RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 FAM3AP98173 230 aa16.06■□□□□ 0.16
CLSTN3-202ENST00000331148 SPEM2Q0P670 501 aa16.06■□□□□ 0.16
CLSTN3-202ENST00000331148 KIAA0141Q14154 515 aaPredicted RBP16.06■□□□□ 0.16
CLSTN3-202ENST00000331148 ACKR1Q16570 336 aa16.06■□□□□ 0.16
CLSTN3-202ENST00000331148 ACTBL2Q562R1 376 aa16.06■□□□□ 0.16
CLSTN3-202ENST00000331148 OPN5Q6U736 354 aa16.06■□□□□ 0.16
CLSTN3-202ENST00000331148 NUP54Q7Z3B4 507 aa16.06■□□□□ 0.16
CLSTN3-202ENST00000331148 UBALD2Q8IYN6 164 aa16.06■□□□□ 0.16
CLSTN3-202ENST00000331148 CADM4Q8NFZ8 388 aa16.06■□□□□ 0.16
CLSTN3-202ENST00000331148 OR9A4Q8NGU2 314 aa16.06■□□□□ 0.16
CLSTN3-202ENST00000331148 AKR7LQ8NHP1 331 aa16.06■□□□□ 0.16
CLSTN3-202ENST00000331148 TWSG1Q9GZX9 223 aa16.06■□□□□ 0.16
CLSTN3-202ENST00000331148 PCED1AQ9H1Q7 454 aa16.06■□□□□ 0.16
CLSTN3-202ENST00000331148 UFSP2Q9NUQ7 469 aa16.06■□□□□ 0.16
CLSTN3-202ENST00000331148 K7EPK0 472 aa16.05■□□□□ 0.16
CLSTN3-202ENST00000331148 SFTPBP07988 381 aa16.05■□□□□ 0.16
CLSTN3-202ENST00000331148 RNF224P0DH78 156 aa16.05■□□□□ 0.16
CLSTN3-202ENST00000331148 FCGR2CP31995 323 aa16.05■□□□□ 0.16
CLSTN3-202ENST00000331148 GPR3P46089 330 aa16.05■□□□□ 0.16
CLSTN3-202ENST00000331148 CDX1P47902 265 aaPredicted RBP16.05■□□□□ 0.16
CLSTN3-202ENST00000331148 UCP2P55851 309 aa16.05■□□□□ 0.16
CLSTN3-202ENST00000331148 RPL27P61353 136 aaKnown RBP16.05■□□□□ 0.16
CLSTN3-202ENST00000331148 BIKQ13323 160 aa16.05■□□□□ 0.16
CLSTN3-202ENST00000331148 SLC22A24Q8N4F4 322 aa16.05■□□□□ 0.16
CLSTN3-202ENST00000331148 FAM71E2Q8N5Q1 922 aa16.05■□□□□ 0.16
CLSTN3-202ENST00000331148 BAHD1Q8TBE0 780 aaPredicted RBP16.05■□□□□ 0.16
CLSTN3-202ENST00000331148 SLAMF9Q96A28 289 aa16.05■□□□□ 0.16
CLSTN3-202ENST00000331148 FGGYQ96C11 551 aa16.05■□□□□ 0.16
CLSTN3-202ENST00000331148 YPEL4Q96NS1 127 aa16.05■□□□□ 0.16
CLSTN3-202ENST00000331148 SMIM3Q9BZL3 60 aa16.05■□□□□ 0.16
CLSTN3-202ENST00000331148 CHST5Q9GZS9 411 aa16.05■□□□□ 0.16
CLSTN3-202ENST00000331148 EIF5A2Q9GZV4 153 aaKnown RBP16.05■□□□□ 0.16
CLSTN3-202ENST00000331148 VSX1Q9NZR4 365 aaPredicted RBP16.05■□□□□ 0.16
CLSTN3-202ENST00000331148 ARHGEF17Q96PE2 2063 aaPredicted RBP16.05■□□□□ 0.16
CLSTN3-202ENST00000331148 MPZL1O95297 269 aa16.05■□□□□ 0.16
CLSTN3-202ENST00000331148 HPGDP15428 266 aa16.05■□□□□ 0.16
CLSTN3-202ENST00000331148 P2RY4P51582 365 aa16.05■□□□□ 0.16
CLSTN3-202ENST00000331148 C1QL3Q5VWW1 255 aa16.05■□□□□ 0.16
CLSTN3-202ENST00000331148 HEPN1Q6WQI6 88 aa16.05■□□□□ 0.16
CLSTN3-202ENST00000331148 CNTNAP3Q9BZ76 1288 aa16.05■□□□□ 0.16
CLSTN3-202ENST00000331148 PTGES2Q9H7Z7 377 aa16.05■□□□□ 0.16
CLSTN3-202ENST00000331148 FAM212BQ9NTI7 297 aaPredicted RBP16.05■□□□□ 0.16
CLSTN3-202ENST00000331148 HDGFL3Q9Y3E1 203 aa16.05■□□□□ 0.16
CLSTN3-202ENST00000331148 C19orf67A6NJJ6 358 aa16.04■□□□□ 0.16
CLSTN3-202ENST00000331148 CELA2BP08218 269 aaPredicted RBP16.04■□□□□ 0.16
CLSTN3-202ENST00000331148 RPS2P15880 293 aaKnown RBP16.04■□□□□ 0.16
CLSTN3-202ENST00000331148 S100A2P29034 98 aa16.04■□□□□ 0.16
CLSTN3-202ENST00000331148 GNALP38405 381 aa16.04■□□□□ 0.16
CLSTN3-202ENST00000331148 EMP2P54851 167 aa16.04■□□□□ 0.16
CLSTN3-202ENST00000331148 RPS23P62266 143 aaKnown RBP16.04■□□□□ 0.16
CLSTN3-202ENST00000331148 ZNF616Q08AN1 781 aa16.04■□□□□ 0.16
CLSTN3-202ENST00000331148 HIST2H3AQ71DI3 136 aa16.04■□□□□ 0.16
CLSTN3-202ENST00000331148 MED25Q71SY5 747 aa16.04■□□□□ 0.16
CLSTN3-202ENST00000331148 CD300LFQ8TDQ1 290 aa16.04■□□□□ 0.16
CLSTN3-202ENST00000331148 PATE1Q8WXA2 126 aa16.04■□□□□ 0.16
CLSTN3-202ENST00000331148 MARS2Q96GW9 593 aaKnown RBP16.04■□□□□ 0.16
CLSTN3-202ENST00000331148 C14orf144Q96I85 54 aa16.04■□□□□ 0.16
CLSTN3-202ENST00000331148 SCGB3A2Q96PL1 93 aa16.04■□□□□ 0.16
CLSTN3-202ENST00000331148 OR10A5Q9H207 317 aa16.04■□□□□ 0.16
CLSTN3-202ENST00000331148 KIR2DS5A0A0G2JLQ3 304 aa16.03■□□□□ 0.16
CLSTN3-202ENST00000331148 A0A0G2JNG1 304 aa16.03■□□□□ 0.16
CLSTN3-202ENST00000331148 TMEM14DPA8MWL7 114 aa16.03■□□□□ 0.16
CLSTN3-202ENST00000331148 KIR2DS3K7RE56 304 aa16.03■□□□□ 0.16
CLSTN3-202ENST00000331148 CD38P28907 300 aa16.03■□□□□ 0.16
CLSTN3-202ENST00000331148 TMEM33P57088 247 aa16.03■□□□□ 0.16
CLSTN3-202ENST00000331148 RAB1AP62820 205 aa16.03■□□□□ 0.16
CLSTN3-202ENST00000331148 KIR2DS5Q14953 304 aa16.03■□□□□ 0.16
CLSTN3-202ENST00000331148 POMZP3Q6PJE2 187 aa16.03■□□□□ 0.16
CLSTN3-202ENST00000331148 COX15Q7KZN9 410 aa16.03■□□□□ 0.16
CLSTN3-202ENST00000331148 PNLDC1Q8NA58 520 aaKnown RBP16.03■□□□□ 0.16
CLSTN3-202ENST00000331148 OR10H5Q8NGA6 315 aa16.03■□□□□ 0.16
CLSTN3-202ENST00000331148 ZDHHC12Q96GR4 267 aa16.03■□□□□ 0.16
CLSTN3-202ENST00000331148 RHOVQ96L33 236 aa16.03■□□□□ 0.16
CLSTN3-202ENST00000331148 UBQLN4Q9NRR5 601 aa16.03■□□□□ 0.16
CLSTN3-202ENST00000331148 SIT1Q9Y3P8 196 aa16.03■□□□□ 0.16
CLSTN3-202ENST00000331148 A0A0A6YYD4 124 aa16.03■□□□□ 0.16
CLSTN3-202ENST00000331148 A0A1B0GV90 55 aa16.03■□□□□ 0.16
CLSTN3-202ENST00000331148 TMEM269A0A1B0GVZ9 245 aa16.03■□□□□ 0.16
CLSTN3-202ENST00000331148 C1orf61Q13536 156 aa16.03■□□□□ 0.16
CLSTN3-202ENST00000331148 TOMM34Q15785 309 aaPredicted RBP16.03■□□□□ 0.16
CLSTN3-202ENST00000331148 OR13G1Q8NGZ3 307 aa16.03■□□□□ 0.16
CLSTN3-202ENST00000331148 SLC25A43Q8WUT9 341 aaPredicted RBP16.03■□□□□ 0.16
CLSTN3-202ENST00000331148 DGAT2Q96PD7 388 aa16.03■□□□□ 0.16
CLSTN3-202ENST00000331148 CUTCQ9NTM9 273 aa16.03■□□□□ 0.16
CLSTN3-202ENST00000331148 FBLN5Q9UBX5 448 aa16.03■□□□□ 0.16
CLSTN3-202ENST00000331148 SLC5A6Q9Y289 635 aa16.03■□□□□ 0.16
CLSTN3-202ENST00000331148 SCDO00767 359 aa16.02■□□□□ 0.16
CLSTN3-202ENST00000331148 HCRTR1O43613 425 aa16.02■□□□□ 0.16
CLSTN3-202ENST00000331148 GMFGO60234 142 aa16.02■□□□□ 0.16
CLSTN3-202ENST00000331148 OR2C1O95371 312 aa16.02■□□□□ 0.16
CLSTN3-202ENST00000331148 CXCL12P48061 93 aa16.02■□□□□ 0.16
CLSTN3-202ENST00000331148 PLAC9Q5JTB6 97 aa16.02■□□□□ 0.16
CLSTN3-202ENST00000331148 ZNF574Q6ZN55 896 aaPredicted RBP16.02■□□□□ 0.16
CLSTN3-202ENST00000331148 LHFPL1Q86WI0 220 aa16.02■□□□□ 0.16
CLSTN3-202ENST00000331148 UBAC2Q8NBM4 344 aa16.02■□□□□ 0.16
CLSTN3-202ENST00000331148 OR5H2Q8NGV7 314 aa16.02■□□□□ 0.16
CLSTN3-202ENST00000331148 MAFAQ8NHW3 353 aaPredicted RBP16.02■□□□□ 0.16
CLSTN3-202ENST00000331148 SLC25A36Q96CQ1 311 aa16.02■□□□□ 0.16
CLSTN3-202ENST00000331148 CCDC3Q9BQI4 270 aa16.02■□□□□ 0.16
CLSTN3-202ENST00000331148 LPAR5Q9H1C0 372 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms