RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 PIGCQ92535 297 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 LYZL4Q96KX0 146 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 HDHD3Q9BSH5 251 aaPredicted RBP5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 ARL6Q9H0F7 186 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 SLA2Q9H6Q3 261 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 PNRC2Q9NPJ4 139 aaKnown RBP5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 TMEM9BQ9NQ34 198 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 ZNF581Q9P0T4 197 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 RAB22AQ9UL26 194 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 CSAG2Q9Y5P2 127 aa5.31□□□□□ -1.56
TNFSF4-201ENST00000281834 MEIKINA0A087WXM9 373 aa5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 WIPF3A6NGB9 483 aa5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 M0R233 179 aa5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 ERVH48-1M5A8F1 160 aa5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 HSPB6O14558 160 aa5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 CD63P08962 238 aa5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 OPRM1P35372 400 aa5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 CCL11P51671 97 aa5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 GRB2P62993 217 aaKnown RBP5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 BCL2A1Q16548 175 aa5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 PEAR1Q5VY43 1037 aaPredicted RBP5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 FAM166AQ6J272 317 aa5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 MCEMP1Q8IX19 187 aa5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 RNF138Q8WVD3 245 aa5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 DYRK2Q92630 601 aa5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 SPTSSAQ969W0 71 aa5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 CMTM3Q96MX0 182 aa5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 FOXB1Q99853 325 aa5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 BOKQ9UMX3 212 aaPredicted RBP5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 SHANK1Q9Y566 2161 aa5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 ATMQ13315 3056 aa5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 ANKRD34BA5PLL1 514 aa5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 ETV2O00321 342 aaPredicted RBP5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 ONECUT2O95948 504 aa5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 HPP00738 406 aa5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 CFDP00746 253 aaPredicted RBP5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 KNG1P01042 644 aa5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 CSTBP04080 98 aaKnown RBP5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 ERCC1P07992 297 aaPredicted RBP5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 OR4E1P0C645 316 aa5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 NR2C1P13056 603 aa5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 PGAM2P15259 253 aa5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 FSTP19883 344 aa5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 AMY2BP19961 511 aa5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 S100A1P23297 94 aa5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 ACKR3P25106 362 aa5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 OR3A3P47888 321 aa5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 OR3A2P47893 321 aa5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 ARG2P78540 354 aa5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 HGFACQ04756 655 aa5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 ALKAL2Q6UX46 152 aa5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 DOK3Q7L591 496 aa5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 C6orf201Q7Z4U5 140 aa5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 GGNQ86UU5 652 aa5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 GCNT2Q8N0V5 402 aa5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 TMEM123Q8N131 208 aa5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 OR2M7Q8NG81 312 aa5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 OR10R2Q8NGX6 335 aa5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 OR4K15Q8NH41 348 aa5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 MARCH1Q8TCQ1 289 aa5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 REEP6Q96HR9 211 aa5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 C1QTNF6Q9BXI9 259 aa5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 GON7Q9BXV9 100 aa5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 ABI3Q9P2A4 366 aa5.3□□□□□ -1.56
TNFSF4-201ENST00000281834 A0A0A6YYD4 124 aa5.29□□□□□ -1.56
TNFSF4-201ENST00000281834 C5orf51A6NDU8 294 aa5.29□□□□□ -1.56
TNFSF4-201ENST00000281834 NPIPB13A6NJU9 1138 aa5.29□□□□□ -1.56
TNFSF4-201ENST00000281834 NPIPB4C9JG80 1138 aa5.29□□□□□ -1.56
TNFSF4-201ENST00000281834 RGS13O14921 159 aa5.29□□□□□ -1.56
TNFSF4-201ENST00000281834 NEURL1O76050 574 aa5.29□□□□□ -1.56
TNFSF4-201ENST00000281834 MGMTP16455 207 aa5.29□□□□□ -1.56
TNFSF4-201ENST00000281834 B3GALT5-AS1P59052 145 aa5.29□□□□□ -1.56
TNFSF4-201ENST00000281834 SLC9A3R2Q15599 337 aa5.29□□□□□ -1.56
TNFSF4-201ENST00000281834 TRIP6Q15654 476 aaKnown RBP5.29□□□□□ -1.56
TNFSF4-201ENST00000281834 NDUFA5Q16718 116 aa5.29□□□□□ -1.56
TNFSF4-201ENST00000281834 PLAC9Q5JTB6 97 aa5.29□□□□□ -1.56
TNFSF4-201ENST00000281834 ATPAF1Q5TC12 328 aaPredicted RBP5.29□□□□□ -1.56
TNFSF4-201ENST00000281834 ZNF626Q68DY1 528 aa5.29□□□□□ -1.56
TNFSF4-201ENST00000281834 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.29□□□□□ -1.56
TNFSF4-201ENST00000281834 OR2AK2Q8NG84 335 aa5.29□□□□□ -1.56
TNFSF4-201ENST00000281834 NABP1Q96AH0 204 aa5.29□□□□□ -1.56
TNFSF4-201ENST00000281834 FOXRED1Q96CU9 486 aaPredicted RBP5.29□□□□□ -1.56
TNFSF4-201ENST00000281834 LPAR5Q9H1C0 372 aa5.29□□□□□ -1.56
TNFSF4-201ENST00000281834 OR10A2Q9H208 303 aa5.29□□□□□ -1.56
TNFSF4-201ENST00000281834 COQ3Q9NZJ6 369 aa5.29□□□□□ -1.56
TNFSF4-201ENST00000281834 UPB1Q9UBR1 384 aa5.29□□□□□ -1.56
TNFSF4-201ENST00000281834 ZNF629Q9UEG4 869 aaPredicted RBP5.29□□□□□ -1.56
TNFSF4-201ENST00000281834 EXPH5Q8NEV8 1989 aa5.29□□□□□ -1.56
TNFSF4-201ENST00000281834 SPENQ96T58 3664 aaKnown RBP5.29□□□□□ -1.56
TNFSF4-201ENST00000281834 PKDREJQ9NTG1 2253 aa5.29□□□□□ -1.56
TNFSF4-201ENST00000281834 DISC1C4P0D8 188 aa5.29□□□□□ -1.56
TNFSF4-201ENST00000281834 F5H5P2 479 aa5.29□□□□□ -1.56
TNFSF4-201ENST00000281834 NKX2-8O15522 239 aa5.29□□□□□ -1.56
TNFSF4-201ENST00000281834 CDC14BO60729 498 aa5.29□□□□□ -1.56
TNFSF4-201ENST00000281834 PRAF2O60831 178 aa5.29□□□□□ -1.56
TNFSF4-201ENST00000281834 RAD51DO75771 328 aa5.29□□□□□ -1.56
TNFSF4-201ENST00000281834 SPDEFO95238 335 aa5.29□□□□□ -1.56
TNFSF4-201ENST00000281834 TGM6O95932 706 aa5.29□□□□□ -1.56
TNFSF4-201ENST00000281834 IGHEP01854 428 aa5.29□□□□□ -1.56
TNFSF4-201ENST00000281834 GABRA1P14867 456 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms