RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 OR51A4Q8NGJ6 313 aa15.82■□□□□ 0.12
CDC42EP3-201ENST00000295324 TERB2Q8NHR7 220 aa15.82■□□□□ 0.12
CDC42EP3-201ENST00000295324 HPSE2Q8WWQ2 592 aa15.82■□□□□ 0.12
CDC42EP3-201ENST00000295324 ST8SIA4Q92187 359 aa15.82■□□□□ 0.12
CDC42EP3-201ENST00000295324 TSPAN32Q96QS1 320 aa15.82■□□□□ 0.12
CDC42EP3-201ENST00000295324 ISG20L2Q9H9L3 353 aaKnown RBP15.82■□□□□ 0.12
CDC42EP3-201ENST00000295324 ARFGEF1Q9Y6D6 1849 aa15.82■□□□□ 0.12
CDC42EP3-201ENST00000295324 GALR2O43603 387 aaPredicted RBP15.82■□□□□ 0.12
CDC42EP3-201ENST00000295324 FGF5P12034 268 aa15.82■□□□□ 0.12
CDC42EP3-201ENST00000295324 EPHA2P29317 976 aa15.82■□□□□ 0.12
CDC42EP3-201ENST00000295324 BEX5Q5H9J7 111 aa15.82■□□□□ 0.12
CDC42EP3-201ENST00000295324 LINC00299Q6ZSB3 139 aa15.82■□□□□ 0.12
CDC42EP3-201ENST00000295324 BHLHA15Q7RTS1 189 aaPredicted RBP15.82■□□□□ 0.12
CDC42EP3-201ENST00000295324 PAQR8Q8TEZ7 354 aa15.82■□□□□ 0.12
CDC42EP3-201ENST00000295324 DOK1Q99704 481 aa15.82■□□□□ 0.12
CDC42EP3-201ENST00000295324 AQP7P3A6NL99 342 aa15.81■□□□□ 0.12
CDC42EP3-201ENST00000295324 NPIPB8E9PQR5 432 aa15.81■□□□□ 0.12
CDC42EP3-201ENST00000295324 CRYBA1P05813 215 aa15.81■□□□□ 0.12
CDC42EP3-201ENST00000295324 CDK5Q00535 292 aa15.81■□□□□ 0.12
CDC42EP3-201ENST00000295324 CD226Q15762 336 aa15.81■□□□□ 0.12
CDC42EP3-201ENST00000295324 FAM219BQ5XKK7 198 aa15.81■□□□□ 0.12
CDC42EP3-201ENST00000295324 OR52I2Q8NH67 350 aa15.81■□□□□ 0.12
CDC42EP3-201ENST00000295324 SAMD10Q9BYL1 202 aa15.81■□□□□ 0.12
CDC42EP3-201ENST00000295324 COL11A1P12107 1806 aaPredicted RBP15.81■□□□□ 0.12
CDC42EP3-201ENST00000295324 FAM221AA4D161 298 aa15.81■□□□□ 0.12
CDC42EP3-201ENST00000295324 TBPP20226 339 aa15.81■□□□□ 0.12
CDC42EP3-201ENST00000295324 FAM212BQ9NTI7 297 aaPredicted RBP15.81■□□□□ 0.12
CDC42EP3-201ENST00000295324 PPP1R3CQ9UQK1 317 aa15.81■□□□□ 0.12
CDC42EP3-201ENST00000295324 YIF1AO95070 293 aa15.81■□□□□ 0.12
CDC42EP3-201ENST00000295324 ANKRD34CP0C6C1 535 aa15.81■□□□□ 0.12
CDC42EP3-201ENST00000295324 FABP5Q01469 135 aa15.81■□□□□ 0.12
CDC42EP3-201ENST00000295324 CST9LP1Q5W188 147 aa15.81■□□□□ 0.12
CDC42EP3-201ENST00000295324 SLC35E1Q96K37 410 aa15.81■□□□□ 0.12
CDC42EP3-201ENST00000295324 COMMD5Q9GZQ3 224 aa15.81■□□□□ 0.12
CDC42EP3-201ENST00000295324 FLVCR1Q9Y5Y0 555 aa15.81■□□□□ 0.12
CDC42EP3-201ENST00000295324 UNC13CQ8NB66 2214 aa15.81■□□□□ 0.12
CDC42EP3-201ENST00000295324 HMGA2P52926 109 aa15.81■□□□□ 0.12
CDC42EP3-201ENST00000295324 SUMF1Q8NBK3 374 aa15.81■□□□□ 0.12
CDC42EP3-201ENST00000295324 LIN7CQ9NUP9 197 aaKnown RBP15.81■□□□□ 0.12
CDC42EP3-201ENST00000295324 DFFBO76075 338 aa15.81■□□□□ 0.12
CDC42EP3-201ENST00000295324 SNRNP70P08621 437 aaKnown RBP15.81■□□□□ 0.12
CDC42EP3-201ENST00000295324 RAB5CP51148 216 aa15.81■□□□□ 0.12
CDC42EP3-201ENST00000295324 RAB1CQ92928 201 aa15.81■□□□□ 0.12
CDC42EP3-201ENST00000295324 GALMQ96C23 342 aa15.81■□□□□ 0.12
CDC42EP3-201ENST00000295324 C20orf85Q9H1P6 137 aa15.81■□□□□ 0.12
CDC42EP3-201ENST00000295324 CROCCQ5TZA2 2017 aa15.8■□□□□ 0.12
CDC42EP3-201ENST00000295324 ZNFX1Q9P2E3 1918 aaKnown RBP15.8■□□□□ 0.12
CDC42EP3-201ENST00000295324 TMEM30CPA0ZSE6 113 aa15.8■□□□□ 0.12
CDC42EP3-201ENST00000295324 CCR6P51684 374 aa15.8■□□□□ 0.12
CDC42EP3-201ENST00000295324 TNFAIP6P98066 277 aaPredicted RBP15.8■□□□□ 0.12
CDC42EP3-201ENST00000295324 TSEN54Q7Z6J9 526 aaKnown RBP15.8■□□□□ 0.12
CDC42EP3-201ENST00000295324 OR10R2Q8NGX6 335 aa15.8■□□□□ 0.12
CDC42EP3-201ENST00000295324 RPH3ALQ9UNE2 315 aa15.8■□□□□ 0.12
CDC42EP3-201ENST00000295324 GP2P55259 537 aaKnown RBP15.8■□□□□ 0.12
CDC42EP3-201ENST00000295324 C11orf54Q9H0W9 315 aaPredicted RBP15.8■□□□□ 0.12
CDC42EP3-201ENST00000295324 NARFLQ9H6Q4 476 aa15.8■□□□□ 0.12
CDC42EP3-201ENST00000295324 NTN4Q9HB63 628 aa15.8■□□□□ 0.12
CDC42EP3-201ENST00000295324 HBE1P02100 147 aa15.8■□□□□ 0.12
CDC42EP3-201ENST00000295324 CLEC3BP05452 202 aa15.8■□□□□ 0.12
CDC42EP3-201ENST00000295324 LIPT2A6NK58 231 aa15.8■□□□□ 0.12
CDC42EP3-201ENST00000295324 DNPH1O43598 174 aa15.8■□□□□ 0.12
CDC42EP3-201ENST00000295324 DHRS3O75911 302 aa15.8■□□□□ 0.12
CDC42EP3-201ENST00000295324 OR5H8P0DN80 308 aa15.8■□□□□ 0.12
CDC42EP3-201ENST00000295324 FUT3P21217 361 aa15.8■□□□□ 0.12
CDC42EP3-201ENST00000295324 SOX18P35713 384 aa15.8■□□□□ 0.12
CDC42EP3-201ENST00000295324 PPP1CBP62140 327 aa15.8■□□□□ 0.12
CDC42EP3-201ENST00000295324 TM4SF19Q96DZ7 209 aa15.8■□□□□ 0.12
CDC42EP3-201ENST00000295324 RNF32Q9H0A6 362 aa15.8■□□□□ 0.12
CDC42EP3-201ENST00000295324 LAMP3Q9UQV4 416 aa15.8■□□□□ 0.12
CDC42EP3-201ENST00000295324 OR6C68A6NDL8 312 aa15.79■□□□□ 0.12
CDC42EP3-201ENST00000295324 SERPINE3A8MV23 424 aa15.79■□□□□ 0.12
CDC42EP3-201ENST00000295324 ST8SIA3O43173 380 aa15.79■□□□□ 0.12
CDC42EP3-201ENST00000295324 CDC14BO60729 498 aa15.79■□□□□ 0.12
CDC42EP3-201ENST00000295324 NKX2-1P43699 371 aaPredicted RBP15.79■□□□□ 0.12
CDC42EP3-201ENST00000295324 CD300LDQ6UXZ3 194 aa15.79■□□□□ 0.12
CDC42EP3-201ENST00000295324 C17orf47Q8NEP4 570 aa15.79■□□□□ 0.12
CDC42EP3-201ENST00000295324 CCL17Q92583 94 aa15.79■□□□□ 0.12
CDC42EP3-201ENST00000295324 ZNF416Q9BWM5 594 aa15.79■□□□□ 0.12
CDC42EP3-201ENST00000295324 SLC39A9Q9NUM3 307 aa15.79■□□□□ 0.12
CDC42EP3-201ENST00000295324 FBXL2Q9UKC9 423 aa15.79■□□□□ 0.12
CDC42EP3-201ENST00000295324 CCL21O00585 134 aa15.79■□□□□ 0.12
CDC42EP3-201ENST00000295324 SPRY1O43609 319 aaPredicted RBP15.79■□□□□ 0.12
CDC42EP3-201ENST00000295324 ZNF85Q03923 595 aa15.79■□□□□ 0.12
CDC42EP3-201ENST00000295324 CSRP2Q16527 193 aa15.79■□□□□ 0.12
CDC42EP3-201ENST00000295324 OR1S2Q8NGQ3 325 aa15.79■□□□□ 0.12
CDC42EP3-201ENST00000295324 NUDCD2Q8WVJ2 157 aa15.79■□□□□ 0.12
CDC42EP3-201ENST00000295324 CORO2AQ92828 525 aa15.79■□□□□ 0.12
CDC42EP3-201ENST00000295324 CDX4O14627 284 aaPredicted RBP15.79■□□□□ 0.12
CDC42EP3-201ENST00000295324 CD1EP15812 388 aa15.79■□□□□ 0.12
CDC42EP3-201ENST00000295324 CA6P23280 308 aa15.79■□□□□ 0.12
CDC42EP3-201ENST00000295324 TLE4Q04727 773 aa15.79■□□□□ 0.12
CDC42EP3-201ENST00000295324 MOGAT1Q96PD6 335 aa15.79■□□□□ 0.12
CDC42EP3-201ENST00000295324 CACFD1Q9UGQ2 172 aa15.79■□□□□ 0.12
CDC42EP3-201ENST00000295324 TRAV1-2A0A0B4J238 106 aa15.79■□□□□ 0.12
CDC42EP3-201ENST00000295324 LIFP15018 202 aa15.79■□□□□ 0.12
CDC42EP3-201ENST00000295324 OR10K2Q6IF99 312 aa15.79■□□□□ 0.12
CDC42EP3-201ENST00000295324 ATG4DQ86TL0 474 aaPredicted RBP15.79■□□□□ 0.12
CDC42EP3-201ENST00000295324 TUSC5Q8IXB3 177 aa15.79■□□□□ 0.12
CDC42EP3-201ENST00000295324 FAM181AQ8N9Y4 354 aa15.79■□□□□ 0.12
CDC42EP3-201ENST00000295324 SLC39A7Q92504 469 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms