RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 THSD4Q6ZMP0 1018 aa11.55□□□□□ -0.56
COL3A1-201ENST00000304636 BHLHE23Q8NDY6 225 aa11.55□□□□□ -0.56
COL3A1-201ENST00000304636 GPR119Q8TDV5 335 aa11.55□□□□□ -0.56
COL3A1-201ENST00000304636 ELSPBP1Q96BH3 223 aa11.55□□□□□ -0.56
COL3A1-201ENST00000304636 SOX7Q9BT81 388 aa11.55□□□□□ -0.56
COL3A1-201ENST00000304636 POLDIP2Q9Y2S7 368 aa11.55□□□□□ -0.56
COL3A1-201ENST00000304636 COL16A1Q07092 1604 aaPredicted RBP11.55□□□□□ -0.56
COL3A1-201ENST00000304636 WDR1O75083 606 aa11.55□□□□□ -0.56
COL3A1-201ENST00000304636 RAB32Q13637 225 aa11.55□□□□□ -0.56
COL3A1-201ENST00000304636 KCNAB1Q14722 419 aa11.55□□□□□ -0.56
COL3A1-201ENST00000304636 PWWP2BQ6NUJ5 590 aa11.55□□□□□ -0.56
COL3A1-201ENST00000304636 AMER3Q8N944 861 aa11.55□□□□□ -0.56
COL3A1-201ENST00000304636 FAM96BQ9Y3D0 163 aa11.55□□□□□ -0.56
COL3A1-201ENST00000304636 ABOP16442 354 aa11.55□□□□□ -0.56
COL3A1-201ENST00000304636 CAPZBP47756 277 aa11.55□□□□□ -0.56
COL3A1-201ENST00000304636 SUMO1P63165 101 aaKnown RBP11.55□□□□□ -0.56
COL3A1-201ENST00000304636 DCAF12Q5T6F0 453 aa11.55□□□□□ -0.56
COL3A1-201ENST00000304636 COL13A1Q5TAT6 717 aaPredicted RBP11.55□□□□□ -0.56
COL3A1-201ENST00000304636 CST9Q5W186 159 aa11.55□□□□□ -0.56
COL3A1-201ENST00000304636 FAM24BQ8N5W8 94 aa11.55□□□□□ -0.56
COL3A1-201ENST00000304636 C11orf40Q8WZ69 217 aa11.55□□□□□ -0.56
COL3A1-201ENST00000304636 APH1AQ96BI3 265 aa11.55□□□□□ -0.56
COL3A1-201ENST00000304636 TMED3Q9Y3Q3 217 aa11.55□□□□□ -0.56
COL3A1-201ENST00000304636 TCRBV16S1A1N1A0A5B0 115 aa11.55□□□□□ -0.56
COL3A1-201ENST00000304636 IDSB3KWA1 339 aa11.55□□□□□ -0.56
COL3A1-201ENST00000304636 KLF9Q13886 244 aaPredicted RBP11.55□□□□□ -0.56
COL3A1-201ENST00000304636 FXNQ16595 210 aa11.55□□□□□ -0.56
COL3A1-201ENST00000304636 C10orf111Q8N326 155 aa11.55□□□□□ -0.56
COL3A1-201ENST00000304636 UBAC2Q8NBM4 344 aa11.55□□□□□ -0.56
COL3A1-201ENST00000304636 OPN4Q9UHM6 478 aa11.55□□□□□ -0.56
COL3A1-201ENST00000304636 PRRC2BQ5JSZ5 2229 aaKnown RBP11.55□□□□□ -0.56
COL3A1-201ENST00000304636 ZNF320A2RRD8 509 aa11.55□□□□□ -0.56
COL3A1-201ENST00000304636 PRKNO60260 465 aaPredicted RBP11.55□□□□□ -0.56
COL3A1-201ENST00000304636 WISP3O95389 354 aaPredicted RBP11.55□□□□□ -0.56
COL3A1-201ENST00000304636 TIGITQ495A1 244 aa11.55□□□□□ -0.56
COL3A1-201ENST00000304636 DEGS2Q6QHC5 323 aa11.55□□□□□ -0.56
COL3A1-201ENST00000304636 SEZ6L2Q6UXD5 910 aa11.55□□□□□ -0.56
COL3A1-201ENST00000304636 NOXO1Q8NFA2 376 aa11.55□□□□□ -0.56
COL3A1-201ENST00000304636 PINX1Q96BK5 328 aaKnown RBP11.55□□□□□ -0.56
COL3A1-201ENST00000304636 ALG14Q96F25 216 aa11.55□□□□□ -0.56
COL3A1-201ENST00000304636 NTMQ9P121 344 aa11.55□□□□□ -0.56
COL3A1-201ENST00000304636 SSUH2Q9Y2M2 353 aa11.55□□□□□ -0.56
COL3A1-201ENST00000304636 WSB1Q9Y6I7 421 aa11.55□□□□□ -0.56
COL3A1-201ENST00000304636 EFSO43281 561 aa11.54□□□□□ -0.56
COL3A1-201ENST00000304636 CER1O95813 267 aa11.54□□□□□ -0.56
COL3A1-201ENST00000304636 ZNF574Q6ZN55 896 aaPredicted RBP11.54□□□□□ -0.56
COL3A1-201ENST00000304636 ZNF573Q86YE8 665 aa11.54□□□□□ -0.56
COL3A1-201ENST00000304636 OR5M9Q8NGP3 310 aa11.54□□□□□ -0.56
COL3A1-201ENST00000304636 MUCL1Q96DR8 90 aa11.54□□□□□ -0.56
COL3A1-201ENST00000304636 CLDN34H7C241 214 aa11.54□□□□□ -0.56
COL3A1-201ENST00000304636 SH2D1BO14796 132 aa11.54□□□□□ -0.56
COL3A1-201ENST00000304636 HPXP02790 462 aa11.54□□□□□ -0.56
COL3A1-201ENST00000304636 OR6S1Q8NH40 331 aa11.54□□□□□ -0.56
COL3A1-201ENST00000304636 FAM103A1Q9BTL3 118 aaKnown RBP11.54□□□□□ -0.56
COL3A1-201ENST00000304636 SEC11CQ9BY50 192 aa11.54□□□□□ -0.56
COL3A1-201ENST00000304636 MRPS18AQ9NVS2 196 aaKnown RBP11.54□□□□□ -0.56
COL3A1-201ENST00000304636 HIF1ANQ9NWT6 349 aa11.54□□□□□ -0.56
COL3A1-201ENST00000304636 ABCA3Q99758 1704 aa11.54□□□□□ -0.56
COL3A1-201ENST00000304636 ANKUB1A6NFN9 424 aa11.54□□□□□ -0.56
COL3A1-201ENST00000304636 TRAF3IP2O43734 574 aaPredicted RBP11.54□□□□□ -0.56
COL3A1-201ENST00000304636 GRPP07492 148 aa11.54□□□□□ -0.56
COL3A1-201ENST00000304636 SELEP16581 610 aa11.54□□□□□ -0.56
COL3A1-201ENST00000304636 VEGFBP49765 207 aa11.54□□□□□ -0.56
COL3A1-201ENST00000304636 TPPP2P59282 170 aa11.54□□□□□ -0.56
COL3A1-201ENST00000304636 IQCJQ1A5X6 159 aa11.54□□□□□ -0.56
COL3A1-201ENST00000304636 FAM162BQ5T6X4 162 aa11.54□□□□□ -0.56
COL3A1-201ENST00000304636 RPS19BP1Q86WX3 136 aaKnown RBP11.54□□□□□ -0.56
COL3A1-201ENST00000304636 CMTM2Q8TAZ6 248 aa11.54□□□□□ -0.56
COL3A1-201ENST00000304636 TECTBQ96PL2 329 aa11.54□□□□□ -0.56
COL3A1-201ENST00000304636 C6orf106Q9H6K1 298 aaPredicted RBP11.54□□□□□ -0.56
COL3A1-201ENST00000304636 C7orf66A4D0T2 115 aa11.54□□□□□ -0.56
COL3A1-201ENST00000304636 ANGPTL7O43827 346 aa11.54□□□□□ -0.56
COL3A1-201ENST00000304636 OR10J4P0C629 311 aa11.54□□□□□ -0.56
COL3A1-201ENST00000304636 TAS2R45P59539 299 aa11.54□□□□□ -0.56
COL3A1-201ENST00000304636 KLHDC1Q8N7A1 406 aa11.54□□□□□ -0.56
COL3A1-201ENST00000304636 AKR7LQ8NHP1 331 aa11.54□□□□□ -0.56
COL3A1-201ENST00000304636 ZDHHC11Q9H8X9 412 aa11.54□□□□□ -0.56
COL3A1-201ENST00000304636 LINC01553A4QN01 128 aa11.53□□□□□ -0.56
COL3A1-201ENST00000304636 AP4M1O00189 453 aa11.53□□□□□ -0.56
COL3A1-201ENST00000304636 SMIM6P0DI80 62 aa11.53□□□□□ -0.56
COL3A1-201ENST00000304636 FUT6P51993 359 aa11.53□□□□□ -0.56
COL3A1-201ENST00000304636 EDDM3BP56851 147 aa11.53□□□□□ -0.56
COL3A1-201ENST00000304636 UBE2G1P62253 170 aa11.53□□□□□ -0.56
COL3A1-201ENST00000304636 RDH5Q92781 318 aa11.53□□□□□ -0.56
COL3A1-201ENST00000304636 NMES1Q9C002 83 aa11.53□□□□□ -0.56
COL3A1-201ENST00000304636 UCK1Q9HA47 277 aa11.53□□□□□ -0.56
COL3A1-201ENST00000304636 HDGFL3Q9Y3E1 203 aa11.53□□□□□ -0.56
COL3A1-201ENST00000304636 H0Y8G0 127 aa11.53□□□□□ -0.56
COL3A1-201ENST00000304636 CYB561P49447 251 aa11.53□□□□□ -0.56
COL3A1-201ENST00000304636 FABP6P51161 128 aa11.53□□□□□ -0.56
COL3A1-201ENST00000304636 PPP2CBP62714 309 aa11.53□□□□□ -0.56
COL3A1-201ENST00000304636 PPP2CAP67775 309 aa11.53□□□□□ -0.56
COL3A1-201ENST00000304636 OR4D11Q8NGI4 311 aa11.53□□□□□ -0.56
COL3A1-201ENST00000304636 CMBLQ96DG6 245 aa11.53□□□□□ -0.56
COL3A1-201ENST00000304636 ARHGAP5-AS1Q96IT6 56 aa11.53□□□□□ -0.56
COL3A1-201ENST00000304636 GLRA1P23415 457 aa11.53□□□□□ -0.56
COL3A1-201ENST00000304636 CDKN2AP42771 156 aaKnown RBP11.53□□□□□ -0.56
COL3A1-201ENST00000304636 LYPD8Q6UX82 237 aa11.53□□□□□ -0.56
COL3A1-201ENST00000304636 ZMAT5Q9UDW3 170 aaKnown RBP11.53□□□□□ -0.56
COL3A1-201ENST00000304636 MMP24Q9Y5R2 645 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms