RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 ACSM1Q08AH1 577 aa14.15□□□□□ -0.14
SHOX-201ENST00000334060 TPBGQ13641 420 aa14.15□□□□□ -0.14
SHOX-201ENST00000334060 SPRNQ5BIV9 151 aa14.15□□□□□ -0.14
SHOX-201ENST00000334060 ZNF787Q6DD87 383 aa14.15□□□□□ -0.14
SHOX-201ENST00000334060 OR5AK2Q8NH90 309 aa14.15□□□□□ -0.14
SHOX-201ENST00000334060 ADAT3Q96EY9 351 aaPredicted RBP14.15□□□□□ -0.14
SHOX-201ENST00000334060 KCNS3Q9BQ31 491 aa14.15□□□□□ -0.14
SHOX-201ENST00000334060 TMEM204Q9BSN7 226 aa14.15□□□□□ -0.14
SHOX-201ENST00000334060 ESRP2Q9H6T0 727 aaKnown RBP14.15□□□□□ -0.14
SHOX-201ENST00000334060 A6NNC1 897 aa14.14□□□□□ -0.15
SHOX-201ENST00000334060 PIN1P1O15428 100 aa14.14□□□□□ -0.15
SHOX-201ENST00000334060 ICMTO60725 284 aa14.14□□□□□ -0.15
SHOX-201ENST00000334060 GPX5O75715 221 aa14.14□□□□□ -0.15
SHOX-201ENST00000334060 CD3EP07766 207 aa14.14□□□□□ -0.15
SHOX-201ENST00000334060 BMP4P12644 408 aa14.14□□□□□ -0.15
SHOX-201ENST00000334060 PRF1P14222 555 aa14.14□□□□□ -0.15
SHOX-201ENST00000334060 SELEP16581 610 aa14.14□□□□□ -0.15
SHOX-201ENST00000334060 FAHP16930 419 aa14.14□□□□□ -0.15
SHOX-201ENST00000334060 KRTAP10-9P60411 292 aa14.14□□□□□ -0.15
SHOX-201ENST00000334060 LSM3P62310 102 aaKnown RBP14.14□□□□□ -0.15
SHOX-201ENST00000334060 HOXA4Q00056 320 aaPredicted RBP14.14□□□□□ -0.15
SHOX-201ENST00000334060 CD300CQ08708 224 aa14.14□□□□□ -0.15
SHOX-201ENST00000334060 ADIPOQQ15848 244 aa14.14□□□□□ -0.15
SHOX-201ENST00000334060 ZNF704Q6ZNC4 412 aaPredicted RBP14.14□□□□□ -0.15
SHOX-201ENST00000334060 OR56B2PQ8NGI1 322 aa14.14□□□□□ -0.15
SHOX-201ENST00000334060 FCGR1BQ92637 280 aa14.14□□□□□ -0.15
SHOX-201ENST00000334060 FGF23Q9GZV9 251 aaPredicted RBP14.14□□□□□ -0.15
SHOX-201ENST00000334060 LIME1Q9H400 295 aa14.14□□□□□ -0.15
SHOX-201ENST00000334060 SLA2Q9H6Q3 261 aa14.14□□□□□ -0.15
SHOX-201ENST00000334060 DUSP13Q9UII6 198 aa14.14□□□□□ -0.15
SHOX-201ENST00000334060 RNF115Q9Y4L5 304 aa14.14□□□□□ -0.15
SHOX-201ENST00000334060 SMIM30A4D0T7 59 aa14.14□□□□□ -0.15
SHOX-201ENST00000334060 C3orf36Q3SXR2 165 aa14.14□□□□□ -0.15
SHOX-201ENST00000334060 ASCC1Q8N9N2 400 aaKnown RBP14.14□□□□□ -0.15
SHOX-201ENST00000334060 OR1J2Q8NGS2 313 aa14.14□□□□□ -0.15
SHOX-201ENST00000334060 FAM222BQ8WU58 562 aa14.14□□□□□ -0.15
SHOX-201ENST00000334060 AKAP1Q92667 903 aaKnown RBP eCLIP14.14□□□□□ -0.15
SHOX-201ENST00000334060 UFD1Q92890 307 aa14.14□□□□□ -0.15
SHOX-201ENST00000334060 YIPF6Q96EC8 236 aa14.14□□□□□ -0.15
SHOX-201ENST00000334060 ARPC5LQ9BPX5 153 aa14.14□□□□□ -0.15
SHOX-201ENST00000334060 USB1Q9BQ65 265 aaKnown RBP14.14□□□□□ -0.15
SHOX-201ENST00000334060 PLEKHB1Q9UF11 243 aaPredicted RBP14.14□□□□□ -0.15
SHOX-201ENST00000334060 ASH1LQ9NR48 2969 aaKnown RBP14.13□□□□□ -0.15
SHOX-201ENST00000334060 H0YL77 283 aa14.13□□□□□ -0.15
SHOX-201ENST00000334060 HLA-DPB1P04440 258 aa14.13□□□□□ -0.15
SHOX-201ENST00000334060 CD36P16671 472 aa14.13□□□□□ -0.15
SHOX-201ENST00000334060 GSK3AP49840 483 aa14.13□□□□□ -0.15
SHOX-201ENST00000334060 IFITM3Q01628 133 aa14.13□□□□□ -0.15
SHOX-201ENST00000334060 Q6ZR03 302 aa14.13□□□□□ -0.15
SHOX-201ENST00000334060 LYSMD2Q8IV50 215 aa14.13□□□□□ -0.15
SHOX-201ENST00000334060 OR14K1Q8NGZ2 314 aa14.13□□□□□ -0.15
SHOX-201ENST00000334060 SPSB4Q96A44 273 aa14.13□□□□□ -0.15
SHOX-201ENST00000334060 REPIN1Q9BWE0 567 aaKnown RBP14.13□□□□□ -0.15
SHOX-201ENST00000334060 OR10A2Q9H208 303 aa14.13□□□□□ -0.15
SHOX-201ENST00000334060 MSL2Q9HCI7 577 aa14.13□□□□□ -0.15
SHOX-201ENST00000334060 NDUFB11Q9NX14 153 aa14.13□□□□□ -0.15
SHOX-201ENST00000334060 EIF3KQ9UBQ5 218 aaKnown RBP14.13□□□□□ -0.15
SHOX-201ENST00000334060 ZNF221Q9UK13 617 aa14.13□□□□□ -0.15
SHOX-201ENST00000334060 SPG11Q96JI7 2443 aa14.13□□□□□ -0.15
SHOX-201ENST00000334060 CRYBB2P43320 205 aa14.13□□□□□ -0.15
SHOX-201ENST00000334060 CCR9P51686 369 aa14.13□□□□□ -0.15
SHOX-201ENST00000334060 CCDC58Q4VC31 144 aa14.13□□□□□ -0.15
SHOX-201ENST00000334060 RHBDD3Q9Y3P4 386 aa14.13□□□□□ -0.15
SHOX-201ENST00000334060 CACNA1DQ01668 2161 aa14.12□□□□□ -0.15
SHOX-201ENST00000334060 SYT7O43581 403 aa14.12□□□□□ -0.15
SHOX-201ENST00000334060 OR4A8P0C604 315 aa14.12□□□□□ -0.15
SHOX-201ENST00000334060 ALDH3B1P43353 468 aa14.12□□□□□ -0.15
SHOX-201ENST00000334060 BDH1Q02338 343 aa14.12□□□□□ -0.15
SHOX-201ENST00000334060 MST1LQ2TV78 715 aa14.12□□□□□ -0.15
SHOX-201ENST00000334060 ZNF672Q499Z4 452 aaPredicted RBP14.12□□□□□ -0.15
SHOX-201ENST00000334060 AGAP6Q5VW22 663 aa14.12□□□□□ -0.15
SHOX-201ENST00000334060 PGAP1Q75T13 922 aa14.12□□□□□ -0.15
SHOX-201ENST00000334060 OR51A2Q8NGJ7 313 aa14.12□□□□□ -0.15
SHOX-201ENST00000334060 SETD6Q8TBK2 473 aa14.12□□□□□ -0.15
SHOX-201ENST00000334060 NPRL2Q8WTW4 380 aa14.12□□□□□ -0.15
SHOX-201ENST00000334060 SPOCK3Q9BQ16 436 aa14.12□□□□□ -0.15
SHOX-201ENST00000334060 CENPOQ9BU64 300 aa14.12□□□□□ -0.15
SHOX-201ENST00000334060 CISD1Q9NZ45 108 aaKnown RBP14.12□□□□□ -0.15
SHOX-201ENST00000334060 GPR160Q9UJ42 338 aa14.12□□□□□ -0.15
SHOX-201ENST00000334060 ZNF281Q9Y2X9 895 aa14.12□□□□□ -0.15
SHOX-201ENST00000334060 APCP25054 2843 aa14.12□□□□□ -0.15
SHOX-201ENST00000334060 TRAV8-7A0A075B6U6 113 aa14.11□□□□□ -0.15
SHOX-201ENST00000334060 A0A0U1RQV5 110 aa14.11□□□□□ -0.15
SHOX-201ENST00000334060 CCRL2O00421 344 aa14.11□□□□□ -0.15
SHOX-201ENST00000334060 SC5DO75845 299 aa14.11□□□□□ -0.15
SHOX-201ENST00000334060 SOD3P08294 240 aa14.11□□□□□ -0.15
SHOX-201ENST00000334060 CCL1P22362 96 aa14.11□□□□□ -0.15
SHOX-201ENST00000334060 GLRXP35754 106 aa14.11□□□□□ -0.15
SHOX-201ENST00000334060 RGS7BPQ6MZT1 257 aaPredicted RBP14.11□□□□□ -0.15
SHOX-201ENST00000334060 MRPL21Q7Z2W9 205 aaKnown RBP14.11□□□□□ -0.15
SHOX-201ENST00000334060 PLPP7Q8NBV4 271 aa14.11□□□□□ -0.15
SHOX-201ENST00000334060 OR10AD1Q8NGE0 317 aa14.11□□□□□ -0.15
SHOX-201ENST00000334060 OR52H1Q8NGJ2 320 aa14.11□□□□□ -0.15
SHOX-201ENST00000334060 FGGYQ96C11 551 aa14.11□□□□□ -0.15
SHOX-201ENST00000334060 MRPL48Q96GC5 212 aaKnown RBP14.11□□□□□ -0.15
SHOX-201ENST00000334060 SLC30A2Q9BRI3 323 aa14.11□□□□□ -0.15
SHOX-201ENST00000334060 CHCHD6Q9BRQ6 235 aa14.11□□□□□ -0.15
SHOX-201ENST00000334060 NGBQ9NPG2 151 aa14.11□□□□□ -0.15
SHOX-201ENST00000334060 PIGLQ9Y2B2 252 aa14.11□□□□□ -0.15
SHOX-201ENST00000334060 RBMX2Q9Y388 322 aaKnown RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms