RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 TECTBQ96PL2 329 aa13.62□□□□□ -0.23
HERPUD1-201ENST00000300302 SPACA5Q96QH8 159 aa13.62□□□□□ -0.23
HERPUD1-201ENST00000300302 SLX1AQ9BQ83 275 aa13.62□□□□□ -0.23
HERPUD1-201ENST00000300302 KCNK15Q9H427 330 aa13.62□□□□□ -0.23
HERPUD1-201ENST00000300302 OPA3Q9H6K4 179 aa13.62□□□□□ -0.23
HERPUD1-201ENST00000300302 MRPS28Q9Y2Q9 187 aaKnown RBP13.62□□□□□ -0.23
HERPUD1-201ENST00000300302 CACNA1GO43497 2377 aa13.62□□□□□ -0.23
HERPUD1-201ENST00000300302 A0A0A6YYH2 397 aa13.61□□□□□ -0.23
HERPUD1-201ENST00000300302 FUOMA2VDF0 154 aa13.61□□□□□ -0.23
HERPUD1-201ENST00000300302 METTL21EPA6NDL7 271 aa13.61□□□□□ -0.23
HERPUD1-201ENST00000300302 A6NJ64 397 aa13.61□□□□□ -0.23
HERPUD1-201ENST00000300302 GABARAPH6UMI1 98 aa13.61□□□□□ -0.23
HERPUD1-201ENST00000300302 PLA2G10O15496 165 aa13.61□□□□□ -0.23
HERPUD1-201ENST00000300302 UBBP0CG47 229 aa13.61□□□□□ -0.23
HERPUD1-201ENST00000300302 PRKACBP22694 351 aa13.61□□□□□ -0.23
HERPUD1-201ENST00000300302 CCBE1Q6UXH8 406 aaPredicted RBP13.61□□□□□ -0.23
HERPUD1-201ENST00000300302 GFRALQ6UXV0 394 aa13.61□□□□□ -0.23
HERPUD1-201ENST00000300302 NRARPQ7Z6K4 114 aa13.61□□□□□ -0.23
HERPUD1-201ENST00000300302 C17orf78Q8N4C9 275 aa13.61□□□□□ -0.23
HERPUD1-201ENST00000300302 OR5L1Q8NGL2 311 aa13.61□□□□□ -0.23
HERPUD1-201ENST00000300302 SSC4DQ8WTU2 575 aa13.61□□□□□ -0.23
HERPUD1-201ENST00000300302 FCAMRQ8WWV6 532 aa13.61□□□□□ -0.23
HERPUD1-201ENST00000300302 YIPF5Q969M3 257 aa13.61□□□□□ -0.23
HERPUD1-201ENST00000300302 ZNF75AQ96N20 296 aa13.61□□□□□ -0.23
HERPUD1-201ENST00000300302 SFXN3Q9BWM7 321 aa13.61□□□□□ -0.23
HERPUD1-201ENST00000300302 C11orf54Q9H0W9 315 aaPredicted RBP13.61□□□□□ -0.23
HERPUD1-201ENST00000300302 OPN3Q9H1Y3 402 aaPredicted RBP13.61□□□□□ -0.23
HERPUD1-201ENST00000300302 FBLN5Q9UBX5 448 aa13.61□□□□□ -0.23
HERPUD1-201ENST00000300302 ZNF816-ZNF321PA0A0X1KG74 233 aa13.61□□□□□ -0.23
HERPUD1-201ENST00000300302 BCAP31P51572 246 aa13.61□□□□□ -0.23
HERPUD1-201ENST00000300302 DGCR2P98153 550 aa13.61□□□□□ -0.23
HERPUD1-201ENST00000300302 PMPCAQ10713 525 aa13.61□□□□□ -0.23
HERPUD1-201ENST00000300302 TNK1Q13470 666 aa13.61□□□□□ -0.23
HERPUD1-201ENST00000300302 MRPL21Q7Z2W9 205 aaKnown RBP13.61□□□□□ -0.23
HERPUD1-201ENST00000300302 ZNF101Q8IZC7 436 aa13.61□□□□□ -0.23
HERPUD1-201ENST00000300302 TOMM5Q8N4H5 51 aa13.61□□□□□ -0.23
HERPUD1-201ENST00000300302 NPRL2Q8WTW4 380 aa13.61□□□□□ -0.23
HERPUD1-201ENST00000300302 SNRNP40Q96DI7 357 aaKnown RBP13.61□□□□□ -0.23
HERPUD1-201ENST00000300302 MS4A3Q96HJ5 214 aa13.61□□□□□ -0.23
HERPUD1-201ENST00000300302 REPIN1Q9BWE0 567 aaKnown RBP13.61□□□□□ -0.23
HERPUD1-201ENST00000300302 GHRLQ9UBU3 117 aa13.61□□□□□ -0.23
HERPUD1-201ENST00000300302 J3QW42 95 aa13.6□□□□□ -0.23
HERPUD1-201ENST00000300302 LYRM1O43325 122 aa13.6□□□□□ -0.23
HERPUD1-201ENST00000300302 LANCL1O43813 399 aa13.6□□□□□ -0.23
HERPUD1-201ENST00000300302 GMDSO60547 372 aa13.6□□□□□ -0.23
HERPUD1-201ENST00000300302 SCGNO76038 276 aa13.6□□□□□ -0.23
HERPUD1-201ENST00000300302 NRASP01111 189 aa13.6□□□□□ -0.23
HERPUD1-201ENST00000300302 CD3GP09693 182 aa13.6□□□□□ -0.23
HERPUD1-201ENST00000300302 ZNF14P17017 642 aaPredicted RBP13.6□□□□□ -0.23
HERPUD1-201ENST00000300302 CEACAM8P31997 349 aaPredicted RBP13.6□□□□□ -0.23
HERPUD1-201ENST00000300302 RFX2P48378 723 aa13.6□□□□□ -0.23
HERPUD1-201ENST00000300302 GK2Q14410 553 aaPredicted RBP13.6□□□□□ -0.23
HERPUD1-201ENST00000300302 FAM189A2Q15884 450 aa13.6□□□□□ -0.23
HERPUD1-201ENST00000300302 TMEM42Q69YG0 159 aa13.6□□□□□ -0.23
HERPUD1-201ENST00000300302 RAB12Q6IQ22 244 aa13.6□□□□□ -0.23
HERPUD1-201ENST00000300302 GLIPR1L1Q6UWM5 242 aa13.6□□□□□ -0.23
HERPUD1-201ENST00000300302 KRT74Q7RTS7 529 aa13.6□□□□□ -0.23
HERPUD1-201ENST00000300302 OR2W3Q7Z3T1 314 aa13.6□□□□□ -0.23
HERPUD1-201ENST00000300302 CXorf67Q86X51 503 aaPredicted RBP13.6□□□□□ -0.23
HERPUD1-201ENST00000300302 ENKURQ8TC29 256 aa13.6□□□□□ -0.23
HERPUD1-201ENST00000300302 OBP2BQ9NPH6 170 aa13.6□□□□□ -0.23
HERPUD1-201ENST00000300302 GPR173Q9NS66 373 aa13.6□□□□□ -0.23
HERPUD1-201ENST00000300302 KCNN3Q9UGI6 736 aa13.6□□□□□ -0.23
HERPUD1-201ENST00000300302 BSNQ9UPA5 3926 aa13.59□□□□□ -0.23
HERPUD1-201ENST00000300302 CENPXA8MT69 81 aa13.59□□□□□ -0.23
HERPUD1-201ENST00000300302 VSIG8P0DPA2 414 aa13.59□□□□□ -0.23
HERPUD1-201ENST00000300302 SPNP16150 400 aa13.59□□□□□ -0.23
HERPUD1-201ENST00000300302 OR3A4PP47883 348 aa13.59□□□□□ -0.23
HERPUD1-201ENST00000300302 RBPJQ06330 500 aa13.59□□□□□ -0.23
HERPUD1-201ENST00000300302 RNASE12Q5GAN4 147 aaKnown RBP13.59□□□□□ -0.23
HERPUD1-201ENST00000300302 OR10K2Q6IF99 312 aa13.59□□□□□ -0.23
HERPUD1-201ENST00000300302 C3P1Q6ZMU1 363 aa13.59□□□□□ -0.23
HERPUD1-201ENST00000300302 FTMTQ8N4E7 242 aa13.59□□□□□ -0.23
HERPUD1-201ENST00000300302 RPRMLQ8N4K4 120 aa13.59□□□□□ -0.23
HERPUD1-201ENST00000300302 NAXEQ8NCW5 288 aa13.59□□□□□ -0.23
HERPUD1-201ENST00000300302 KCNG3Q8TAE7 436 aa13.59□□□□□ -0.23
HERPUD1-201ENST00000300302 PIGTQ969N2 578 aa13.59□□□□□ -0.23
HERPUD1-201ENST00000300302 S100A13Q99584 98 aa13.59□□□□□ -0.23
HERPUD1-201ENST00000300302 RBFOX1Q9NWB1 397 aaKnown RBP13.59□□□□□ -0.23
HERPUD1-201ENST00000300302 MYEF2Q9P2K5 600 aaKnown RBP13.59□□□□□ -0.23
HERPUD1-201ENST00000300302 EIF3KQ9UBQ5 218 aaKnown RBP13.59□□□□□ -0.23
HERPUD1-201ENST00000300302 RTTNQ86VV8 2226 aa13.59□□□□□ -0.23
HERPUD1-201ENST00000300302 BOD1L1Q8NFC6 3051 aa13.59□□□□□ -0.23
HERPUD1-201ENST00000300302 PTPRQQ9UMZ3 2332 aa13.59□□□□□ -0.23
HERPUD1-201ENST00000300302 TRAV18A0A075B6X5 111 aa13.59□□□□□ -0.23
HERPUD1-201ENST00000300302 GLI4P10075 376 aa13.59□□□□□ -0.23
HERPUD1-201ENST00000300302 CBR1P16152 277 aa13.59□□□□□ -0.23
HERPUD1-201ENST00000300302 PTGFRP43088 359 aa13.59□□□□□ -0.23
HERPUD1-201ENST00000300302 ALDH3B1P43353 468 aa13.59□□□□□ -0.23
HERPUD1-201ENST00000300302 MTCP1P56278 107 aa13.59□□□□□ -0.23
HERPUD1-201ENST00000300302 AP3S2P59780 193 aa13.59□□□□□ -0.23
HERPUD1-201ENST00000300302 QRFPP83859 136 aa13.59□□□□□ -0.23
HERPUD1-201ENST00000300302 TSC22D1Q15714 1073 aa13.59□□□□□ -0.23
HERPUD1-201ENST00000300302 DOLPP1Q86YN1 238 aa13.59□□□□□ -0.23
HERPUD1-201ENST00000300302 FAM46BQ96A09 425 aa13.59□□□□□ -0.23
HERPUD1-201ENST00000300302 PPP1R14BQ96C90 147 aa13.59□□□□□ -0.23
HERPUD1-201ENST00000300302 AUNIPQ9H7T9 357 aa13.59□□□□□ -0.23
HERPUD1-201ENST00000300302 CDH20Q9HBT6 801 aa13.59□□□□□ -0.23
HERPUD1-201ENST00000300302 ASF1BQ9NVP2 202 aa13.59□□□□□ -0.23
HERPUD1-201ENST00000300302 PTTG3PQ9NZH4 202 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms