
RFTN1-201ENST00000334133 M0R135 149 aa16.6■□□□□ 0.25
RFTN1-201ENST00000334133 CXCL13O43927 109 aa16.6■□□□□ 0.25
RFTN1-201ENST00000334133 CHAF1BQ13112 559 aa16.6■□□□□ 0.25
RFTN1-201ENST00000334133 GK2Q14410 553 aaPredicted RBP16.6■□□□□ 0.25
RFTN1-201ENST00000334133 MPPED2Q15777 294 aa16.6■□□□□ 0.25
RFTN1-201ENST00000334133 CRIP3Q6Q6R5 217 aa16.6■□□□□ 0.25
RFTN1-201ENST00000334133 ZNF799Q96GE5 643 aa16.6■□□□□ 0.25
RFTN1-201ENST00000334133 FREM1Q5H8C1 2179 aa16.6■□□□□ 0.25
RFTN1-201ENST00000334133 CCDC187A0A096LP49 1063 aa16.6■□□□□ 0.25
RFTN1-201ENST00000334133 CER1O95813 267 aa16.6■□□□□ 0.25
RFTN1-201ENST00000334133 B4GALT1P15291 398 aa16.6■□□□□ 0.25
RFTN1-201ENST00000334133 SLC9A3R2Q15599 337 aa16.6■□□□□ 0.25
RFTN1-201ENST00000334133 TIPARPQ7Z3E1 657 aaKnown RBP16.6■□□□□ 0.25
RFTN1-201ENST00000334133 ESX1Q8N693 406 aa16.6■□□□□ 0.25
RFTN1-201ENST00000334133 AKR7LQ8NHP1 331 aa16.6■□□□□ 0.25
RFTN1-201ENST00000334133 FBXW5Q969U6 566 aa16.6■□□□□ 0.25
RFTN1-201ENST00000334133 GPR173Q9NS66 373 aa16.6■□□□□ 0.25
RFTN1-201ENST00000334133 SDHAF2Q9NX18 166 aa16.6■□□□□ 0.25
RFTN1-201ENST00000334133 ZNF581Q9P0T4 197 aa16.6■□□□□ 0.25
RFTN1-201ENST00000334133 A0A087WZY1 265 aa16.59■□□□□ 0.25
RFTN1-201ENST00000334133 LOC102725191A0A1B0GVB3 256 aa16.59■□□□□ 0.25
RFTN1-201ENST00000334133 EFSO43281 561 aa16.59■□□□□ 0.25
RFTN1-201ENST00000334133 ANGPTL7O43827 346 aa16.59■□□□□ 0.25
RFTN1-201ENST00000334133 CBR3O75828 277 aa16.59■□□□□ 0.25
RFTN1-201ENST00000334133 BLVRBP30043 206 aaPredicted RBP16.59■□□□□ 0.25
RFTN1-201ENST00000334133 PTGFRP43088 359 aa16.59■□□□□ 0.25
RFTN1-201ENST00000334133 SUCLG1P53597 346 aaKnown RBP16.59■□□□□ 0.25
RFTN1-201ENST00000334133 CLVS2Q5SYC1 327 aa16.59■□□□□ 0.25
RFTN1-201ENST00000334133 ZNF774Q6NX45 483 aa16.59■□□□□ 0.25
RFTN1-201ENST00000334133 PPP1R32Q7Z5V6 425 aa16.59■□□□□ 0.25
RFTN1-201ENST00000334133 C1orf210Q8IVY1 113 aa16.59■□□□□ 0.25
RFTN1-201ENST00000334133 NAXDQ8IW45 347 aa16.59■□□□□ 0.25
RFTN1-201ENST00000334133 TMEM54Q969K7 222 aa16.59■□□□□ 0.25
RFTN1-201ENST00000334133 NECAB3Q96P71 396 aaPredicted RBP16.59■□□□□ 0.25
RFTN1-201ENST00000334133 DOCK7Q96N67 2140 aa16.59■□□□□ 0.25
RFTN1-201ENST00000334133 C5orf51A6NDU8 294 aa16.59■□□□□ 0.25
RFTN1-201ENST00000334133 OR6C65A6NJZ3 312 aa16.59■□□□□ 0.25
RFTN1-201ENST00000334133 EIF1BO60739 113 aaKnown RBP16.59■□□□□ 0.25
RFTN1-201ENST00000334133 HOXA6P31267 233 aa16.59■□□□□ 0.25
RFTN1-201ENST00000334133 DUSP3P51452 185 aaPredicted RBP16.59■□□□□ 0.25
RFTN1-201ENST00000334133 LSM6P62312 80 aaKnown RBP16.59■□□□□ 0.25
RFTN1-201ENST00000334133 ZNF239Q16600 458 aaKnown RBP16.59■□□□□ 0.25
RFTN1-201ENST00000334133 CLPPQ16740 277 aaPredicted RBP16.59■□□□□ 0.25
RFTN1-201ENST00000334133 DEFB123Q8N688 67 aa16.59■□□□□ 0.25
RFTN1-201ENST00000334133 RHBDD1Q8TEB9 315 aa16.59■□□□□ 0.25
RFTN1-201ENST00000334133 ZNF75AQ96N20 296 aa16.59■□□□□ 0.25
RFTN1-201ENST00000334133 LINC00052Q96N35 136 aa16.59■□□□□ 0.25
RFTN1-201ENST00000334133 NAA11Q9BSU3 229 aaPredicted RBP16.59■□□□□ 0.25
RFTN1-201ENST00000334133 COMMD9Q9P000 198 aa16.59■□□□□ 0.25
RFTN1-201ENST00000334133 DNAJC13O75165 2243 aa16.59■□□□□ 0.25
RFTN1-201ENST00000334133 P04436 131 aa16.59■□□□□ 0.25
RFTN1-201ENST00000334133 MGMTP16455 207 aa16.59■□□□□ 0.25
RFTN1-201ENST00000334133 GABRR1P24046 479 aa16.59■□□□□ 0.25
RFTN1-201ENST00000334133 RAC1P63000 192 aa16.59■□□□□ 0.25
RFTN1-201ENST00000334133 CSNK2A1P68400 391 aaPredicted RBP16.59■□□□□ 0.25
RFTN1-201ENST00000334133 HGFACQ04756 655 aa16.59■□□□□ 0.25
RFTN1-201ENST00000334133 BOLLQ8N9W6 283 aaKnown RBP16.59■□□□□ 0.25
RFTN1-201ENST00000334133 WBP1Q96G27 269 aa16.59■□□□□ 0.25
RFTN1-201ENST00000334133 PIGQQ9BRB3 760 aa16.59■□□□□ 0.25
RFTN1-201ENST00000334133 OR10A2Q9H208 303 aa16.59■□□□□ 0.25
RFTN1-201ENST00000334133 SH2D2AQ9NP31 389 aa16.59■□□□□ 0.25
RFTN1-201ENST00000334133 DEPPQ9NTK1 212 aa16.59■□□□□ 0.25
RFTN1-201ENST00000334133 hCG_1807616A0A1W2PRN6 198 aa16.58■□□□□ 0.24
RFTN1-201ENST00000334133 SIGLEC5O15389 551 aa16.58■□□□□ 0.24
RFTN1-201ENST00000334133 ZNF205O95201 554 aa16.58■□□□□ 0.24
RFTN1-201ENST00000334133 CCL1P22362 96 aa16.58■□□□□ 0.24
RFTN1-201ENST00000334133 SIGLEC14Q08ET2 396 aa16.58■□□□□ 0.24
RFTN1-201ENST00000334133 NKAPLQ5M9Q1 402 aa16.58■□□□□ 0.24
RFTN1-201ENST00000334133 BATF2Q8N1L9 274 aa16.58■□□□□ 0.24
RFTN1-201ENST00000334133 HDHD3Q9BSH5 251 aaPredicted RBP16.58■□□□□ 0.24
RFTN1-201ENST00000334133 SLC2A8Q9NY64 477 aa16.58■□□□□ 0.24
RFTN1-201ENST00000334133 TCFL5Q9UL49 500 aa16.58■□□□□ 0.24
RFTN1-201ENST00000334133 ZNF407Q9C0G0 2248 aa16.58■□□□□ 0.24
RFTN1-201ENST00000334133 PINLYPA6NC86 204 aa16.58■□□□□ 0.24
RFTN1-201ENST00000334133 CHRM2P08172 466 aa16.58■□□□□ 0.24
RFTN1-201ENST00000334133 ACKR3P25106 362 aa16.58■□□□□ 0.24
RFTN1-201ENST00000334133 MPGP29372 298 aa16.58■□□□□ 0.24
RFTN1-201ENST00000334133 TMEM65Q6PI78 240 aa16.58■□□□□ 0.24
RFTN1-201ENST00000334133 PNLDC1Q8NA58 520 aaKnown RBP16.58■□□□□ 0.24
RFTN1-201ENST00000334133 SCARB1Q8WTV0 552 aa16.58■□□□□ 0.24
RFTN1-201ENST00000334133 ZNF845Q96IR2 970 aaPredicted RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms