RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 MRPS17Q9Y2R5 130 aaKnown RBP12.59□□□□□ -0.39
EPHB3-201ENST00000330394 KLHDC2Q9Y2U9 406 aa12.59□□□□□ -0.39
EPHB3-201ENST00000330394 TRAPPC2LH3BP13 241 aa12.59□□□□□ -0.39
EPHB3-201ENST00000330394 AP4M1O00189 453 aa12.59□□□□□ -0.39
EPHB3-201ENST00000330394 CD63P08962 238 aa12.59□□□□□ -0.39
EPHB3-201ENST00000330394 SLC25A1P53007 311 aa12.59□□□□□ -0.39
EPHB3-201ENST00000330394 RPS4XP62701 263 aaKnown RBP12.59□□□□□ -0.39
EPHB3-201ENST00000330394 RAB1AP62820 205 aa12.59□□□□□ -0.39
EPHB3-201ENST00000330394 MESP2Q0VG99 397 aa12.59□□□□□ -0.39
EPHB3-201ENST00000330394 LHX8Q68G74 356 aa12.59□□□□□ -0.39
EPHB3-201ENST00000330394 PRSS54Q6PEW0 395 aa12.59□□□□□ -0.39
EPHB3-201ENST00000330394 RBMS3Q6XE24 437 aaKnown RBP12.59□□□□□ -0.39
EPHB3-201ENST00000330394 MISPQ8IVT2 679 aa12.59□□□□□ -0.39
EPHB3-201ENST00000330394 AP1S3Q96PC3 154 aa12.59□□□□□ -0.39
EPHB3-201ENST00000330394 LPAR3Q9UBY5 353 aa12.59□□□□□ -0.39
EPHB3-201ENST00000330394 ZNF638Q14966 1978 aaKnown RBP12.59□□□□□ -0.39
EPHB3-201ENST00000330394 EFSO43281 561 aa12.59□□□□□ -0.39
EPHB3-201ENST00000330394 ONECUT2O95948 504 aa12.59□□□□□ -0.39
EPHB3-201ENST00000330394 P04436 131 aa12.59□□□□□ -0.39
EPHB3-201ENST00000330394 GSTP1P09211 210 aaKnown RBP12.59□□□□□ -0.39
EPHB3-201ENST00000330394 TAS2R30P59541 319 aa12.59□□□□□ -0.39
EPHB3-201ENST00000330394 KCNIP4Q6PIL6 250 aa12.59□□□□□ -0.39
EPHB3-201ENST00000330394 DTWD2Q8NBA8 298 aa12.59□□□□□ -0.39
EPHB3-201ENST00000330394 TMEM37Q8WXS4 190 aa12.59□□□□□ -0.39
EPHB3-201ENST00000330394 ZNF816-ZNF321PA0A0X1KG74 233 aa12.58□□□□□ -0.39
EPHB3-201ENST00000330394 LINC01553A4QN01 128 aa12.58□□□□□ -0.39
EPHB3-201ENST00000330394 EIF4E2O60573 245 aaKnown RBP12.58□□□□□ -0.39
EPHB3-201ENST00000330394 ZFAND5O76080 213 aa12.58□□□□□ -0.39
EPHB3-201ENST00000330394 RCC1P18754 421 aaPredicted RBP12.58□□□□□ -0.39
EPHB3-201ENST00000330394 GFERP55789 205 aa12.58□□□□□ -0.39
EPHB3-201ENST00000330394 PSG6Q00889 435 aa12.58□□□□□ -0.39
EPHB3-201ENST00000330394 CLEC18BQ6UXF7 455 aa12.58□□□□□ -0.39
EPHB3-201ENST00000330394 ZNF321PQ8N8H1 164 aa12.58□□□□□ -0.39
EPHB3-201ENST00000330394 OR51F2Q8NH61 342 aa12.58□□□□□ -0.39
EPHB3-201ENST00000330394 REEP6Q96HR9 211 aa12.58□□□□□ -0.39
EPHB3-201ENST00000330394 LHX9Q9NQ69 397 aa12.58□□□□□ -0.39
EPHB3-201ENST00000330394 TMEM100Q9NV29 134 aa12.58□□□□□ -0.39
EPHB3-201ENST00000330394 TNFSF18Q9UNG2 199 aa12.58□□□□□ -0.39
EPHB3-201ENST00000330394 RAB27BO00194 218 aa12.58□□□□□ -0.4
EPHB3-201ENST00000330394 F10P00742 488 aa12.58□□□□□ -0.4
EPHB3-201ENST00000330394 OTX2P32243 289 aa12.58□□□□□ -0.4
EPHB3-201ENST00000330394 TSPO2Q5TGU0 170 aa12.58□□□□□ -0.4
EPHB3-201ENST00000330394 C16orf47Q6ZP98 133 aaPredicted RBP12.58□□□□□ -0.4
EPHB3-201ENST00000330394 GJC3Q8NFK1 279 aa12.58□□□□□ -0.4
EPHB3-201ENST00000330394 WSB1Q9Y6I7 421 aa12.58□□□□□ -0.4
EPHB3-201ENST00000330394 SFT2D2O95562 160 aa12.58□□□□□ -0.4
EPHB3-201ENST00000330394 YPEL5P62699 121 aa12.58□□□□□ -0.4
EPHB3-201ENST00000330394 ZIC1Q15915 447 aa12.58□□□□□ -0.4
EPHB3-201ENST00000330394 SPANXN5Q5MJ07 72 aa12.58□□□□□ -0.4
EPHB3-201ENST00000330394 FAM109BQ6ICB4 259 aaPredicted RBP12.58□□□□□ -0.4
EPHB3-201ENST00000330394 ZNF429Q86V71 674 aa12.58□□□□□ -0.4
EPHB3-201ENST00000330394 BAGE3Q86Y29 109 aa12.58□□□□□ -0.4
EPHB3-201ENST00000330394 BAGE2Q86Y30 109 aa12.58□□□□□ -0.4
EPHB3-201ENST00000330394 ZSCAN4Q8NAM6 433 aaPredicted RBP12.58□□□□□ -0.4
EPHB3-201ENST00000330394 LIPHQ8WWY8 451 aa12.58□□□□□ -0.4
EPHB3-201ENST00000330394 LHX4Q969G2 390 aa12.58□□□□□ -0.4
EPHB3-201ENST00000330394 LAT2Q9GZY6 243 aa12.58□□□□□ -0.4
EPHB3-201ENST00000330394 HMGB3O15347 200 aaKnown RBP12.58□□□□□ -0.4
EPHB3-201ENST00000330394 YIF1AO95070 293 aa12.58□□□□□ -0.4
EPHB3-201ENST00000330394 SYNGR4O95473 234 aa12.58□□□□□ -0.4
EPHB3-201ENST00000330394 AADACP22760 399 aa12.58□□□□□ -0.4
EPHB3-201ENST00000330394 HBG1P69891 147 aa12.58□□□□□ -0.4
EPHB3-201ENST00000330394 HBG2P69892 147 aa12.58□□□□□ -0.4
EPHB3-201ENST00000330394 BAXQ07812 192 aa12.58□□□□□ -0.4
EPHB3-201ENST00000330394 CD226Q15762 336 aa12.58□□□□□ -0.4
EPHB3-201ENST00000330394 PIK3IP1Q96FE7 263 aa12.58□□□□□ -0.4
EPHB3-201ENST00000330394 SMIM7Q9BQ49 75 aa12.58□□□□□ -0.4
EPHB3-201ENST00000330394 SEC11CQ9BY50 192 aa12.58□□□□□ -0.4
EPHB3-201ENST00000330394 SLC35B3Q9H1N7 401 aa12.58□□□□□ -0.4
EPHB3-201ENST00000330394 ANKRD10Q9NXR5 420 aa12.58□□□□□ -0.4
EPHB3-201ENST00000330394 MDC1Q14676 2089 aaKnown RBP12.57□□□□□ -0.4
EPHB3-201ENST00000330394 CDRT15L2A8MXV6 281 aa12.57□□□□□ -0.4
EPHB3-201ENST00000330394 MUC1P15941 1255 aaPredicted RBP12.57□□□□□ -0.4
EPHB3-201ENST00000330394 C2orf68Q2NKX9 166 aa12.57□□□□□ -0.4
EPHB3-201ENST00000330394 ZNF684Q5T5D7 378 aa12.57□□□□□ -0.4
EPHB3-201ENST00000330394 PARM1Q6UWI2 310 aa12.57□□□□□ -0.4
EPHB3-201ENST00000330394 ZNF707Q96C28 371 aaPredicted RBP12.57□□□□□ -0.4
EPHB3-201ENST00000330394 SHARPINQ9H0F6 387 aa12.57□□□□□ -0.4
EPHB3-201ENST00000330394 STRAPQ9Y3F4 350 aaKnown RBP12.57□□□□□ -0.4
EPHB3-201ENST00000330394 ESPL1Q14674 2120 aa12.57□□□□□ -0.4
EPHB3-201ENST00000330394 SOCS1O15524 211 aa12.57□□□□□ -0.4
EPHB3-201ENST00000330394 SPRY1O43609 319 aaPredicted RBP12.57□□□□□ -0.4
EPHB3-201ENST00000330394 TMEM127O75204 238 aa12.57□□□□□ -0.4
EPHB3-201ENST00000330394 HPP00738 406 aa12.57□□□□□ -0.4
EPHB3-201ENST00000330394 PDGFBP01127 241 aaPredicted RBP12.57□□□□□ -0.4
EPHB3-201ENST00000330394 SMIM6P0DI80 62 aa12.57□□□□□ -0.4
EPHB3-201ENST00000330394 IAPPP10997 89 aa12.57□□□□□ -0.4
EPHB3-201ENST00000330394 HOXB9P17482 250 aaPredicted RBP12.57□□□□□ -0.4
EPHB3-201ENST00000330394 CSNK1EP49674 416 aaKnown RBP12.57□□□□□ -0.4
EPHB3-201ENST00000330394 PDLIM3Q53GG5 364 aaPredicted RBP12.57□□□□□ -0.4
EPHB3-201ENST00000330394 MESTQ5EB52 335 aa12.57□□□□□ -0.4
EPHB3-201ENST00000330394 C6orf201Q7Z4U5 140 aa12.57□□□□□ -0.4
EPHB3-201ENST00000330394 RCL1Q9Y2P8 373 aaKnown RBP12.57□□□□□ -0.4
EPHB3-201ENST00000330394 RER1O15258 196 aa12.57□□□□□ -0.4
EPHB3-201ENST00000330394 TUSC2O75896 110 aa12.57□□□□□ -0.4
EPHB3-201ENST00000330394 FGF2P09038 288 aa12.57□□□□□ -0.4
EPHB3-201ENST00000330394 HIST1H1DP16402 221 aaKnown RBP12.57□□□□□ -0.4
EPHB3-201ENST00000330394 GPX8Q8TED1 209 aa12.57□□□□□ -0.4
EPHB3-201ENST00000330394 ROBO4Q8WZ75 1007 aa12.57□□□□□ -0.4
EPHB3-201ENST00000330394 POM121Q96HA1 1249 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms