RNA–Protein interactions for RNA: ENST00000307662.4

SYNPO-201, Transcript of synaptopodin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNPO, Length 5,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-201ENST00000307662 AP4M1O00189 453 aa15.63■□□□□ 0.09
SYNPO-201ENST00000307662 CTAG2O75638 210 aa15.63■□□□□ 0.09
SYNPO-201ENST00000307662 TMEM11P17152 192 aa15.63■□□□□ 0.09
SYNPO-201ENST00000307662 SLC25A1P53007 311 aa15.63■□□□□ 0.09
SYNPO-201ENST00000307662 STPG2Q8N412 459 aa15.63■□□□□ 0.09
SYNPO-201ENST00000307662 TMEM37Q8WXS4 190 aa15.63■□□□□ 0.09
SYNPO-201ENST00000307662 SDHBP21912 280 aa15.63■□□□□ 0.09
SYNPO-201ENST00000307662 CD96P40200 585 aa15.63■□□□□ 0.09
SYNPO-201ENST00000307662 ADPRHP54922 357 aa15.63■□□□□ 0.09
SYNPO-201ENST00000307662 OR2A2Q6IF42 318 aa15.63■□□□□ 0.09
SYNPO-201ENST00000307662 ZNF596Q8TC21 504 aa15.63■□□□□ 0.09
SYNPO-201ENST00000307662 ERGIC1Q969X5 290 aa15.63■□□□□ 0.09
SYNPO-201ENST00000307662 ABHD1Q96SE0 405 aa15.63■□□□□ 0.09
SYNPO-201ENST00000307662 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.62■□□□□ 0.09
SYNPO-201ENST00000307662 POM121BA6NF01 834 aa15.62■□□□□ 0.09
SYNPO-201ENST00000307662 CER1O95813 267 aa15.62■□□□□ 0.09
SYNPO-201ENST00000307662 OR2A1Q8NGT9 310 aa15.62■□□□□ 0.09
SYNPO-201ENST00000307662 H1FXQ92522 213 aaKnown RBP15.62■□□□□ 0.09
SYNPO-201ENST00000307662 A0A087WUJ7 227 aa15.62■□□□□ 0.09
SYNPO-201ENST00000307662 PEX11BO96011 259 aa15.62■□□□□ 0.09
SYNPO-201ENST00000307662 C1QAP02745 245 aa15.62■□□□□ 0.09
SYNPO-201ENST00000307662 HIST1H3AP68431 136 aa15.62■□□□□ 0.09
SYNPO-201ENST00000307662 GINS3Q9BRX5 216 aa15.62■□□□□ 0.09
SYNPO-201ENST00000307662 ZNF355PQ9NSJ1 428 aa15.62■□□□□ 0.09
SYNPO-201ENST00000307662 GLI3P10071 1580 aa15.62■□□□□ 0.09
SYNPO-201ENST00000307662 LINC01553A4QN01 128 aa15.62■□□□□ 0.09
SYNPO-201ENST00000307662 THBS4P35443 961 aa15.62■□□□□ 0.09
SYNPO-201ENST00000307662 CSN1S1P47710 185 aa15.62■□□□□ 0.09
SYNPO-201ENST00000307662 ZNF426Q9BUY5 554 aa15.62■□□□□ 0.09
SYNPO-201ENST00000307662 C12orf49Q9H741 205 aa15.62■□□□□ 0.09
SYNPO-201ENST00000307662 POMT1Q9Y6A1 747 aa15.62■□□□□ 0.09
SYNPO-201ENST00000307662 FIGNL2A6NMB9 653 aa15.62■□□□□ 0.09
SYNPO-201ENST00000307662 H0YIG0 161 aa15.62■□□□□ 0.09
SYNPO-201ENST00000307662 ZNF250P15622 560 aa15.62■□□□□ 0.09
SYNPO-201ENST00000307662 ZNF17P17021 662 aa15.62■□□□□ 0.09
SYNPO-201ENST00000307662 GALR1P47211 349 aa15.62■□□□□ 0.09
SYNPO-201ENST00000307662 OR1D5P58170 312 aa15.62■□□□□ 0.09
SYNPO-201ENST00000307662 MORN4Q8NDC4 146 aa15.62■□□□□ 0.09
SYNPO-201ENST00000307662 USB1Q9BQ65 265 aaKnown RBP15.62■□□□□ 0.09
SYNPO-201ENST00000307662 NHSQ6T4R5 1651 aa15.61■□□□□ 0.09
SYNPO-201ENST00000307662 A0A0B4J2E0 115 aa15.61■□□□□ 0.09
SYNPO-201ENST00000307662 A0A1B0GX12 115 aa15.61■□□□□ 0.09
SYNPO-201ENST00000307662 XKRY2A2RUG3 117 aa15.61■□□□□ 0.09
SYNPO-201ENST00000307662 C19orf57Q0VDD7 668 aa15.61■□□□□ 0.09
SYNPO-201ENST00000307662 RAB32Q13637 225 aa15.61■□□□□ 0.09
SYNPO-201ENST00000307662 PRSS54Q6PEW0 395 aa15.61■□□□□ 0.09
SYNPO-201ENST00000307662 ZNRF4Q8WWF5 429 aa15.61■□□□□ 0.09
SYNPO-201ENST00000307662 NXF2Q9GZY0 626 aaKnown RBP15.61■□□□□ 0.09
SYNPO-201ENST00000307662 UBE2L5PA0A1B0GUS4 154 aa15.61■□□□□ 0.09
SYNPO-201ENST00000307662 H3BP45 60 aa15.61■□□□□ 0.09
SYNPO-201ENST00000307662 ABCD4O14678 606 aa15.61■□□□□ 0.09
SYNPO-201ENST00000307662 HSBP1O75506 76 aa15.61■□□□□ 0.09
SYNPO-201ENST00000307662 ZFPL1O95159 310 aa15.61■□□□□ 0.09
SYNPO-201ENST00000307662 WNT11O96014 354 aa15.61■□□□□ 0.09
SYNPO-201ENST00000307662 FXNQ16595 210 aa15.61■□□□□ 0.09
SYNPO-201ENST00000307662 WDR38Q5JTN6 314 aa15.61■□□□□ 0.09
SYNPO-201ENST00000307662 B3GNTL1Q67FW5 361 aaPredicted RBP15.61■□□□□ 0.09
SYNPO-201ENST00000307662 FAM210BQ96KR6 192 aa15.61■□□□□ 0.09
SYNPO-201ENST00000307662 TAAR6Q96RI8 345 aa15.61■□□□□ 0.09
SYNPO-201ENST00000307662 FBXO34Q9NWN3 711 aa15.61■□□□□ 0.09
SYNPO-201ENST00000307662 FRG2CA6NGY1 282 aa15.61■□□□□ 0.09
SYNPO-201ENST00000307662 ARPC3O15145 178 aa15.61■□□□□ 0.09
SYNPO-201ENST00000307662 GSTZ1O43708 216 aaPredicted RBP15.61■□□□□ 0.09
SYNPO-201ENST00000307662 SMUG1Q53HV7 270 aa15.61■□□□□ 0.09
SYNPO-201ENST00000307662 ANKRD33Q7Z3H0 272 aa15.61■□□□□ 0.09
SYNPO-201ENST00000307662 NMES1Q9C002 83 aa15.61■□□□□ 0.09
SYNPO-201ENST00000307662 UQCC1Q9NVA1 299 aa15.61■□□□□ 0.09
SYNPO-201ENST00000307662 USP54Q70EL1 1684 aa15.61■□□□□ 0.09
SYNPO-201ENST00000307662 KCNE1BA0A087WTH5 132 aa15.61■□□□□ 0.09
SYNPO-201ENST00000307662 SERTM2A0A1B0GWG4 89 aa15.61■□□□□ 0.09
SYNPO-201ENST00000307662 hCG_1809904A0A1W2PP81 198 aa15.61■□□□□ 0.09
SYNPO-201ENST00000307662 A0A1W2PPE2 198 aa15.61■□□□□ 0.09
SYNPO-201ENST00000307662 A0A1W2PR64 198 aa15.61■□□□□ 0.09
SYNPO-201ENST00000307662 A0A1W2PRV1 198 aa15.61■□□□□ 0.09
SYNPO-201ENST00000307662 TBX19O60806 448 aa15.61■□□□□ 0.09
SYNPO-201ENST00000307662 ADH4P08319 380 aa15.61■□□□□ 0.09
SYNPO-201ENST00000307662 SMIM6P0DI80 62 aa15.61■□□□□ 0.09
SYNPO-201ENST00000307662 FZD2Q14332 565 aa15.61■□□□□ 0.09
SYNPO-201ENST00000307662 CCDC74AQ96AQ1 378 aa15.61■□□□□ 0.09
SYNPO-201ENST00000307662 TNRC6CQ9HCJ0 1690 aaKnown RBP15.61■□□□□ 0.09
SYNPO-201ENST00000307662 SERTM1A2A2V5 107 aa15.6■□□□□ 0.09
SYNPO-201ENST00000307662 TMEM218A2RU14 115 aa15.6■□□□□ 0.09
SYNPO-201ENST00000307662 ABCD3P28288 659 aa15.6■□□□□ 0.09
SYNPO-201ENST00000307662 CYB561P49447 251 aa15.6■□□□□ 0.09
SYNPO-201ENST00000307662 PNLIPRP2P54317 469 aa15.6■□□□□ 0.09
SYNPO-201ENST00000307662 UBE3DQ7Z6J8 389 aa15.6■□□□□ 0.09
SYNPO-201ENST00000307662 NT5CQ8TCD5 201 aa15.6■□□□□ 0.09
SYNPO-201ENST00000307662 TMED3Q9Y3Q3 217 aa15.6■□□□□ 0.09
SYNPO-201ENST00000307662 CTDSPLO15194 276 aa15.6■□□□□ 0.09
SYNPO-201ENST00000307662 PTTG1IPP53801 180 aa15.6■□□□□ 0.09
SYNPO-201ENST00000307662 BPIFB3P59826 476 aa15.6■□□□□ 0.09
SYNPO-201ENST00000307662 SLC25A26Q70HW3 274 aa15.6■□□□□ 0.09
SYNPO-201ENST00000307662 PMCHP20382 165 aa15.6■□□□□ 0.09
SYNPO-201ENST00000307662 LPAL2Q16609 132 aa15.6■□□□□ 0.09
SYNPO-201ENST00000307662 TMEM183BQ1AE95 376 aa15.6■□□□□ 0.09
SYNPO-201ENST00000307662 MRGPRX4Q96LA9 322 aa15.6■□□□□ 0.09
SYNPO-201ENST00000307662 ANKRD10Q9NXR5 420 aa15.6■□□□□ 0.09
SYNPO-201ENST00000307662 SH3BGRL2Q9UJC5 107 aa15.6■□□□□ 0.09
SYNPO-201ENST00000307662 DUS4LO95620 317 aaKnown RBP15.6■□□□□ 0.09
SYNPO-201ENST00000307662 OR5G3P0C626 314 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms