RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 DEFB126Q9BYW3 111 aa11.3□□□□□ -0.6
RETREG3-201ENST00000309428 SLC5A7Q9GZV3 580 aa11.3□□□□□ -0.6
RETREG3-201ENST00000309428 RAB33BQ9H082 229 aa11.3□□□□□ -0.6
RETREG3-201ENST00000309428 OR51B6Q9H340 312 aa11.3□□□□□ -0.6
RETREG3-201ENST00000309428 C9orf170A2RU37 121 aa11.3□□□□□ -0.6
RETREG3-201ENST00000309428 OR4C45A6NMZ5 311 aa11.3□□□□□ -0.6
RETREG3-201ENST00000309428 HSPB6O14558 160 aa11.3□□□□□ -0.6
RETREG3-201ENST00000309428 ABOP16442 354 aa11.3□□□□□ -0.6
RETREG3-201ENST00000309428 ALDH3B1P43353 468 aa11.3□□□□□ -0.6
RETREG3-201ENST00000309428 F2RL1P55085 397 aa11.3□□□□□ -0.6
RETREG3-201ENST00000309428 PJVKQ0ZLH3 352 aa11.3□□□□□ -0.6
RETREG3-201ENST00000309428 PDCD1Q15116 288 aa11.3□□□□□ -0.6
RETREG3-201ENST00000309428 SLC35D3Q5M8T2 416 aa11.3□□□□□ -0.6
RETREG3-201ENST00000309428 BMPERQ8N8U9 685 aa11.3□□□□□ -0.6
RETREG3-201ENST00000309428 SLC38A9Q8NBW4 561 aa11.3□□□□□ -0.6
RETREG3-201ENST00000309428 AKR7LQ8NHP1 331 aa11.3□□□□□ -0.6
RETREG3-201ENST00000309428 THRSPQ92748 146 aa11.3□□□□□ -0.6
RETREG3-201ENST00000309428 CTHRC1Q96CG8 243 aa11.3□□□□□ -0.6
RETREG3-201ENST00000309428 LMF2Q9BU23 707 aaKnown RBP11.3□□□□□ -0.6
RETREG3-201ENST00000309428 ALKBH4Q9NXW9 302 aa11.3□□□□□ -0.6
RETREG3-201ENST00000309428 DOCK10Q96BY6 2186 aa11.3□□□□□ -0.6
RETREG3-201ENST00000309428 PTPRSQ13332 1948 aa11.3□□□□□ -0.6
RETREG3-201ENST00000309428 A0A1W2PPE2 198 aa11.29□□□□□ -0.6
RETREG3-201ENST00000309428 C1QL1O75973 258 aa11.29□□□□□ -0.6
RETREG3-201ENST00000309428 GLP1RP43220 463 aa11.29□□□□□ -0.6
RETREG3-201ENST00000309428 HOXA1P49639 335 aaPredicted RBP11.29□□□□□ -0.6
RETREG3-201ENST00000309428 PTCRAQ6ISU1 281 aaPredicted RBP11.29□□□□□ -0.6
RETREG3-201ENST00000309428 DMRTA2Q96SC8 542 aa11.29□□□□□ -0.6
RETREG3-201ENST00000309428 NXT1Q9UKK6 140 aaKnown RBP11.29□□□□□ -0.6
RETREG3-201ENST00000309428 WIF1Q9Y5W5 379 aa11.29□□□□□ -0.6
RETREG3-201ENST00000309428 MST1P26927 711 aa11.29□□□□□ -0.6
RETREG3-201ENST00000309428 TAGLN2P37802 199 aaKnown RBP11.29□□□□□ -0.6
RETREG3-201ENST00000309428 SRYQ05066 204 aa11.29□□□□□ -0.6
RETREG3-201ENST00000309428 OGFOD3Q6PK18 319 aa11.29□□□□□ -0.6
RETREG3-201ENST00000309428 BRICD5Q6PL45 260 aa11.29□□□□□ -0.6
RETREG3-201ENST00000309428 KIRREL1Q96J84 757 aa11.29□□□□□ -0.6
RETREG3-201ENST00000309428 SSX3Q99909 188 aa11.29□□□□□ -0.6
RETREG3-201ENST00000309428 PBDC1Q9BVG4 233 aa11.29□□□□□ -0.6
RETREG3-201ENST00000309428 RBM24Q9BX46 236 aaKnown RBP11.29□□□□□ -0.6
RETREG3-201ENST00000309428 WWTR1Q9GZV5 400 aa11.29□□□□□ -0.6
RETREG3-201ENST00000309428 MED9Q9NWA0 146 aa11.29□□□□□ -0.6
RETREG3-201ENST00000309428 E9PQ18 207 aa11.29□□□□□ -0.6
RETREG3-201ENST00000309428 PHYHO14832 338 aa11.29□□□□□ -0.6
RETREG3-201ENST00000309428 CTDSPLO15194 276 aa11.29□□□□□ -0.6
RETREG3-201ENST00000309428 YIF1AO95070 293 aa11.29□□□□□ -0.6
RETREG3-201ENST00000309428 LYPD3O95274 346 aa11.29□□□□□ -0.6
RETREG3-201ENST00000309428 OR2C1O95371 312 aa11.29□□□□□ -0.6
RETREG3-201ENST00000309428 SLC34A2O95436 690 aa11.29□□□□□ -0.6
RETREG3-201ENST00000309428 ACTL6AO96019 429 aa11.29□□□□□ -0.6
RETREG3-201ENST00000309428 MUC1P15941 1255 aaPredicted RBP11.29□□□□□ -0.6
RETREG3-201ENST00000309428 KLK2P20151 261 aa11.29□□□□□ -0.6
RETREG3-201ENST00000309428 ZNF41P51814 821 aaPredicted RBP11.29□□□□□ -0.6
RETREG3-201ENST00000309428 S100A12P80511 92 aa11.29□□□□□ -0.6
RETREG3-201ENST00000309428 PPA1Q15181 289 aa11.29□□□□□ -0.6
RETREG3-201ENST00000309428 MIDNQ504T8 468 aa11.29□□□□□ -0.6
RETREG3-201ENST00000309428 OR52N4Q8NGI2 321 aa11.29□□□□□ -0.6
RETREG3-201ENST00000309428 OR5L1Q8NGL2 311 aa11.29□□□□□ -0.6
RETREG3-201ENST00000309428 ZNF442Q9H7R0 627 aa11.29□□□□□ -0.6
RETREG3-201ENST00000309428 VSIG4Q9Y279 399 aa11.29□□□□□ -0.6
RETREG3-201ENST00000309428 UBE2J1Q9Y385 318 aaPredicted RBP11.29□□□□□ -0.6
RETREG3-201ENST00000309428 AKAP6Q13023 2319 aa11.29□□□□□ -0.6
RETREG3-201ENST00000309428 OR2M5A3KFT3 312 aa11.28□□□□□ -0.6
RETREG3-201ENST00000309428 ITGB2P05107 769 aa11.28□□□□□ -0.6
RETREG3-201ENST00000309428 RPL12P30050 165 aaKnown RBP11.28□□□□□ -0.6
RETREG3-201ENST00000309428 RPS11P62280 158 aaKnown RBP eCLIP11.28□□□□□ -0.6
RETREG3-201ENST00000309428 FOXF1Q12946 379 aa11.28□□□□□ -0.6
RETREG3-201ENST00000309428 OR10G3Q8NGC4 313 aa11.28□□□□□ -0.6
RETREG3-201ENST00000309428 OR10D4PQ8NGN7 298 aa11.28□□□□□ -0.6
RETREG3-201ENST00000309428 REG4Q9BYZ8 158 aa11.28□□□□□ -0.6
RETREG3-201ENST00000309428 SLC19A3Q9BZV2 496 aa11.28□□□□□ -0.6
RETREG3-201ENST00000309428 LRP12Q9Y561 859 aa11.28□□□□□ -0.6
RETREG3-201ENST00000309428 MTCH2Q9Y6C9 303 aa11.28□□□□□ -0.6
RETREG3-201ENST00000309428 IGHV1OR21-1A0A087WYE8 117 aa11.28□□□□□ -0.6
RETREG3-201ENST00000309428 A0A0U1RQK1 487 aa11.28□□□□□ -0.6
RETREG3-201ENST00000309428 ADAM10O14672 748 aa11.28□□□□□ -0.6
RETREG3-201ENST00000309428 PDGFBP01127 241 aaPredicted RBP11.28□□□□□ -0.6
RETREG3-201ENST00000309428 PPICP45877 212 aa11.28□□□□□ -0.6
RETREG3-201ENST00000309428 IDH3GP51553 393 aaPredicted RBP11.28□□□□□ -0.6
RETREG3-201ENST00000309428 RPS4XP62701 263 aaKnown RBP11.28□□□□□ -0.6
RETREG3-201ENST00000309428 FBXW12Q6X9E4 464 aa11.28□□□□□ -0.6
RETREG3-201ENST00000309428 TMEM123Q8N131 208 aa11.28□□□□□ -0.6
RETREG3-201ENST00000309428 OR9K2Q8NGE7 335 aa11.28□□□□□ -0.6
RETREG3-201ENST00000309428 REEP6Q96HR9 211 aa11.28□□□□□ -0.6
RETREG3-201ENST00000309428 MAGT1Q9H0U3 335 aa11.28□□□□□ -0.6
RETREG3-201ENST00000309428 LUZP4Q9P127 313 aa11.28□□□□□ -0.6
RETREG3-201ENST00000309428 OR2A4O95047 310 aa11.28□□□□□ -0.6
RETREG3-201ENST00000309428 PATE4P0C8F1 98 aa11.28□□□□□ -0.6
RETREG3-201ENST00000309428 OTX2P32243 289 aa11.28□□□□□ -0.6
RETREG3-201ENST00000309428 AFF3P51826 1226 aaKnown RBP11.28□□□□□ -0.6
RETREG3-201ENST00000309428 TAS2R31P59538 309 aa11.28□□□□□ -0.6
RETREG3-201ENST00000309428 SKP2Q13309 424 aa11.28□□□□□ -0.6
RETREG3-201ENST00000309428 HIST2H3PS2Q5TEC6 136 aa11.28□□□□□ -0.6
RETREG3-201ENST00000309428 VASH2Q86V25 355 aa11.28□□□□□ -0.6
RETREG3-201ENST00000309428 ZNF440Q8IYI8 595 aa11.28□□□□□ -0.6
RETREG3-201ENST00000309428 TDHQ8IZJ6 230 aa11.28□□□□□ -0.6
RETREG3-201ENST00000309428 SLC30A7Q8NEW0 376 aa11.28□□□□□ -0.6
RETREG3-201ENST00000309428 HPSE2Q8WWQ2 592 aa11.28□□□□□ -0.6
RETREG3-201ENST00000309428 SLC46A1Q96NT5 459 aa11.28□□□□□ -0.6
RETREG3-201ENST00000309428 GNRHR2Q96P88 292 aa11.28□□□□□ -0.6
RETREG3-201ENST00000309428 OR2A7Q96R45 310 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms