RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 FAM219AQ8IW50 185 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 CCDC28AQ8IWP9 274 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 CGB1A6NKQ9 187 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 LRP3O75074 770 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 ZDHHC11BP0C7U3 371 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 ELK1P19419 428 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 TAGLN2P37802 199 aaKnown RBP6.98□□□□□ -1.29
SCN9A-201ENST00000303354 KLF3P57682 345 aaPredicted RBP6.98□□□□□ -1.29
SCN9A-201ENST00000303354 ECSCRQ19T08 205 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 TMEM88Q6PEY1 159 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 CBLN3Q6UW01 205 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 NRARPQ7Z6K4 114 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 NOXA1Q86UR1 476 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 LRP12Q9Y561 859 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 PRF1P14222 555 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 ORM2P19652 201 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 FGF7P21781 194 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 LIPAP38571 399 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 RBMS2Q15434 407 aaKnown RBP6.98□□□□□ -1.29
SCN9A-201ENST00000303354 C1QL3Q5VWW1 255 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 OR4F5Q8NH21 305 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 OR4F4Q96R69 305 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 DCTN6O00399 190 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 CDK2AP1O14519 115 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 GDF9O60383 454 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 S100A7P31151 101 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 ZNF260Q3ZCT1 412 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 SLC38A9Q8NBW4 561 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 ADAMTS17Q8TE56 1095 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 RPUSD4Q96CM3 377 aaKnown RBP6.98□□□□□ -1.29
SCN9A-201ENST00000303354 ZG16BQ96DA0 208 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 B9D1Q9UPM9 204 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 A0A0A6YYD5 115 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 TCRBV5S1A1TA0A578 114 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 ZBTB25P24278 435 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 RPS19P39019 145 aaKnown RBP6.98□□□□□ -1.29
SCN9A-201ENST00000303354 ZNF133P52736 654 aaPredicted RBP6.98□□□□□ -1.29
SCN9A-201ENST00000303354 IL11RAQ14626 422 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 Q3ZCU0 254 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 ZNF705AQ6ZN79 300 aaPredicted RBP6.98□□□□□ -1.29
SCN9A-201ENST00000303354 SMRP1Q8NCR6 262 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 C4orf45Q96LM5 186 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 UCN2Q96RP3 112 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 ADRA2AP08913 450 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 TLE4Q04727 773 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 GUCA2BQ16661 112 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 LPCAT3Q6P1A2 487 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 OR1F12Q8NHA8 337 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 RHNO1Q9BSD3 238 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 MYH4Q9Y623 1939 aa6.98□□□□□ -1.29
SCN9A-201ENST00000303354 UBE2L5PA0A1B0GUS4 154 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 CYTIPO60759 359 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 ARG1P05089 322 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 SCG5P05408 212 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 DGCR2P98153 550 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 PRB3Q04118 309 aaPredicted RBP6.97□□□□□ -1.29
SCN9A-201ENST00000303354 HIST2H3AQ71DI3 136 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 PERPQ96FX8 193 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 ZFP57Q9NU63 452 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 CNOT2Q9NZN8 540 aaKnown RBP6.97□□□□□ -1.29
SCN9A-201ENST00000303354 ZNF724A8MTY0 619 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 SLC25A4P12235 298 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 PIGPP57054 158 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 OR2A2Q6IF42 318 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 DLEU7Q6UYE1 221 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 SLC36A1Q7Z2H8 476 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 MITD1Q8WV92 249 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 AUNIPQ9H7T9 357 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 ASIC5Q9NY37 505 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 R4GMQ9 66 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 FABP7O15540 132 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 OIP5O43482 229 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 OR4A8P0C604 315 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 PSMB3P49720 205 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 LRRC3BQ96PB8 259 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 TAF9BQ9HBM6 251 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 PRDM7Q9NQW5 492 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 SLC2A8Q9NY64 477 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 F2RL2O00254 374 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 ATF1P18846 271 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 ID4P47928 161 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 LYZP61626 148 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 RAE1P78406 368 aaKnown RBP6.97□□□□□ -1.29
SCN9A-201ENST00000303354 FCN2Q15485 313 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 PRICKLE4Q2TBC4 344 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 PXDC1Q5TGL8 231 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 UBE3DQ7Z6J8 389 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.97□□□□□ -1.29
SCN9A-201ENST00000303354 OR1L4Q8NGR5 311 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 CLDN23Q96B33 292 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 RCL1Q9Y2P8 373 aaKnown RBP6.97□□□□□ -1.29
SCN9A-201ENST00000303354 LIFP15018 202 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 SLC35D3Q5M8T2 416 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 LILRA6Q6PI73 481 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 SEZ6L2Q6UXD5 910 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 SH2D5Q6ZV89 423 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 TPRX1Q8N7U7 411 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 A0A1W2PRX2 142 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 GPRIN2O60269 458 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 HPNP05981 417 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms