RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 PPP1R32Q7Z5V6 425 aa8.19□□□□□ -1.1
PRDM9-201ENST00000296682 C9orf62Q8N4C0 152 aa8.19□□□□□ -1.1
PRDM9-201ENST00000296682 RELL2Q8NC24 303 aaPredicted RBP8.19□□□□□ -1.1
PRDM9-201ENST00000296682 DYRK2Q92630 601 aa8.19□□□□□ -1.1
PRDM9-201ENST00000296682 ZNF471Q9BX82 626 aaPredicted RBP8.19□□□□□ -1.1
PRDM9-201ENST00000296682 LUZP4Q9P127 313 aa8.19□□□□□ -1.1
PRDM9-201ENST00000296682 ABI3Q9P2A4 366 aa8.19□□□□□ -1.1
PRDM9-201ENST00000296682 OTOGLQ3ZCN5 2332 aa8.19□□□□□ -1.1
PRDM9-201ENST00000296682 CEP295Q9C0D2 2601 aa8.19□□□□□ -1.1
PRDM9-201ENST00000296682 ZNF850A8MQ14 1090 aa8.19□□□□□ -1.1
PRDM9-201ENST00000296682 E9PLN8 166 aa8.19□□□□□ -1.1
PRDM9-201ENST00000296682 YKT6O15498 198 aa8.19□□□□□ -1.1
PRDM9-201ENST00000296682 ICAM2P13598 275 aa8.19□□□□□ -1.1
PRDM9-201ENST00000296682 NFYAP23511 347 aaPredicted RBP8.19□□□□□ -1.1
PRDM9-201ENST00000296682 ARHGDIBP52566 201 aa8.19□□□□□ -1.1
PRDM9-201ENST00000296682 RRADP55042 308 aa8.19□□□□□ -1.1
PRDM9-201ENST00000296682 MLF1P58340 268 aa8.19□□□□□ -1.1
PRDM9-201ENST00000296682 KISS1Q15726 138 aa8.19□□□□□ -1.1
PRDM9-201ENST00000296682 PCK2Q16822 640 aa8.19□□□□□ -1.1
PRDM9-201ENST00000296682 HDDC2Q7Z4H3 204 aa8.19□□□□□ -1.1
PRDM9-201ENST00000296682 C6orf201Q7Z4U5 140 aa8.19□□□□□ -1.1
PRDM9-201ENST00000296682 GTPBP8Q8N3Z3 284 aaPredicted RBP8.19□□□□□ -1.1
PRDM9-201ENST00000296682 ST8SIA4Q92187 359 aa8.19□□□□□ -1.1
PRDM9-201ENST00000296682 BORCS8Q96FH0 119 aa8.19□□□□□ -1.1
PRDM9-201ENST00000296682 SGCZQ96LD1 299 aa8.19□□□□□ -1.1
PRDM9-201ENST00000296682 HDHD3Q9BSH5 251 aaPredicted RBP8.19□□□□□ -1.1
PRDM9-201ENST00000296682 RYDENQ9NUL5 291 aaKnown RBP8.19□□□□□ -1.1
PRDM9-201ENST00000296682 PARPBPQ9NWS1 579 aa8.19□□□□□ -1.1
PRDM9-201ENST00000296682 EHFQ9NZC4 300 aa8.19□□□□□ -1.1
PRDM9-201ENST00000296682 KLK13Q9UKR3 277 aa8.19□□□□□ -1.1
PRDM9-201ENST00000296682 DIDO1Q9BTC0 2240 aaKnown RBP8.19□□□□□ -1.1
PRDM9-201ENST00000296682 PKDREJQ9NTG1 2253 aa8.19□□□□□ -1.1
PRDM9-201ENST00000296682 MUC6Q6W4X9 2439 aa8.18□□□□□ -1.1
PRDM9-201ENST00000296682 TEX13DA0A0J9YY54 714 aaPredicted RBP8.18□□□□□ -1.1
PRDM9-201ENST00000296682 SPAARA0A1B0GVQ0 90 aa8.18□□□□□ -1.1
PRDM9-201ENST00000296682 PINLYPA6NC86 204 aa8.18□□□□□ -1.1
PRDM9-201ENST00000296682 CYC1P08574 325 aa8.18□□□□□ -1.1
PRDM9-201ENST00000296682 RAC1P63000 192 aa8.18□□□□□ -1.1
PRDM9-201ENST00000296682 SNAI3Q3KNW1 292 aa8.18□□□□□ -1.1
PRDM9-201ENST00000296682 SPATA46Q5T0L3 261 aa8.18□□□□□ -1.1
PRDM9-201ENST00000296682 HES3Q5TGS1 186 aa8.18□□□□□ -1.1
PRDM9-201ENST00000296682 OR2AK2Q8NG84 335 aa8.18□□□□□ -1.1
PRDM9-201ENST00000296682 OR5H2Q8NGV7 314 aa8.18□□□□□ -1.1
PRDM9-201ENST00000296682 SIGLEC12Q96PQ1 595 aa8.18□□□□□ -1.1
PRDM9-201ENST00000296682 ZFP64Q9NPA5 681 aa8.18□□□□□ -1.1
PRDM9-201ENST00000296682 DEPPQ9NTK1 212 aa8.18□□□□□ -1.1
PRDM9-201ENST00000296682 AUP1Q9Y679 476 aa8.18□□□□□ -1.1
PRDM9-201ENST00000296682 BOD1L1Q8NFC6 3051 aa8.18□□□□□ -1.1
PRDM9-201ENST00000296682 KIAA2026Q5HYC2 2103 aa8.18□□□□□ -1.1
PRDM9-201ENST00000296682 LOC400499M0QZD8 3231 aa8.18□□□□□ -1.1
PRDM9-201ENST00000296682 ERVH48-1M5A8F1 160 aa8.18□□□□□ -1.1
PRDM9-201ENST00000296682 NUPL2O15504 423 aaKnown RBP8.18□□□□□ -1.1
PRDM9-201ENST00000296682 OR7C1O76099 320 aaPredicted RBP8.18□□□□□ -1.1
PRDM9-201ENST00000296682 SYNGR4O95473 234 aa8.18□□□□□ -1.1
PRDM9-201ENST00000296682 MT-CO3P00414 261 aa8.18□□□□□ -1.1
PRDM9-201ENST00000296682 IFNA7P01567 189 aa8.18□□□□□ -1.1
PRDM9-201ENST00000296682 Q0VFX4 171 aa8.18□□□□□ -1.1
PRDM9-201ENST00000296682 ZP4Q12836 540 aa8.18□□□□□ -1.1
PRDM9-201ENST00000296682 EXOSC2Q13868 293 aaKnown RBP8.18□□□□□ -1.1
PRDM9-201ENST00000296682 FAM74A1Q5RGS3 127 aa8.18□□□□□ -1.1
PRDM9-201ENST00000296682 ZNF546Q86UE3 836 aa8.18□□□□□ -1.1
PRDM9-201ENST00000296682 GCNT2Q8N0V5 402 aa8.18□□□□□ -1.1
PRDM9-201ENST00000296682 PAPOLGQ9BWT3 736 aaKnown RBP8.18□□□□□ -1.1
PRDM9-201ENST00000296682 CST11Q9H112 138 aa8.18□□□□□ -1.1
PRDM9-201ENST00000296682 OR10A2Q9H208 303 aa8.18□□□□□ -1.1
PRDM9-201ENST00000296682 EMC3Q9P0I2 261 aa8.18□□□□□ -1.1
PRDM9-201ENST00000296682 KCNK7Q9Y2U2 307 aa8.18□□□□□ -1.1
PRDM9-201ENST00000296682 MEIKINA0A087WXM9 373 aa8.18□□□□□ -1.1
PRDM9-201ENST00000296682 CCDC163A0A0D9SF12 145 aa8.18□□□□□ -1.1
PRDM9-201ENST00000296682 GJE1A6NN92 205 aa8.18□□□□□ -1.1
PRDM9-201ENST00000296682 PRAF2O60831 178 aa8.18□□□□□ -1.1
PRDM9-201ENST00000296682 AQP8O94778 261 aa8.18□□□□□ -1.1
PRDM9-201ENST00000296682 OR1C1Q15619 314 aa8.18□□□□□ -1.1
PRDM9-201ENST00000296682 ELFN2Q5R3F8 820 aa8.18□□□□□ -1.1
PRDM9-201ENST00000296682 PLCXD3Q63HM9 321 aa8.18□□□□□ -1.1
PRDM9-201ENST00000296682 SLC23A3Q6PIS1 610 aa8.18□□□□□ -1.1
PRDM9-201ENST00000296682 UNQ6126/PRO20091Q6UXV3 157 aa8.18□□□□□ -1.1
PRDM9-201ENST00000296682 LYPD6Q86Y78 171 aa8.18□□□□□ -1.1
PRDM9-201ENST00000296682 PRR18Q8N4B5 295 aa8.18□□□□□ -1.1
PRDM9-201ENST00000296682 FBXO17Q96EF6 278 aa8.18□□□□□ -1.1
PRDM9-201ENST00000296682 MRPL13Q9BYD1 178 aaKnown RBP8.18□□□□□ -1.1
PRDM9-201ENST00000296682 NELFAQ9H3P2 528 aa8.18□□□□□ -1.1
PRDM9-201ENST00000296682 ZNF442Q9H7R0 627 aa8.18□□□□□ -1.1
PRDM9-201ENST00000296682 WDR54Q9H977 334 aa8.18□□□□□ -1.1
PRDM9-201ENST00000296682 MAB21L2Q9Y586 359 aa8.18□□□□□ -1.1
PRDM9-201ENST00000296682 SRSF10O75494 262 aaKnown RBP8.17□□□□□ -1.1
PRDM9-201ENST00000296682 SULT1A3P0DMM9 295 aa8.17□□□□□ -1.1
PRDM9-201ENST00000296682 SULT1A4P0DMN0 295 aa8.17□□□□□ -1.1
PRDM9-201ENST00000296682 MGMTP16455 207 aa8.17□□□□□ -1.1
PRDM9-201ENST00000296682 CAPZA1P52907 286 aa8.17□□□□□ -1.1
PRDM9-201ENST00000296682 ZFP36L1Q07352 338 aaKnown RBP8.17□□□□□ -1.1
PRDM9-201ENST00000296682 UNC119Q13432 240 aa8.17□□□□□ -1.1
PRDM9-201ENST00000296682 AKIRIN2Q53H80 203 aa8.17□□□□□ -1.1
PRDM9-201ENST00000296682 THOC7Q6I9Y2 204 aaKnown RBP8.17□□□□□ -1.1
PRDM9-201ENST00000296682 ELP2Q6IA86 826 aa8.17□□□□□ -1.1
PRDM9-201ENST00000296682 DEFB124Q8NES8 71 aa8.17□□□□□ -1.1
PRDM9-201ENST00000296682 OR10R2Q8NGX6 335 aa8.17□□□□□ -1.1
PRDM9-201ENST00000296682 KCNG3Q8TAE7 436 aa8.17□□□□□ -1.1
PRDM9-201ENST00000296682 FOXRED1Q96CU9 486 aaPredicted RBP8.17□□□□□ -1.1
PRDM9-201ENST00000296682 FAM86C1Q9NVL1 165 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms