RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 VITQ6UXI7 678 aa11.33□□□□□ -0.6
CCDC60-201ENST00000327554 ZNF101Q8IZC7 436 aa11.33□□□□□ -0.6
CCDC60-201ENST00000327554 OR5H2Q8NGV7 314 aa11.33□□□□□ -0.6
CCDC60-201ENST00000327554 OR10G6Q8NH81 332 aa11.33□□□□□ -0.6
CCDC60-201ENST00000327554 RNASE11Q8TAA1 199 aaKnown RBP11.33□□□□□ -0.6
CCDC60-201ENST00000327554 ADAT3Q96EY9 351 aaPredicted RBP11.33□□□□□ -0.6
CCDC60-201ENST00000327554 GINS3Q9BRX5 216 aa11.33□□□□□ -0.6
CCDC60-201ENST00000327554 DUSP15Q9H1R2 295 aaPredicted RBP11.33□□□□□ -0.6
CCDC60-201ENST00000327554 BCO1Q9HAY6 547 aa11.33□□□□□ -0.6
CCDC60-201ENST00000327554 TUBD1Q9UJT1 453 aa11.33□□□□□ -0.6
CCDC60-201ENST00000327554 TMEM269A0A1B0GVZ9 245 aa11.32□□□□□ -0.6
CCDC60-201ENST00000327554 A0A1B0GW64 132 aa11.32□□□□□ -0.6
CCDC60-201ENST00000327554 FKTNO75072 461 aa11.32□□□□□ -0.6
CCDC60-201ENST00000327554 HIST1H1DP16402 221 aaKnown RBP11.32□□□□□ -0.6
CCDC60-201ENST00000327554 PPM1AP35813 382 aa11.32□□□□□ -0.6
CCDC60-201ENST00000327554 GPR3P46089 330 aa11.32□□□□□ -0.6
CCDC60-201ENST00000327554 TMEM50BP56557 158 aa11.32□□□□□ -0.6
CCDC60-201ENST00000327554 ELOBQ15370 118 aa11.32□□□□□ -0.6
CCDC60-201ENST00000327554 TMEM156Q8N614 296 aa11.32□□□□□ -0.6
CCDC60-201ENST00000327554 MISP3Q96FF7 219 aa11.32□□□□□ -0.6
CCDC60-201ENST00000327554 NEU1Q99519 415 aa11.32□□□□□ -0.6
CCDC60-201ENST00000327554 SSX3Q99909 188 aa11.32□□□□□ -0.6
CCDC60-201ENST00000327554 PBDC1Q9BVG4 233 aa11.32□□□□□ -0.6
CCDC60-201ENST00000327554 TGIF2Q9GZN2 237 aa11.32□□□□□ -0.6
CCDC60-201ENST00000327554 HS3ST3B1Q9Y662 390 aa11.32□□□□□ -0.6
CCDC60-201ENST00000327554 CACNA1IQ9P0X4 2223 aa11.32□□□□□ -0.6
CCDC60-201ENST00000327554 ZNF724A8MTY0 619 aa11.32□□□□□ -0.6
CCDC60-201ENST00000327554 ZNF587BE7ETH6 402 aa11.32□□□□□ -0.6
CCDC60-201ENST00000327554 SDCBPO00560 298 aaPredicted RBP11.32□□□□□ -0.6
CCDC60-201ENST00000327554 CHRM2P08172 466 aa11.32□□□□□ -0.6
CCDC60-201ENST00000327554 PPP1CCP36873 323 aaKnown RBP11.32□□□□□ -0.6
CCDC60-201ENST00000327554 GNALP38405 381 aa11.32□□□□□ -0.6
CCDC60-201ENST00000327554 CD81P60033 236 aa11.32□□□□□ -0.6
CCDC60-201ENST00000327554 PDGFRLQ15198 375 aa11.32□□□□□ -0.6
CCDC60-201ENST00000327554 SOHLH1Q5JUK2 328 aa11.32□□□□□ -0.6
CCDC60-201ENST00000327554 C1orf140Q5VVS0 124 aa11.32□□□□□ -0.6
CCDC60-201ENST00000327554 LRRC18Q8N456 261 aa11.32□□□□□ -0.6
CCDC60-201ENST00000327554 GPBAR1Q8TDU6 330 aa11.32□□□□□ -0.6
CCDC60-201ENST00000327554 HPSE2Q8WWQ2 592 aa11.32□□□□□ -0.6
CCDC60-201ENST00000327554 LSM5Q9Y4Y9 91 aaKnown RBP11.32□□□□□ -0.6
CCDC60-201ENST00000327554 LTBP2Q14767 1821 aa11.32□□□□□ -0.6
CCDC60-201ENST00000327554 MED19A0JLT2 244 aaPredicted RBP11.31□□□□□ -0.6
CCDC60-201ENST00000327554 TSTD3H0UI37 97 aa11.31□□□□□ -0.6
CCDC60-201ENST00000327554 CXCR1P25024 350 aa11.31□□□□□ -0.6
CCDC60-201ENST00000327554 VIPR2P41587 438 aa11.31□□□□□ -0.6
CCDC60-201ENST00000327554 TDGQ13569 410 aa11.31□□□□□ -0.6
CCDC60-201ENST00000327554 PDZD11Q5EBL8 140 aa11.31□□□□□ -0.6
CCDC60-201ENST00000327554 OR9A4Q8NGU2 314 aa11.31□□□□□ -0.6
CCDC60-201ENST00000327554 SCARF2Q96GP6 870 aaPredicted RBP11.31□□□□□ -0.6
CCDC60-201ENST00000327554 C1orf147Q96MC9 270 aaPredicted RBP11.31□□□□□ -0.6
CCDC60-201ENST00000327554 JSRP1Q96MG2 331 aaPredicted RBP11.31□□□□□ -0.6
CCDC60-201ENST00000327554 RARRES2Q99969 163 aa11.31□□□□□ -0.6
CCDC60-201ENST00000327554 APOOQ9BUR5 198 aa11.31□□□□□ -0.6
CCDC60-201ENST00000327554 SH3BGRL3Q9H299 93 aa11.31□□□□□ -0.6
CCDC60-201ENST00000327554 PLEKHA2Q9HB19 425 aa11.31□□□□□ -0.6
CCDC60-201ENST00000327554 CA14Q9ULX7 337 aa11.31□□□□□ -0.6
CCDC60-201ENST00000327554 SRPK3Q9UPE1 567 aa11.31□□□□□ -0.6
CCDC60-201ENST00000327554 B3GALT5Q9Y2C3 310 aa11.31□□□□□ -0.6
CCDC60-201ENST00000327554 COA3Q9Y2R0 106 aaPredicted RBP11.31□□□□□ -0.6
CCDC60-201ENST00000327554 DNAH14Q0VDD8 3507 aa11.31□□□□□ -0.6
CCDC60-201ENST00000327554 PCNX3Q9H6A9 2034 aa11.31□□□□□ -0.6
CCDC60-201ENST00000327554 ARHGEF17Q96PE2 2063 aaPredicted RBP11.31□□□□□ -0.6
CCDC60-201ENST00000327554 ELOA3CA0A087WX78 387 aaPredicted RBP11.31□□□□□ -0.6
CCDC60-201ENST00000327554 A0A1W2PP55 124 aa11.31□□□□□ -0.6
CCDC60-201ENST00000327554 HIDE1A8MVS5 230 aa11.31□□□□□ -0.6
CCDC60-201ENST00000327554 PPP1R2P9O14990 202 aa11.31□□□□□ -0.6
CCDC60-201ENST00000327554 HCRTR1O43613 425 aa11.31□□□□□ -0.6
CCDC60-201ENST00000327554 WISP1O95388 367 aa11.31□□□□□ -0.6
CCDC60-201ENST00000327554 AMY2BP19961 511 aa11.31□□□□□ -0.6
CCDC60-201ENST00000327554 ERVFRD-1P60508 538 aa11.31□□□□□ -0.6
CCDC60-201ENST00000327554 ZNF117Q03924 483 aa11.31□□□□□ -0.6
CCDC60-201ENST00000327554 BIKQ13323 160 aa11.31□□□□□ -0.6
CCDC60-201ENST00000327554 UBE2V2Q15819 145 aa11.31□□□□□ -0.6
CCDC60-201ENST00000327554 CST6Q15828 149 aa11.31□□□□□ -0.6
CCDC60-201ENST00000327554 DCXRQ7Z4W1 244 aa11.31□□□□□ -0.6
CCDC60-201ENST00000327554 SUMF2Q8NBJ7 301 aa11.31□□□□□ -0.6
CCDC60-201ENST00000327554 EMG1Q92979 244 aaKnown RBP11.31□□□□□ -0.6
CCDC60-201ENST00000327554 RAB39BQ96DA2 213 aa11.31□□□□□ -0.6
CCDC60-201ENST00000327554 OR2M4Q96R27 311 aa11.31□□□□□ -0.6
CCDC60-201ENST00000327554 FOXQ1Q9C009 403 aa11.31□□□□□ -0.6
CCDC60-201ENST00000327554 OR11A1Q9GZK7 315 aa11.31□□□□□ -0.6
CCDC60-201ENST00000327554 OR10A5Q9H207 317 aa11.31□□□□□ -0.6
CCDC60-201ENST00000327554 SMOC1Q9H4F8 434 aa11.31□□□□□ -0.6
CCDC60-201ENST00000327554 C1orf123Q9NWV4 160 aa11.31□□□□□ -0.6
CCDC60-201ENST00000327554 STRAPQ9Y3F4 350 aaKnown RBP11.31□□□□□ -0.6
CCDC60-201ENST00000327554 OR5H15A6NDH6 313 aa11.3□□□□□ -0.6
CCDC60-201ENST00000327554 OR5H1A6NKK0 313 aa11.3□□□□□ -0.6
CCDC60-201ENST00000327554 A8MVM7 634 aa11.3□□□□□ -0.6
CCDC60-201ENST00000327554 MPIG6BO95866 241 aa11.3□□□□□ -0.6
CCDC60-201ENST00000327554 TTRP02766 147 aa11.3□□□□□ -0.6
CCDC60-201ENST00000327554 CTSBP07858 339 aa11.3□□□□□ -0.6
CCDC60-201ENST00000327554 APOBEC1P41238 236 aaKnown RBP11.3□□□□□ -0.6
CCDC60-201ENST00000327554 P2RY1P47900 373 aa11.3□□□□□ -0.6
CCDC60-201ENST00000327554 HIKESHIQ53FT3 197 aa11.3□□□□□ -0.6
CCDC60-201ENST00000327554 LBHQ53QV2 105 aaPredicted RBP11.3□□□□□ -0.6
CCDC60-201ENST00000327554 C2orf27AQ580R0 203 aa11.3□□□□□ -0.6
CCDC60-201ENST00000327554 CNKSR3Q6P9H4 555 aa11.3□□□□□ -0.6
CCDC60-201ENST00000327554 POMZP3Q6PJE2 187 aa11.3□□□□□ -0.6
CCDC60-201ENST00000327554 GRASPQ7Z6J2 395 aaPredicted RBP11.3□□□□□ -0.6
CCDC60-201ENST00000327554 LINC00346Q8IVM7 164 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms