RNA–Protein interactions for RNA: ENST00000311487.9

HMGA1-201, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-201ENST00000311487 TNK1Q13470 666 aa15.56■□□□□ 0.08
HMGA1-201ENST00000311487 ZNF718Q3SXZ3 478 aa15.56■□□□□ 0.08
HMGA1-201ENST00000311487 MUC15Q8N387 334 aa15.56■□□□□ 0.08
HMGA1-201ENST00000311487 CHPT1Q8WUD6 406 aa15.56■□□□□ 0.08
HMGA1-201ENST00000311487 GHSRQ92847 366 aa15.56■□□□□ 0.08
HMGA1-201ENST00000311487 KCTD7Q96MP8 289 aa15.56■□□□□ 0.08
HMGA1-201ENST00000311487 PLK3Q9H4B4 646 aa15.56■□□□□ 0.08
HMGA1-201ENST00000311487 PLEKHF2Q9H8W4 249 aa15.56■□□□□ 0.08
HMGA1-201ENST00000311487 MSL2Q9HCI7 577 aa15.56■□□□□ 0.08
HMGA1-201ENST00000311487 FLNBO75369 2602 aaKnown RBP15.56■□□□□ 0.08
HMGA1-201ENST00000311487 APCP25054 2843 aa15.56■□□□□ 0.08
HMGA1-201ENST00000311487 VPS13CQ709C8 3753 aa15.56■□□□□ 0.08
HMGA1-201ENST00000311487 ICMTO60725 284 aa15.55■□□□□ 0.08
HMGA1-201ENST00000311487 NAT2P11245 290 aa15.55■□□□□ 0.08
HMGA1-201ENST00000311487 ACKR3P25106 362 aa15.55■□□□□ 0.08
HMGA1-201ENST00000311487 CD40LGP29965 261 aa15.55■□□□□ 0.08
HMGA1-201ENST00000311487 RORCP51449 518 aa15.55■□□□□ 0.08
HMGA1-201ENST00000311487 CDK5R1Q15078 307 aa15.55■□□□□ 0.08
HMGA1-201ENST00000311487 RGS21Q2M5E4 152 aa15.55■□□□□ 0.08
HMGA1-201ENST00000311487 DCDC5Q6ZRR9 648 aa15.55■□□□□ 0.08
HMGA1-201ENST00000311487 OR5AK2Q8NH90 309 aa15.55■□□□□ 0.08
HMGA1-201ENST00000311487 MRPL24Q96A35 216 aaKnown RBP15.55■□□□□ 0.08
HMGA1-201ENST00000311487 ORAI1Q96D31 301 aa15.55■□□□□ 0.08
HMGA1-201ENST00000311487 TMED9Q9BVK6 235 aa15.55■□□□□ 0.08
HMGA1-201ENST00000311487 SMURF1Q9HCE7 757 aa15.55■□□□□ 0.08
HMGA1-201ENST00000311487 A0A1B0GTI1 187 aa15.55■□□□□ 0.08
HMGA1-201ENST00000311487 LOC107986453A0A1B0GWG9 222 aa15.55■□□□□ 0.08
HMGA1-201ENST00000311487 A0A1W2PPK0 400 aa15.55■□□□□ 0.08
HMGA1-201ENST00000311487 ANKRD61A6NGH8 418 aa15.55■□□□□ 0.08
HMGA1-201ENST00000311487 GGT3PA6NGU5 568 aa15.55■□□□□ 0.08
HMGA1-201ENST00000311487 CTDSP2O14595 271 aa15.55■□□□□ 0.08
HMGA1-201ENST00000311487 TIMM8AO60220 97 aaPredicted RBP15.55■□□□□ 0.08
HMGA1-201ENST00000311487 HLA-DPB1P04440 258 aa15.55■□□□□ 0.08
HMGA1-201ENST00000311487 CLEC2LP0C7M8 214 aa15.55■□□□□ 0.08
HMGA1-201ENST00000311487 APOBEC3AP31941 199 aaPredicted RBP15.55■□□□□ 0.08
HMGA1-201ENST00000311487 GSK3AP49840 483 aa15.55■□□□□ 0.08
HMGA1-201ENST00000311487 MXD1Q05195 221 aa15.55■□□□□ 0.08
HMGA1-201ENST00000311487 MST1LQ2TV78 715 aa15.55■□□□□ 0.08
HMGA1-201ENST00000311487 RPL22L1Q6P5R6 122 aaKnown RBP15.55■□□□□ 0.08
HMGA1-201ENST00000311487 CENPSQ8N2Z9 138 aa15.55■□□□□ 0.08
HMGA1-201ENST00000311487 OR56B2PQ8NGI1 322 aa15.55■□□□□ 0.08
HMGA1-201ENST00000311487 RGP1Q92546 391 aaPredicted RBP15.55■□□□□ 0.08
HMGA1-201ENST00000311487 SLC25A46Q96AG3 418 aa15.55■□□□□ 0.08
HMGA1-201ENST00000311487 DHRS9Q9BPW9 319 aa15.55■□□□□ 0.08
HMGA1-201ENST00000311487 REPIN1Q9BWE0 567 aaKnown RBP15.55■□□□□ 0.08
HMGA1-201ENST00000311487 TAAR3PQ9P1P4 343 aa15.55■□□□□ 0.08
HMGA1-201ENST00000311487 UNC79Q9P2D8 2635 aa15.54■□□□□ 0.08
HMGA1-201ENST00000311487 XRCC2O43543 280 aa15.54■□□□□ 0.08
HMGA1-201ENST00000311487 ETV6P41212 452 aa15.54■□□□□ 0.08
HMGA1-201ENST00000311487 SOX2P48431 317 aa15.54■□□□□ 0.08
HMGA1-201ENST00000311487 TGM4P49221 684 aa15.54■□□□□ 0.08
HMGA1-201ENST00000311487 KLF3P57682 345 aaPredicted RBP15.54■□□□□ 0.08
HMGA1-201ENST00000311487 USF3Q68DE3 2245 aa15.54■□□□□ 0.08
HMGA1-201ENST00000311487 UNQ6126/PRO20091Q6UXV3 157 aa15.54■□□□□ 0.08
HMGA1-201ENST00000311487 GSTK1Q9Y2Q3 226 aa15.54■□□□□ 0.08
HMGA1-201ENST00000311487 ITPR2Q14571 2701 aa15.53■□□□□ 0.08
HMGA1-201ENST00000311487 GABRPO00591 440 aa15.53■□□□□ 0.08
HMGA1-201ENST00000311487 SYT7O43581 403 aa15.53■□□□□ 0.08
HMGA1-201ENST00000311487 ZNF250P15622 560 aa15.53■□□□□ 0.08
HMGA1-201ENST00000311487 FAHP16930 419 aa15.53■□□□□ 0.08
HMGA1-201ENST00000311487 SDC2P34741 201 aa15.53■□□□□ 0.08
HMGA1-201ENST00000311487 ZNF45Q02386 682 aa15.53■□□□□ 0.08
HMGA1-201ENST00000311487 GPR50Q13585 617 aa15.53■□□□□ 0.08
HMGA1-201ENST00000311487 DMKNQ6E0U4 476 aaPredicted RBP15.53■□□□□ 0.08
HMGA1-201ENST00000311487 CCDC190Q86UF4 302 aa15.53■□□□□ 0.08
HMGA1-201ENST00000311487 PARP16Q8N5Y8 322 aa15.53■□□□□ 0.08
HMGA1-201ENST00000311487 HAVCR1Q96D42 359 aa15.53■□□□□ 0.08
HMGA1-201ENST00000311487 SMIM19Q96E16 107 aa15.53■□□□□ 0.08
HMGA1-201ENST00000311487 TPK1Q9H3S4 243 aa15.53■□□□□ 0.08
HMGA1-201ENST00000311487 ZNF442Q9H7R0 627 aa15.53■□□□□ 0.08
HMGA1-201ENST00000311487 PURGQ9UJV8 347 aaKnown RBP15.53■□□□□ 0.08
HMGA1-201ENST00000311487 hCG_38984A0A1B0GV85 526 aa15.53■□□□□ 0.08
HMGA1-201ENST00000311487 H0YL77 283 aa15.53■□□□□ 0.08
HMGA1-201ENST00000311487 OGG1O15527 345 aa15.53■□□□□ 0.08
HMGA1-201ENST00000311487 CD8AP01732 235 aa15.53■□□□□ 0.08
HMGA1-201ENST00000311487 RPS23P62266 143 aaKnown RBP15.53■□□□□ 0.08
HMGA1-201ENST00000311487 NKPD1Q17RQ9 610 aa15.53■□□□□ 0.08
HMGA1-201ENST00000311487 MBNL2Q5VZF2 373 aaKnown RBP15.53■□□□□ 0.08
HMGA1-201ENST00000311487 FDX2Q6P4F2 183 aa15.53■□□□□ 0.08
HMGA1-201ENST00000311487 FBXW12Q6X9E4 464 aa15.53■□□□□ 0.08
HMGA1-201ENST00000311487 FBXL14Q8N1E6 418 aa15.53■□□□□ 0.08
HMGA1-201ENST00000311487 PGLYRP3Q96LB9 341 aa15.53■□□□□ 0.08
HMGA1-201ENST00000311487 MOB1AQ9H8S9 216 aa15.53■□□□□ 0.08
HMGA1-201ENST00000311487 SP140LQ9H930 580 aa15.53■□□□□ 0.08
HMGA1-201ENST00000311487 PIGLQ9Y2B2 252 aa15.53■□□□□ 0.08
HMGA1-201ENST00000311487 RHBDD3Q9Y3P4 386 aa15.53■□□□□ 0.08
HMGA1-201ENST00000311487 A0A0U1RQV5 110 aa15.52■□□□□ 0.07
HMGA1-201ENST00000311487 A0A1B0GVI7 797 aa15.52■□□□□ 0.07
HMGA1-201ENST00000311487 CD300LBA8K4G0 201 aa15.52■□□□□ 0.07
HMGA1-201ENST00000311487 CA6P23280 308 aa15.52■□□□□ 0.07
HMGA1-201ENST00000311487 CDKN1AP38936 164 aa15.52■□□□□ 0.07
HMGA1-201ENST00000311487 CCDC58Q4VC31 144 aa15.52■□□□□ 0.07
HMGA1-201ENST00000311487 OR10AD1Q8NGE0 317 aa15.52■□□□□ 0.07
HMGA1-201ENST00000311487 SPSB4Q96A44 273 aa15.52■□□□□ 0.07
HMGA1-201ENST00000311487 COX4I2Q96KJ9 171 aa15.52■□□□□ 0.07
HMGA1-201ENST00000311487 COMMD4Q9H0A8 199 aa15.52■□□□□ 0.07
HMGA1-201ENST00000311487 FAIMQ9NVQ4 179 aa15.52■□□□□ 0.07
HMGA1-201ENST00000311487 DSCAMO60469 2012 aa15.52■□□□□ 0.07
HMGA1-201ENST00000311487 MAP1AP78559 2803 aaPredicted RBP15.52■□□□□ 0.07
HMGA1-201ENST00000311487 UPK1BO75841 260 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms