RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 FAM220AQ7Z4H9 259 aa11.8□□□□□ -0.52
LIMS1-201ENST00000332345 ELMOD2Q8IZ81 293 aa11.8□□□□□ -0.52
LIMS1-201ENST00000332345 MUC20Q8N307 709 aaPredicted RBP11.8□□□□□ -0.52
LIMS1-201ENST00000332345 SPICQ8N5J4 248 aa11.8□□□□□ -0.52
LIMS1-201ENST00000332345 ACBD7Q8N6N7 88 aa11.8□□□□□ -0.52
LIMS1-201ENST00000332345 OR51E1Q8TCB6 317 aa11.8□□□□□ -0.52
LIMS1-201ENST00000332345 CYGBQ8WWM9 190 aa11.8□□□□□ -0.52
LIMS1-201ENST00000332345 PIGCQ92535 297 aa11.8□□□□□ -0.52
LIMS1-201ENST00000332345 HIST1H2AAQ96QV6 131 aa11.8□□□□□ -0.52
LIMS1-201ENST00000332345 MICU1Q9BPX6 476 aa11.8□□□□□ -0.52
LIMS1-201ENST00000332345 PAPOLGQ9BWT3 736 aaKnown RBP11.8□□□□□ -0.52
LIMS1-201ENST00000332345 G6PC2Q9NQR9 355 aa11.8□□□□□ -0.52
LIMS1-201ENST00000332345 GPR84Q9NQS5 396 aa11.8□□□□□ -0.52
LIMS1-201ENST00000332345 UFSP2Q9NUQ7 469 aa11.8□□□□□ -0.52
LIMS1-201ENST00000332345 AASSQ9UDR5 926 aa11.8□□□□□ -0.52
LIMS1-201ENST00000332345 FN1P02751 2386 aaKnown RBP11.79□□□□□ -0.52
LIMS1-201ENST00000332345 ZNF816-ZNF321PA0A0X1KG74 233 aa11.79□□□□□ -0.52
LIMS1-201ENST00000332345 J3QRE1 110 aa11.79□□□□□ -0.52
LIMS1-201ENST00000332345 CRLF1O75462 422 aa11.79□□□□□ -0.52
LIMS1-201ENST00000332345 SRSF10O75494 262 aaKnown RBP11.79□□□□□ -0.52
LIMS1-201ENST00000332345 FSTL3O95633 263 aa11.79□□□□□ -0.52
LIMS1-201ENST00000332345 FADS2O95864 444 aaKnown RBP11.79□□□□□ -0.52
LIMS1-201ENST00000332345 CYB5R3P00387 301 aaPredicted RBP11.79□□□□□ -0.52
LIMS1-201ENST00000332345 IGHV2-5P01817 119 aa11.79□□□□□ -0.52
LIMS1-201ENST00000332345 TTRP02766 147 aa11.79□□□□□ -0.52
LIMS1-201ENST00000332345 PCMT1P22061 227 aa11.79□□□□□ -0.52
LIMS1-201ENST00000332345 CPT2P23786 658 aa11.79□□□□□ -0.52
LIMS1-201ENST00000332345 ACKR3P25106 362 aa11.79□□□□□ -0.52
LIMS1-201ENST00000332345 PMELP40967 661 aa11.79□□□□□ -0.52
LIMS1-201ENST00000332345 DVL1P1P54792 670 aaPredicted RBP11.79□□□□□ -0.52
LIMS1-201ENST00000332345 ZNF85Q03923 595 aa11.79□□□□□ -0.52
LIMS1-201ENST00000332345 SLC34A1Q06495 639 aa11.79□□□□□ -0.52
LIMS1-201ENST00000332345 MFGE8Q08431 387 aaPredicted RBP11.79□□□□□ -0.52
LIMS1-201ENST00000332345 MPPED2Q15777 294 aa11.79□□□□□ -0.52
LIMS1-201ENST00000332345 PRAMEF6Q5VXH4 476 aa11.79□□□□□ -0.52
LIMS1-201ENST00000332345 THAP5Q7Z6K1 395 aa11.79□□□□□ -0.52
LIMS1-201ENST00000332345 EGFL6Q8IUX8 553 aa11.79□□□□□ -0.52
LIMS1-201ENST00000332345 SETD9Q8NE22 299 aa11.79□□□□□ -0.52
LIMS1-201ENST00000332345 SEMA6DQ8NFY4 1073 aa11.79□□□□□ -0.52
LIMS1-201ENST00000332345 OR51F2Q8NH61 342 aa11.79□□□□□ -0.52
LIMS1-201ENST00000332345 PPP1R14AQ96A00 147 aa11.79□□□□□ -0.52
LIMS1-201ENST00000332345 LGALS12Q96DT0 336 aa11.79□□□□□ -0.52
LIMS1-201ENST00000332345 UBAP1Q9NZ09 502 aa11.79□□□□□ -0.52
LIMS1-201ENST00000332345 RNF7Q9UBF6 113 aa11.79□□□□□ -0.52
LIMS1-201ENST00000332345 GNG8Q9UK08 70 aa11.79□□□□□ -0.52
LIMS1-201ENST00000332345 CDC42EP3Q9UKI2 254 aa11.79□□□□□ -0.52
LIMS1-201ENST00000332345 PPIAL4EA0A075B759 164 aa11.78□□□□□ -0.52
LIMS1-201ENST00000332345 A6NLC8 198 aa11.78□□□□□ -0.52
LIMS1-201ENST00000332345 ZNF850A8MQ14 1090 aa11.78□□□□□ -0.52
LIMS1-201ENST00000332345 FAM157AC9JC47 383 aa11.78□□□□□ -0.52
LIMS1-201ENST00000332345 PPIAL4DF5H284 164 aa11.78□□□□□ -0.52
LIMS1-201ENST00000332345 FAM20BO75063 409 aa11.78□□□□□ -0.52
LIMS1-201ENST00000332345 DHRS3O75911 302 aa11.78□□□□□ -0.52
LIMS1-201ENST00000332345 IGLV3-1P01715 115 aa11.78□□□□□ -0.52
LIMS1-201ENST00000332345 MSMBP08118 114 aa11.78□□□□□ -0.52
LIMS1-201ENST00000332345 PPIAL4FP0DN26 164 aa11.78□□□□□ -0.52
LIMS1-201ENST00000332345 DBTP11182 482 aaKnown RBP11.78□□□□□ -0.52
LIMS1-201ENST00000332345 HOXB4P17483 251 aaPredicted RBP11.78□□□□□ -0.52
LIMS1-201ENST00000332345 ZNF91Q05481 1191 aa11.78□□□□□ -0.52
LIMS1-201ENST00000332345 RAB40BQ12829 278 aa11.78□□□□□ -0.52
LIMS1-201ENST00000332345 PRDX4Q13162 271 aa11.78□□□□□ -0.52
LIMS1-201ENST00000332345 IL18R1Q13478 541 aa11.78□□□□□ -0.52
LIMS1-201ENST00000332345 ZMYND11Q15326 602 aa11.78□□□□□ -0.52
LIMS1-201ENST00000332345 ZBTB37Q5TC79 503 aa11.78□□□□□ -0.52
LIMS1-201ENST00000332345 ZNF691Q5VV52 312 aa11.78□□□□□ -0.52
LIMS1-201ENST00000332345 KRT74Q7RTS7 529 aa11.78□□□□□ -0.52
LIMS1-201ENST00000332345 GLCCI1Q86VQ1 547 aa11.78□□□□□ -0.52
LIMS1-201ENST00000332345 RORBQ92753 470 aa11.78□□□□□ -0.52
LIMS1-201ENST00000332345 DVL3Q92997 716 aaPredicted RBP11.78□□□□□ -0.52
LIMS1-201ENST00000332345 FAM71F1Q96KD3 344 aaPredicted RBP11.78□□□□□ -0.52
LIMS1-201ENST00000332345 ADI1Q9BV57 179 aa11.78□□□□□ -0.52
LIMS1-201ENST00000332345 RTL8AQ9BWD3 113 aa11.78□□□□□ -0.52
LIMS1-201ENST00000332345 BEX2Q9BXY8 128 aa11.78□□□□□ -0.52
LIMS1-201ENST00000332345 SHARPINQ9H0F6 387 aa11.78□□□□□ -0.52
LIMS1-201ENST00000332345 TMEM165Q9HC07 324 aa11.78□□□□□ -0.52
LIMS1-201ENST00000332345 AMBNQ9NP70 447 aa11.78□□□□□ -0.52
LIMS1-201ENST00000332345 INPP5EQ9NRR6 644 aa11.78□□□□□ -0.52
LIMS1-201ENST00000332345 MRPS18AQ9NVS2 196 aaKnown RBP11.78□□□□□ -0.52
LIMS1-201ENST00000332345 C1orf123Q9NWV4 160 aa11.78□□□□□ -0.52
LIMS1-201ENST00000332345 LPAR3Q9UBY5 353 aa11.78□□□□□ -0.52
LIMS1-201ENST00000332345 PPIAL4AQ9Y536 164 aa11.78□□□□□ -0.52
LIMS1-201ENST00000332345 DOCK11Q5JSL3 2073 aa11.78□□□□□ -0.52
LIMS1-201ENST00000332345 TRAV20A0A0B4J274 112 aa11.77□□□□□ -0.53
LIMS1-201ENST00000332345 H0YAE9 185 aa11.77□□□□□ -0.53
LIMS1-201ENST00000332345 HNF1AP20823 631 aa11.77□□□□□ -0.53
LIMS1-201ENST00000332345 ACTA2P62736 377 aa11.77□□□□□ -0.53
LIMS1-201ENST00000332345 ACTG2P63267 376 aa11.77□□□□□ -0.53
LIMS1-201ENST00000332345 ADARB1P78563 741 aaKnown RBP11.77□□□□□ -0.53
LIMS1-201ENST00000332345 GALEQ14376 348 aa11.77□□□□□ -0.53
LIMS1-201ENST00000332345 KCNJ8Q15842 424 aa11.77□□□□□ -0.53
LIMS1-201ENST00000332345 CHRFAM7AQ494W8 412 aa11.77□□□□□ -0.53
LIMS1-201ENST00000332345 CDONQ4KMG0 1287 aa11.77□□□□□ -0.53
LIMS1-201ENST00000332345 TP53I3Q53FA7 332 aa11.77□□□□□ -0.53
LIMS1-201ENST00000332345 DOK3Q7L591 496 aa11.77□□□□□ -0.53
LIMS1-201ENST00000332345 CATSPERDQ86XM0 798 aa11.77□□□□□ -0.53
LIMS1-201ENST00000332345 ZDHHC23Q8IYP9 409 aa11.77□□□□□ -0.53
LIMS1-201ENST00000332345 CCDC54Q8NEL0 328 aa11.77□□□□□ -0.53
LIMS1-201ENST00000332345 OR5P3Q8WZ94 311 aa11.77□□□□□ -0.53
LIMS1-201ENST00000332345 TMEM186Q96B77 213 aa11.77□□□□□ -0.53
LIMS1-201ENST00000332345 ITPKCQ96DU7 683 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms