RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 CLVS2Q5SYC1 327 aa10.15□□□□□ -0.78
PTPN2-201ENST00000309660 DCAF12Q5T6F0 453 aa10.15□□□□□ -0.78
PTPN2-201ENST00000309660 LYZL4Q96KX0 146 aa10.15□□□□□ -0.78
PTPN2-201ENST00000309660 NECAB3Q96P71 396 aaPredicted RBP10.15□□□□□ -0.78
PTPN2-201ENST00000309660 PHB2Q99623 299 aa10.15□□□□□ -0.78
PTPN2-201ENST00000309660 OR10A2Q9H208 303 aa10.15□□□□□ -0.78
PTPN2-201ENST00000309660 LGALS8O00214 317 aa10.15□□□□□ -0.79
PTPN2-201ENST00000309660 JMJD7P0C870 316 aa10.15□□□□□ -0.79
PTPN2-201ENST00000309660 RRASP10301 218 aa10.15□□□□□ -0.79
PTPN2-201ENST00000309660 MGMTP16455 207 aa10.15□□□□□ -0.79
PTPN2-201ENST00000309660 GDF1P27539 372 aa10.15□□□□□ -0.79
PTPN2-201ENST00000309660 TMEM50BP56557 158 aa10.15□□□□□ -0.79
PTPN2-201ENST00000309660 MLF1P58340 268 aa10.15□□□□□ -0.79
PTPN2-201ENST00000309660 UBE2V2Q15819 145 aa10.15□□□□□ -0.79
PTPN2-201ENST00000309660 SNAI3Q3KNW1 292 aa10.15□□□□□ -0.79
PTPN2-201ENST00000309660 LYG2Q86SG7 212 aa10.15□□□□□ -0.79
PTPN2-201ENST00000309660 CSNK2A3Q8NEV1 391 aa10.15□□□□□ -0.79
PTPN2-201ENST00000309660 OR14K1Q8NGZ2 314 aa10.15□□□□□ -0.79
PTPN2-201ENST00000309660 ALX4Q9H161 411 aaPredicted RBP10.15□□□□□ -0.79
PTPN2-201ENST00000309660 DNAJC13O75165 2243 aa10.14□□□□□ -0.79
PTPN2-201ENST00000309660 A0A087WZY1 265 aa10.14□□□□□ -0.79
PTPN2-201ENST00000309660 TRAV14DV4A0A0A6YYC5 116 aa10.14□□□□□ -0.79
PTPN2-201ENST00000309660 C9orf170A2RU37 121 aa10.14□□□□□ -0.79
PTPN2-201ENST00000309660 NTN3O00634 580 aaPredicted RBP10.14□□□□□ -0.79
PTPN2-201ENST00000309660 YKT6O15498 198 aa10.14□□□□□ -0.79
PTPN2-201ENST00000309660 H3F3AP84243 136 aa10.14□□□□□ -0.79
PTPN2-201ENST00000309660 ZFP36L1Q07352 338 aaKnown RBP10.14□□□□□ -0.79
PTPN2-201ENST00000309660 HIST3H3Q16695 136 aa10.14□□□□□ -0.79
PTPN2-201ENST00000309660 NHLRC3Q5JS37 347 aa10.14□□□□□ -0.79
PTPN2-201ENST00000309660 FAM209AQ5JX71 171 aa10.14□□□□□ -0.79
PTPN2-201ENST00000309660 ZNF774Q6NX45 483 aa10.14□□□□□ -0.79
PTPN2-201ENST00000309660 NAXDQ8IW45 347 aa10.14□□□□□ -0.79
PTPN2-201ENST00000309660 TMEM105Q8N8V8 129 aa10.14□□□□□ -0.79
PTPN2-201ENST00000309660 OR5M8Q8NGP6 311 aa10.14□□□□□ -0.79
PTPN2-201ENST00000309660 OR5H2Q8NGV7 314 aa10.14□□□□□ -0.79
PTPN2-201ENST00000309660 M1APQ8TC57 530 aa10.14□□□□□ -0.79
PTPN2-201ENST00000309660 RBPMSQ93062 196 aaKnown RBP10.14□□□□□ -0.79
PTPN2-201ENST00000309660 MRGPRFQ96AM1 343 aa10.14□□□□□ -0.79
PTPN2-201ENST00000309660 FBXO17Q96EF6 278 aa10.14□□□□□ -0.79
PTPN2-201ENST00000309660 SLX1AQ9BQ83 275 aa10.14□□□□□ -0.79
PTPN2-201ENST00000309660 TMPRSS13Q9BYE2 586 aa10.14□□□□□ -0.79
PTPN2-201ENST00000309660 LOXL2Q9Y4K0 774 aa10.14□□□□□ -0.79
PTPN2-201ENST00000309660 DOCK7Q96N67 2140 aa10.14□□□□□ -0.79
PTPN2-201ENST00000309660 CCDC187A0A096LP49 1063 aa10.14□□□□□ -0.79
PTPN2-201ENST00000309660 RFPL4AA6NLU0 287 aa10.14□□□□□ -0.79
PTPN2-201ENST00000309660 HMSDA8MTL9 139 aa10.14□□□□□ -0.79
PTPN2-201ENST00000309660 RFPL4AL1F8VTS6 287 aa10.14□□□□□ -0.79
PTPN2-201ENST00000309660 KNG1P01042 644 aa10.14□□□□□ -0.79
PTPN2-201ENST00000309660 CHRM2P08172 466 aa10.14□□□□□ -0.79
PTPN2-201ENST00000309660 PTGFRP43088 359 aa10.14□□□□□ -0.79
PTPN2-201ENST00000309660 RAC1P63000 192 aa10.14□□□□□ -0.79
PTPN2-201ENST00000309660 ZMYND11Q15326 602 aa10.14□□□□□ -0.79
PTPN2-201ENST00000309660 FOXRED2Q8IWF2 684 aa10.14□□□□□ -0.79
PTPN2-201ENST00000309660 OR56B1Q8NGI3 324 aa10.14□□□□□ -0.79
PTPN2-201ENST00000309660 SDHAF2Q9NX18 166 aa10.14□□□□□ -0.79
PTPN2-201ENST00000309660 TCFL5Q9UL49 500 aa10.14□□□□□ -0.79
PTPN2-201ENST00000309660 VAMP5O95183 116 aa10.13□□□□□ -0.79
PTPN2-201ENST00000309660 ZNF205O95201 554 aa10.13□□□□□ -0.79
PTPN2-201ENST00000309660 ONECUT2O95948 504 aa10.13□□□□□ -0.79
PTPN2-201ENST00000309660 CCNOP22674 350 aa10.13□□□□□ -0.79
PTPN2-201ENST00000309660 DLSTP36957 453 aa10.13□□□□□ -0.79
PTPN2-201ENST00000309660 RGS19P49795 217 aa10.13□□□□□ -0.79
PTPN2-201ENST00000309660 LUMP51884 338 aaPredicted RBP10.13□□□□□ -0.79
PTPN2-201ENST00000309660 SPINK14Q6IE38 97 aa10.13□□□□□ -0.79
PTPN2-201ENST00000309660 EHFQ9NZC4 300 aa10.13□□□□□ -0.79
PTPN2-201ENST00000309660 PFDN2Q9UHV9 154 aa10.13□□□□□ -0.79
PTPN2-201ENST00000309660 TECTAO75443 2155 aa10.13□□□□□ -0.79
PTPN2-201ENST00000309660 KANTRA0A1W2PQU2 76 aa10.13□□□□□ -0.79
PTPN2-201ENST00000309660 SGCEO43556 437 aa10.13□□□□□ -0.79
PTPN2-201ENST00000309660 SPRY1O43609 319 aaPredicted RBP10.13□□□□□ -0.79
PTPN2-201ENST00000309660 DHRS3O75911 302 aa10.13□□□□□ -0.79
PTPN2-201ENST00000309660 NMBP08949 121 aa10.13□□□□□ -0.79
PTPN2-201ENST00000309660 FKBP2P26885 142 aaKnown RBP10.13□□□□□ -0.79
PTPN2-201ENST00000309660 SNU13P55769 128 aaKnown RBP10.13□□□□□ -0.79
PTPN2-201ENST00000309660 MTCP1P56278 107 aa10.13□□□□□ -0.79
PTPN2-201ENST00000309660 LSM6P62312 80 aaKnown RBP10.13□□□□□ -0.79
PTPN2-201ENST00000309660 DHODHQ02127 395 aa10.13□□□□□ -0.79
PTPN2-201ENST00000309660 BRICD5Q6PL45 260 aa10.13□□□□□ -0.79
PTPN2-201ENST00000309660 AAED1Q7RTV5 226 aa10.13□□□□□ -0.79
PTPN2-201ENST00000309660 C6orf201Q7Z4U5 140 aa10.13□□□□□ -0.79
PTPN2-201ENST00000309660 SLC25A42Q86VD7 318 aa10.13□□□□□ -0.79
PTPN2-201ENST00000309660 GPR137CQ8N3F9 429 aa10.13□□□□□ -0.79
PTPN2-201ENST00000309660 FBXW5Q969U6 566 aa10.13□□□□□ -0.79
PTPN2-201ENST00000309660 SPTSSAQ969W0 71 aa10.13□□□□□ -0.79
PTPN2-201ENST00000309660 ZNF845Q96IR2 970 aaPredicted RBP10.13□□□□□ -0.79
PTPN2-201ENST00000309660 ZNF75AQ96N20 296 aa10.13□□□□□ -0.79
PTPN2-201ENST00000309660 VRK1Q99986 396 aaPredicted RBP10.13□□□□□ -0.79
PTPN2-201ENST00000309660 ARRDC1-AS1Q9H2J1 176 aa10.13□□□□□ -0.79
PTPN2-201ENST00000309660 ARPC4-TTLL3A0A0A6YYG9 625 aa10.13□□□□□ -0.79
PTPN2-201ENST00000309660 SCGNO76038 276 aa10.13□□□□□ -0.79
PTPN2-201ENST00000309660 CD63P08962 238 aa10.13□□□□□ -0.79
PTPN2-201ENST00000309660 PGAM2P15259 253 aa10.13□□□□□ -0.79
PTPN2-201ENST00000309660 ZBTB25P24278 435 aa10.13□□□□□ -0.79
PTPN2-201ENST00000309660 Q0VFX4 171 aa10.13□□□□□ -0.79
PTPN2-201ENST00000309660 ACER2Q5QJU3 275 aa10.13□□□□□ -0.79
PTPN2-201ENST00000309660 UNQ6126/PRO20091Q6UXV3 157 aa10.13□□□□□ -0.79
PTPN2-201ENST00000309660 TIPARPQ7Z3E1 657 aaKnown RBP10.13□□□□□ -0.79
PTPN2-201ENST00000309660 PPP1R32Q7Z5V6 425 aa10.13□□□□□ -0.79
PTPN2-201ENST00000309660 CDH26Q8IXH8 852 aa10.13□□□□□ -0.79
PTPN2-201ENST00000309660 ZIC4Q8N9L1 334 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms