RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 LMX1BO60663 402 aa13.62□□□□□ -0.23
LRRC28-202ENST00000331450 LY6HO94772 140 aa13.62□□□□□ -0.23
LRRC28-202ENST00000331450 F12P00748 615 aaPredicted RBP13.62□□□□□ -0.23
LRRC28-202ENST00000331450 HLA-DPB1P04440 258 aa13.62□□□□□ -0.23
LRRC28-202ENST00000331450 FAHP16930 419 aa13.62□□□□□ -0.23
LRRC28-202ENST00000331450 MAP2K4P45985 399 aa13.62□□□□□ -0.23
LRRC28-202ENST00000331450 CDH15P55291 814 aa13.62□□□□□ -0.23
LRRC28-202ENST00000331450 CCL8P80075 99 aa13.62□□□□□ -0.23
LRRC28-202ENST00000331450 SPRNQ5BIV9 151 aa13.62□□□□□ -0.23
LRRC28-202ENST00000331450 TMEM42Q69YG0 159 aa13.62□□□□□ -0.23
LRRC28-202ENST00000331450 FTMTQ8N4E7 242 aa13.62□□□□□ -0.23
LRRC28-202ENST00000331450 ZNF676Q8N7Q3 588 aa13.62□□□□□ -0.23
LRRC28-202ENST00000331450 ZFP41Q8N8Y5 198 aa13.62□□□□□ -0.23
LRRC28-202ENST00000331450 OR2Z1Q8NG97 314 aa13.62□□□□□ -0.23
LRRC28-202ENST00000331450 OR51A4Q8NGJ6 313 aa13.62□□□□□ -0.23
LRRC28-202ENST00000331450 OR5AK2Q8NH90 309 aa13.62□□□□□ -0.23
LRRC28-202ENST00000331450 UBASH3BQ8TF42 649 aa13.62□□□□□ -0.23
LRRC28-202ENST00000331450 PGLYRP3Q96LB9 341 aa13.62□□□□□ -0.23
LRRC28-202ENST00000331450 ADAT1Q9BUB4 502 aaKnown RBP13.62□□□□□ -0.23
LRRC28-202ENST00000331450 PPP1R3EQ9H7J1 279 aa13.62□□□□□ -0.23
LRRC28-202ENST00000331450 BARX1Q9HBU1 254 aaPredicted RBP13.62□□□□□ -0.23
LRRC28-202ENST00000331450 ACOT13Q9NPJ3 140 aa13.62□□□□□ -0.23
LRRC28-202ENST00000331450 HHLA2Q9UM44 414 aa13.62□□□□□ -0.23
LRRC28-202ENST00000331450 NOP16Q9Y3C1 178 aaKnown RBP13.62□□□□□ -0.23
LRRC28-202ENST00000331450 PRRC2AP48634 2157 aaKnown RBP13.62□□□□□ -0.23
LRRC28-202ENST00000331450 USF3Q68DE3 2245 aa13.62□□□□□ -0.23
LRRC28-202ENST00000331450 PLPP2O43688 288 aa13.61□□□□□ -0.23
LRRC28-202ENST00000331450 GMDSO60547 372 aa13.61□□□□□ -0.23
LRRC28-202ENST00000331450 HPXP02790 462 aa13.61□□□□□ -0.23
LRRC28-202ENST00000331450 CD1AP06126 327 aa13.61□□□□□ -0.23
LRRC28-202ENST00000331450 ERCC1P07992 297 aaPredicted RBP13.61□□□□□ -0.23
LRRC28-202ENST00000331450 RPSAP08865 295 aaKnown RBP13.61□□□□□ -0.23
LRRC28-202ENST00000331450 ZNF12P17014 697 aa13.61□□□□□ -0.23
LRRC28-202ENST00000331450 CHN2P52757 468 aa13.61□□□□□ -0.23
LRRC28-202ENST00000331450 TNFAIP6P98066 277 aaPredicted RBP13.61□□□□□ -0.23
LRRC28-202ENST00000331450 EMX1Q04741 257 aaPredicted RBP13.61□□□□□ -0.23
LRRC28-202ENST00000331450 RIPPLY1Q0D2K3 151 aa13.61□□□□□ -0.23
LRRC28-202ENST00000331450 MED22Q15528 200 aa13.61□□□□□ -0.23
LRRC28-202ENST00000331450 TESK1Q15569 626 aa13.61□□□□□ -0.23
LRRC28-202ENST00000331450 TSTQ16762 297 aaKnown RBP13.61□□□□□ -0.23
LRRC28-202ENST00000331450 ZNF773Q6PK81 442 aa13.61□□□□□ -0.23
LRRC28-202ENST00000331450 DNM1P46Q6ZS02 220 aa13.61□□□□□ -0.23
LRRC28-202ENST00000331450 SPARTQ8N0X7 666 aa13.61□□□□□ -0.23
LRRC28-202ENST00000331450 DVL3Q92997 716 aaPredicted RBP13.61□□□□□ -0.23
LRRC28-202ENST00000331450 ITPKCQ96DU7 683 aa13.61□□□□□ -0.23
LRRC28-202ENST00000331450 PAPOLGQ9BWT3 736 aaKnown RBP13.61□□□□□ -0.23
LRRC28-202ENST00000331450 COMMD4Q9H0A8 199 aa13.61□□□□□ -0.23
LRRC28-202ENST00000331450 ISYNA1Q9NPH2 558 aa13.61□□□□□ -0.23
LRRC28-202ENST00000331450 IL19Q9UHD0 177 aa13.61□□□□□ -0.23
LRRC28-202ENST00000331450 PIGLQ9Y2B2 252 aa13.61□□□□□ -0.23
LRRC28-202ENST00000331450 MPC1Q9Y5U8 109 aa13.61□□□□□ -0.23
LRRC28-202ENST00000331450 DYSFO75923 2080 aa13.6□□□□□ -0.23
LRRC28-202ENST00000331450 F5H5P2 479 aa13.6□□□□□ -0.23
LRRC28-202ENST00000331450 H3BSH0 61 aa13.6□□□□□ -0.23
LRRC28-202ENST00000331450 TNFAIP8O95379 198 aa13.6□□□□□ -0.23
LRRC28-202ENST00000331450 PTBP3O95758 552 aaKnown RBP13.6□□□□□ -0.23
LRRC28-202ENST00000331450 PCMT1P22061 227 aa13.6□□□□□ -0.23
LRRC28-202ENST00000331450 CD200P41217 278 aa13.6□□□□□ -0.23
LRRC28-202ENST00000331450 PRDX4Q13162 271 aa13.6□□□□□ -0.23
LRRC28-202ENST00000331450 MAB21L1Q13394 359 aa13.6□□□□□ -0.23
LRRC28-202ENST00000331450 OR8G1Q15617 311 aa13.6□□□□□ -0.23
LRRC28-202ENST00000331450 NAV2Q8IVL1 2488 aa13.6□□□□□ -0.23
LRRC28-202ENST00000331450 SVOPQ8N4V2 548 aa13.6□□□□□ -0.23
LRRC28-202ENST00000331450 CELF2-AS1Q8N7Q2 184 aa13.6□□□□□ -0.23
LRRC28-202ENST00000331450 ITLN1Q8WWA0 313 aa13.6□□□□□ -0.23
LRRC28-202ENST00000331450 HPSE2Q8WWQ2 592 aa13.6□□□□□ -0.23
LRRC28-202ENST00000331450 C10orf35Q96D05 121 aa13.6□□□□□ -0.23
LRRC28-202ENST00000331450 MEGF10Q96KG7 1140 aa13.6□□□□□ -0.23
LRRC28-202ENST00000331450 OR2V2Q96R30 315 aa13.6□□□□□ -0.23
LRRC28-202ENST00000331450 FGF23Q9GZV9 251 aaPredicted RBP13.6□□□□□ -0.23
LRRC28-202ENST00000331450 SAP30LQ9HAJ7 183 aa13.6□□□□□ -0.23
LRRC28-202ENST00000331450 ENPP5Q9UJA9 477 aa13.6□□□□□ -0.23
LRRC28-202ENST00000331450 ZNF850A8MQ14 1090 aa13.59□□□□□ -0.23
LRRC28-202ENST00000331450 CELP19835 753 aa13.59□□□□□ -0.23
LRRC28-202ENST00000331450 TNFSF4P23510 183 aa13.59□□□□□ -0.23
LRRC28-202ENST00000331450 GNALP38405 381 aa13.59□□□□□ -0.23
LRRC28-202ENST00000331450 GATA4P43694 442 aa13.59□□□□□ -0.23
LRRC28-202ENST00000331450 ART1P52961 327 aa13.59□□□□□ -0.23
LRRC28-202ENST00000331450 RPS11P62280 158 aaKnown RBP eCLIP13.59□□□□□ -0.23
LRRC28-202ENST00000331450 MRPS11P82912 194 aaKnown RBP13.59□□□□□ -0.23
LRRC28-202ENST00000331450 SLC3A1Q07837 685 aa13.59□□□□□ -0.23
LRRC28-202ENST00000331450 MLLT11Q13015 90 aaPredicted RBP13.59□□□□□ -0.23
LRRC28-202ENST00000331450 PRSS57Q6UWY2 283 aa13.59□□□□□ -0.23
LRRC28-202ENST00000331450 ZNF367Q7RTV3 350 aa13.59□□□□□ -0.23
LRRC28-202ENST00000331450 SPERTQ8NA61 448 aa13.59□□□□□ -0.23
LRRC28-202ENST00000331450 PIGCQ92535 297 aa13.59□□□□□ -0.23
LRRC28-202ENST00000331450 GHSRQ92847 366 aa13.59□□□□□ -0.23
LRRC28-202ENST00000331450 ADAT3Q96EY9 351 aaPredicted RBP13.59□□□□□ -0.23
LRRC28-202ENST00000331450 OPALINQ96PE5 141 aa13.59□□□□□ -0.23
LRRC28-202ENST00000331450 CHST5Q9GZS9 411 aa13.59□□□□□ -0.23
LRRC28-202ENST00000331450 ZNF696Q9H7X3 374 aa13.59□□□□□ -0.23
LRRC28-202ENST00000331450 PLEKHA1Q9HB21 404 aa13.59□□□□□ -0.23
LRRC28-202ENST00000331450 ABCB9Q9NP78 766 aa13.59□□□□□ -0.23
LRRC28-202ENST00000331450 MYOZ1Q9NP98 299 aaPredicted RBP13.59□□□□□ -0.23
LRRC28-202ENST00000331450 ZNF275Q9NSD4 429 aaPredicted RBP13.59□□□□□ -0.23
LRRC28-202ENST00000331450 ZNF281Q9Y2X9 895 aa13.59□□□□□ -0.23
LRRC28-202ENST00000331450 TRBV5-5A0A0J9YX44 114 aa13.58□□□□□ -0.24
LRRC28-202ENST00000331450 LOC100289279A0A1B0GTE1 492 aa13.58□□□□□ -0.24
LRRC28-202ENST00000331450 PNMA8CA0A1B0GUJ8 204 aa13.58□□□□□ -0.24
LRRC28-202ENST00000331450 SSX4O60224 188 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms