RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 RFPL4AA6NLU0 287 aa18.78■□□□□ 0.6
LIMS2-201ENST00000324938 ZNF716A6NP11 495 aa18.78■□□□□ 0.6
LIMS2-201ENST00000324938 RFPL4AL1F8VTS6 287 aa18.78■□□□□ 0.6
LIMS2-201ENST00000324938 IL2RAP01589 272 aa18.78■□□□□ 0.6
LIMS2-201ENST00000324938 RFPL3SP0C7P2 107 aa18.78■□□□□ 0.6
LIMS2-201ENST00000324938 TMEM50BP56557 158 aa18.78■□□□□ 0.6
LIMS2-201ENST00000324938 CARD18P57730 90 aa18.78■□□□□ 0.6
LIMS2-201ENST00000324938 SRSF4Q08170 494 aaKnown RBP18.78■□□□□ 0.6
LIMS2-201ENST00000324938 NHLRC3Q5JS37 347 aa18.78■□□□□ 0.6
LIMS2-201ENST00000324938 DTX1Q86Y01 620 aa18.78■□□□□ 0.6
LIMS2-201ENST00000324938 GPR137CQ8N3F9 429 aa18.78■□□□□ 0.6
LIMS2-201ENST00000324938 C10orf35Q96D05 121 aa18.78■□□□□ 0.6
LIMS2-201ENST00000324938 TAAR9Q96RI9 348 aa18.78■□□□□ 0.6
LIMS2-201ENST00000324938 CST11Q9H112 138 aa18.78■□□□□ 0.6
LIMS2-201ENST00000324938 MFNGO00587 321 aa18.77■□□□□ 0.6
LIMS2-201ENST00000324938 CD8AP01732 235 aa18.77■□□□□ 0.6
LIMS2-201ENST00000324938 PPP3CBP16298 524 aa18.77■□□□□ 0.6
LIMS2-201ENST00000324938 HOXD11P31277 338 aaPredicted RBP18.77■□□□□ 0.6
LIMS2-201ENST00000324938 SORDQ00796 357 aa18.77■□□□□ 0.6
LIMS2-201ENST00000324938 ZNF528Q3MIS6 628 aa18.77■□□□□ 0.6
LIMS2-201ENST00000324938 FAHD2BQ6P2I3 314 aaPredicted RBP18.77■□□□□ 0.6
LIMS2-201ENST00000324938 RAB11FIP2Q7L804 512 aa18.77■□□□□ 0.6
LIMS2-201ENST00000324938 MARVELD3Q96A59 401 aa18.77■□□□□ 0.6
LIMS2-201ENST00000324938 FAHD2AQ96GK7 314 aa18.77■□□□□ 0.6
LIMS2-201ENST00000324938 ADGRG7Q96K78 797 aa18.77■□□□□ 0.6
LIMS2-201ENST00000324938 P4HTMQ9NXG6 502 aa18.77■□□□□ 0.6
LIMS2-201ENST00000324938 NOP16Q9Y3C1 178 aaKnown RBP18.77■□□□□ 0.6
LIMS2-201ENST00000324938 MRPS18CQ9Y3D5 142 aaKnown RBP18.77■□□□□ 0.6
LIMS2-201ENST00000324938 RTTNQ86VV8 2226 aa18.77■□□□□ 0.6
LIMS2-201ENST00000324938 OR2AT4A6NND4 320 aa18.77■□□□□ 0.6
LIMS2-201ENST00000324938 RP2O75695 350 aa18.77■□□□□ 0.6
LIMS2-201ENST00000324938 IFNA6P05013 189 aa18.77■□□□□ 0.6
LIMS2-201ENST00000324938 DBHP09172 617 aa18.77■□□□□ 0.6
LIMS2-201ENST00000324938 NAT2P11245 290 aa18.77■□□□□ 0.6
LIMS2-201ENST00000324938 RPA2P15927 270 aa18.77■□□□□ 0.6
LIMS2-201ENST00000324938 FAHP16930 419 aa18.77■□□□□ 0.6
LIMS2-201ENST00000324938 CRYGSP22914 178 aa18.77■□□□□ 0.6
LIMS2-201ENST00000324938 PTGFRP43088 359 aa18.77■□□□□ 0.6
LIMS2-201ENST00000324938 RPS27AP62979 156 aaKnown RBP18.77■□□□□ 0.6
LIMS2-201ENST00000324938 GK2Q14410 553 aaPredicted RBP18.77■□□□□ 0.6
LIMS2-201ENST00000324938 RAB35Q15286 201 aa18.77■□□□□ 0.6
LIMS2-201ENST00000324938 UBE2V2Q15819 145 aa18.77■□□□□ 0.6
LIMS2-201ENST00000324938 ABLIM2Q6H8Q1 611 aa18.77■□□□□ 0.6
LIMS2-201ENST00000324938 FAM89BQ8N5H3 189 aa18.77■□□□□ 0.6
LIMS2-201ENST00000324938 OR4K15Q8NH41 348 aa18.77■□□□□ 0.6
LIMS2-201ENST00000324938 DDA1Q9BW61 102 aa18.77■□□□□ 0.6
LIMS2-201ENST00000324938 DEPPQ9NTK1 212 aa18.77■□□□□ 0.6
LIMS2-201ENST00000324938 LOC100509620A0A075B734 347 aa18.76■□□□□ 0.59
LIMS2-201ENST00000324938 TRAV14DV4A0A0A6YYC5 116 aa18.76■□□□□ 0.59
LIMS2-201ENST00000324938 MTRF1O75570 445 aaKnown RBP18.76■□□□□ 0.59
LIMS2-201ENST00000324938 LIPCP11150 499 aa18.76■□□□□ 0.59
LIMS2-201ENST00000324938 PPP1R1AQ13522 171 aa18.76■□□□□ 0.59
LIMS2-201ENST00000324938 ACTBL2Q562R1 376 aa18.76■□□□□ 0.59
LIMS2-201ENST00000324938 PCNPQ8WW12 178 aaKnown RBP18.76■□□□□ 0.59
LIMS2-201ENST00000324938 ZNF775Q96BV0 537 aaPredicted RBP18.76■□□□□ 0.59
LIMS2-201ENST00000324938 ARL6Q9H0F7 186 aa18.76■□□□□ 0.59
LIMS2-201ENST00000324938 OR10A2Q9H208 303 aa18.76■□□□□ 0.59
LIMS2-201ENST00000324938 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.76■□□□□ 0.59
LIMS2-201ENST00000324938 CXCL13O43927 109 aa18.76■□□□□ 0.59
LIMS2-201ENST00000324938 PMP2P02689 132 aa18.76■□□□□ 0.59
LIMS2-201ENST00000324938 CST2P09228 141 aa18.76■□□□□ 0.59
LIMS2-201ENST00000324938 NTF4P34130 210 aa18.76■□□□□ 0.59
LIMS2-201ENST00000324938 CYB561P49447 251 aa18.76■□□□□ 0.59
LIMS2-201ENST00000324938 TOR2AQ5JU69 321 aa18.76■□□□□ 0.59
LIMS2-201ENST00000324938 COMMD7Q86VX2 200 aa18.76■□□□□ 0.59
LIMS2-201ENST00000324938 ZBTB44Q8NCP5 570 aa18.76■□□□□ 0.59
LIMS2-201ENST00000324938 OR52H1Q8NGJ2 320 aa18.76■□□□□ 0.59
LIMS2-201ENST00000324938 OR2V1Q8NHB1 315 aa18.76■□□□□ 0.59
LIMS2-201ENST00000324938 NPRL2Q8WTW4 380 aa18.76■□□□□ 0.59
LIMS2-201ENST00000324938 ARHGAP5-AS1Q96IT6 56 aa18.76■□□□□ 0.59
LIMS2-201ENST00000324938 SPRY4Q9C004 299 aa18.76■□□□□ 0.59
LIMS2-201ENST00000324938 ARRDC1-AS1Q9H2J1 176 aa18.76■□□□□ 0.59
LIMS2-201ENST00000324938 TMEM38BQ9NVV0 291 aa18.76■□□□□ 0.59
LIMS2-201ENST00000324938 KIF25Q9UIL4 384 aa18.76■□□□□ 0.59
LIMS2-201ENST00000324938 PIGLQ9Y2B2 252 aa18.76■□□□□ 0.59
LIMS2-201ENST00000324938 PCDHGA1Q9Y5H4 931 aa18.76■□□□□ 0.59
LIMS2-201ENST00000324938 CCDC187A0A096LP49 1063 aa18.75■□□□□ 0.59
LIMS2-201ENST00000324938 C9orf170A2RU37 121 aa18.75■□□□□ 0.59
LIMS2-201ENST00000324938 SGCEO43556 437 aa18.75■□□□□ 0.59
LIMS2-201ENST00000324938 B3GALNT1O75752 331 aa18.75■□□□□ 0.59
LIMS2-201ENST00000324938 RAD51DO75771 328 aa18.75■□□□□ 0.59
LIMS2-201ENST00000324938 HLA-GP17693 338 aa18.75■□□□□ 0.59
LIMS2-201ENST00000324938 MICBQ29980 383 aa18.75■□□□□ 0.59
LIMS2-201ENST00000324938 WIPI1Q5MNZ9 446 aaPredicted RBP18.75■□□□□ 0.59
LIMS2-201ENST00000324938 VAX1Q5SQQ9 334 aa18.75■□□□□ 0.59
LIMS2-201ENST00000324938 SFRP5Q5T4F7 317 aa18.75■□□□□ 0.59
LIMS2-201ENST00000324938 DRAM2Q6UX65 266 aa18.75■□□□□ 0.59
LIMS2-201ENST00000324938 HOGA1Q86XE5 327 aa18.75■□□□□ 0.59
LIMS2-201ENST00000324938 OR5D18Q8NGL1 313 aa18.75■□□□□ 0.59
LIMS2-201ENST00000324938 CPT1CQ8TCG5 803 aa18.75■□□□□ 0.59
LIMS2-201ENST00000324938 MITD1Q8WV92 249 aa18.75■□□□□ 0.59
LIMS2-201ENST00000324938 PSMF1Q92530 271 aa18.75■□□□□ 0.59
LIMS2-201ENST00000324938 OCSTAMPQ9BR26 566 aa18.75■□□□□ 0.59
LIMS2-201ENST00000324938 FOXI3A8MTJ6 420 aaPredicted RBP18.74■□□□□ 0.59
LIMS2-201ENST00000324938 STMND1H3BQB6 276 aa18.74■□□□□ 0.59
LIMS2-201ENST00000324938 SYNGR3O43761 229 aa18.74■□□□□ 0.59
LIMS2-201ENST00000324938 RRASP10301 218 aa18.74■□□□□ 0.59
LIMS2-201ENST00000324938 SNAI3Q3KNW1 292 aa18.74■□□□□ 0.59
LIMS2-201ENST00000324938 DMRTC1Q5HYR2 192 aa18.74■□□□□ 0.59
LIMS2-201ENST00000324938 LIN54Q6MZP7 749 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms