RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 PLA2G3Q9NZ20 509 aa12.47□□□□□ -0.41
VRK3-201ENST00000316763 GLTPQ9NZD2 209 aa12.47□□□□□ -0.41
VRK3-201ENST00000316763 DKKL1Q9UK85 242 aa12.47□□□□□ -0.41
VRK3-201ENST00000316763 FXYD6-FXYD2A0A087WZ82 144 aa12.47□□□□□ -0.41
VRK3-201ENST00000316763 RPS10-NUDT3A0A1W2PQS6 291 aa12.47□□□□□ -0.41
VRK3-201ENST00000316763 PINLYPA6NC86 204 aa12.47□□□□□ -0.41
VRK3-201ENST00000316763 OR5H15A6NDH6 313 aa12.47□□□□□ -0.41
VRK3-201ENST00000316763 RP2O75695 350 aa12.47□□□□□ -0.41
VRK3-201ENST00000316763 VAMP5O95183 116 aa12.47□□□□□ -0.41
VRK3-201ENST00000316763 CFDP00746 253 aaPredicted RBP12.47□□□□□ -0.41
VRK3-201ENST00000316763 CHRM2P08172 466 aa12.47□□□□□ -0.41
VRK3-201ENST00000316763 RFPL3SP0C7P2 107 aa12.47□□□□□ -0.41
VRK3-201ENST00000316763 MPZP25189 248 aa12.47□□□□□ -0.41
VRK3-201ENST00000316763 CX3CR1P49238 355 aa12.47□□□□□ -0.41
VRK3-201ENST00000316763 AP2S1P53680 142 aaPredicted RBP12.47□□□□□ -0.41
VRK3-201ENST00000316763 LSM6P62312 80 aaKnown RBP12.47□□□□□ -0.41
VRK3-201ENST00000316763 CXADRP78310 365 aa12.47□□□□□ -0.41
VRK3-201ENST00000316763 MFAP5Q13361 173 aa12.47□□□□□ -0.41
VRK3-201ENST00000316763 UNC119Q13432 240 aa12.47□□□□□ -0.41
VRK3-201ENST00000316763 C2orf68Q2NKX9 166 aa12.47□□□□□ -0.41
VRK3-201ENST00000316763 TMUB2Q71RG4 321 aa12.47□□□□□ -0.41
VRK3-201ENST00000316763 DOK3Q7L591 496 aa12.47□□□□□ -0.41
VRK3-201ENST00000316763 COMMD7Q86VX2 200 aa12.47□□□□□ -0.41
VRK3-201ENST00000316763 ZNF101Q8IZC7 436 aa12.47□□□□□ -0.41
VRK3-201ENST00000316763 OR8B12Q8NGG6 310 aa12.47□□□□□ -0.41
VRK3-201ENST00000316763 SLC6A7Q99884 636 aa12.47□□□□□ -0.41
VRK3-201ENST00000316763 FXYD6Q9H0Q3 95 aa12.47□□□□□ -0.41
VRK3-201ENST00000316763 ARPC5O15511 151 aa12.46□□□□□ -0.42
VRK3-201ENST00000316763 PPP3CBP16298 524 aa12.46□□□□□ -0.42
VRK3-201ENST00000316763 TBPP20226 339 aa12.46□□□□□ -0.42
VRK3-201ENST00000316763 CSNK1A1P48729 337 aa12.46□□□□□ -0.42
VRK3-201ENST00000316763 B3GALT5-AS1P59052 145 aa12.46□□□□□ -0.42
VRK3-201ENST00000316763 UBE2MP61081 183 aaKnown RBP12.46□□□□□ -0.42
VRK3-201ENST00000316763 SGCAQ16586 387 aa12.46□□□□□ -0.42
VRK3-201ENST00000316763 HYAL4Q2M3T9 481 aa12.46□□□□□ -0.42
VRK3-201ENST00000316763 C1QTNF12Q5T7M4 302 aa12.46□□□□□ -0.42
VRK3-201ENST00000316763 ATPAF1Q5TC12 328 aaPredicted RBP12.46□□□□□ -0.42
VRK3-201ENST00000316763 RAET1LQ5VY80 246 aa12.46□□□□□ -0.42
VRK3-201ENST00000316763 OR2M7Q8NG81 312 aa12.46□□□□□ -0.42
VRK3-201ENST00000316763 OR10R2Q8NGX6 335 aa12.46□□□□□ -0.42
VRK3-201ENST00000316763 HAS2Q92819 552 aa12.46□□□□□ -0.42
VRK3-201ENST00000316763 PIGQQ9BRB3 760 aa12.46□□□□□ -0.42
VRK3-201ENST00000316763 GPR84Q9NQS5 396 aa12.46□□□□□ -0.42
VRK3-201ENST00000316763 KCNN3Q9UGI6 736 aa12.46□□□□□ -0.42
VRK3-201ENST00000316763 KIF25Q9UIL4 384 aa12.46□□□□□ -0.42
VRK3-201ENST00000316763 BOKQ9UMX3 212 aaPredicted RBP12.46□□□□□ -0.42
VRK3-201ENST00000316763 MRPS28Q9Y2Q9 187 aaKnown RBP12.46□□□□□ -0.42
VRK3-201ENST00000316763 CNTRLQ7Z7A1 2325 aa12.45□□□□□ -0.42
VRK3-201ENST00000316763 TMEM14DPA8MWL7 114 aa12.45□□□□□ -0.42
VRK3-201ENST00000316763 RER1O15258 196 aa12.45□□□□□ -0.42
VRK3-201ENST00000316763 RAMP1O60894 148 aa12.45□□□□□ -0.42
VRK3-201ENST00000316763 MSR1P21757 451 aa12.45□□□□□ -0.42
VRK3-201ENST00000316763 CCL1P22362 96 aa12.45□□□□□ -0.42
VRK3-201ENST00000316763 CSNK2A1P68400 391 aaPredicted RBP12.45□□□□□ -0.42
VRK3-201ENST00000316763 FGL1Q08830 312 aa12.45□□□□□ -0.42
VRK3-201ENST00000316763 HLXQ14774 488 aaPredicted RBP12.45□□□□□ -0.42
VRK3-201ENST00000316763 DCAF12L2Q5VW00 463 aa12.45□□□□□ -0.42
VRK3-201ENST00000316763 LIN54Q6MZP7 749 aa12.45□□□□□ -0.42
VRK3-201ENST00000316763 LPCAT3Q6P1A2 487 aa12.45□□□□□ -0.42
VRK3-201ENST00000316763 FAM57BQ71RH2 274 aa12.45□□□□□ -0.42
VRK3-201ENST00000316763 SULF2Q8IWU5 870 aa12.45□□□□□ -0.42
VRK3-201ENST00000316763 ZDHHC22Q8N966 263 aa12.45□□□□□ -0.42
VRK3-201ENST00000316763 FDCSPQ8NFU4 85 aa12.45□□□□□ -0.42
VRK3-201ENST00000316763 KCNG3Q8TAE7 436 aa12.45□□□□□ -0.42
VRK3-201ENST00000316763 WDR89Q96FK6 387 aaPredicted RBP12.45□□□□□ -0.42
VRK3-201ENST00000316763 FAM71F1Q96KD3 344 aaPredicted RBP12.45□□□□□ -0.42
VRK3-201ENST00000316763 PNRC2Q9NPJ4 139 aaKnown RBP12.45□□□□□ -0.42
VRK3-201ENST00000316763 MGAQ8IWI9 3026 aa12.45□□□□□ -0.42
VRK3-201ENST00000316763 NPIPA2E9PIF3 369 aa12.45□□□□□ -0.42
VRK3-201ENST00000316763 NPIPA3F8WFD2 350 aa12.45□□□□□ -0.42
VRK3-201ENST00000316763 NME2P1O60361 137 aa12.45□□□□□ -0.42
VRK3-201ENST00000316763 CSN2P05814 226 aa12.45□□□□□ -0.42
VRK3-201ENST00000316763 SP1P08047 785 aa12.45□□□□□ -0.42
VRK3-201ENST00000316763 HCKP08631 526 aa12.45□□□□□ -0.42
VRK3-201ENST00000316763 UBBP0CG47 229 aa12.45□□□□□ -0.42
VRK3-201ENST00000316763 ABOP16442 354 aa12.45□□□□□ -0.42
VRK3-201ENST00000316763 NME2P22392 152 aa12.45□□□□□ -0.42
VRK3-201ENST00000316763 ENPP1P22413 925 aa12.45□□□□□ -0.42
VRK3-201ENST00000316763 CTSSP25774 331 aa12.45□□□□□ -0.42
VRK3-201ENST00000316763 CD34P28906 385 aa12.45□□□□□ -0.42
VRK3-201ENST00000316763 AGTR1P30556 359 aa12.45□□□□□ -0.42
VRK3-201ENST00000316763 H3F3AP84243 136 aa12.45□□□□□ -0.42
VRK3-201ENST00000316763 NKPD1Q17RQ9 610 aa12.45□□□□□ -0.42
VRK3-201ENST00000316763 TOR2AQ5JU69 321 aa12.45□□□□□ -0.42
VRK3-201ENST00000316763 GLIPR1L1Q6UWM5 242 aa12.45□□□□□ -0.42
VRK3-201ENST00000316763 CD163Q86VB7 1156 aa12.45□□□□□ -0.42
VRK3-201ENST00000316763 GJC3Q8NFK1 279 aa12.45□□□□□ -0.42
VRK3-201ENST00000316763 STEAP2Q8NFT2 490 aa12.45□□□□□ -0.42
VRK3-201ENST00000316763 OR4S1Q8NGB4 309 aa12.45□□□□□ -0.42
VRK3-201ENST00000316763 CMBLQ96DG6 245 aa12.45□□□□□ -0.42
VRK3-201ENST00000316763 PGAM5Q96HS1 289 aa12.45□□□□□ -0.42
VRK3-201ENST00000316763 HES7Q9BYE0 225 aa12.45□□□□□ -0.42
VRK3-201ENST00000316763 ARL6Q9H0F7 186 aa12.45□□□□□ -0.42
VRK3-201ENST00000316763 TPRP12270 2363 aaKnown RBP12.44□□□□□ -0.42
VRK3-201ENST00000316763 OR14I1A6ND48 311 aa12.44□□□□□ -0.42
VRK3-201ENST00000316763 RFPL4AA6NLU0 287 aa12.44□□□□□ -0.42
VRK3-201ENST00000316763 RFPL4AL1F8VTS6 287 aa12.44□□□□□ -0.42
VRK3-201ENST00000316763 CEACAM4O75871 244 aa12.44□□□□□ -0.42
VRK3-201ENST00000316763 PDGFAP04085 211 aa12.44□□□□□ -0.42
VRK3-201ENST00000316763 IFNA6P05013 189 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms