RNA–Protein interactions for RNA: ENST00000281187.9

VPS26B-201, Transcript of VPS26, retromer complex component B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26B, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-201ENST00000281187 H0YIG0 161 aa12.69□□□□□ -0.38
VPS26B-201ENST00000281187 FKTNO75072 461 aa12.69□□□□□ -0.38
VPS26B-201ENST00000281187 CCL5P13501 91 aa12.69□□□□□ -0.38
VPS26B-201ENST00000281187 TM4SF4P48230 202 aa12.69□□□□□ -0.38
VPS26B-201ENST00000281187 TAS2R46P59540 309 aa12.69□□□□□ -0.38
VPS26B-201ENST00000281187 ZNF141Q15928 474 aa12.69□□□□□ -0.38
VPS26B-201ENST00000281187 NMES1Q9C002 83 aa12.69□□□□□ -0.38
VPS26B-201ENST00000281187 PBOV1Q9GZY1 135 aa12.69□□□□□ -0.38
VPS26B-201ENST00000281187 RAB18Q9NP72 206 aa12.69□□□□□ -0.38
VPS26B-201ENST00000281187 LOC101059948A0A1B0GTJ6 334 aa12.68□□□□□ -0.38
VPS26B-201ENST00000281187 LINC01553A4QN01 128 aa12.68□□□□□ -0.38
VPS26B-201ENST00000281187 ZNF724A8MTY0 619 aa12.68□□□□□ -0.38
VPS26B-201ENST00000281187 CDRT15L2A8MXV6 281 aa12.68□□□□□ -0.38
VPS26B-201ENST00000281187 SHISA8B8ZZ34 492 aa12.68□□□□□ -0.38
VPS26B-201ENST00000281187 CYTIPO60759 359 aa12.68□□□□□ -0.38
VPS26B-201ENST00000281187 CHRM2P08172 466 aa12.68□□□□□ -0.38
VPS26B-201ENST00000281187 HNRNPA2B1P22626 353 aaKnown RBP12.68□□□□□ -0.38
VPS26B-201ENST00000281187 ZNF117Q03924 483 aa12.68□□□□□ -0.38
VPS26B-201ENST00000281187 ANKRD55Q3KP44 614 aa12.68□□□□□ -0.38
VPS26B-201ENST00000281187 OR2T2Q6IF00 324 aa12.68□□□□□ -0.38
VPS26B-201ENST00000281187 RTN4RL2Q86UN3 420 aa12.68□□□□□ -0.38
VPS26B-201ENST00000281187 ZNF775Q96BV0 537 aaPredicted RBP12.68□□□□□ -0.38
VPS26B-201ENST00000281187 ADAT3Q96EY9 351 aaPredicted RBP12.68□□□□□ -0.38
VPS26B-201ENST00000281187 MAGT1Q9H0U3 335 aa12.68□□□□□ -0.38
VPS26B-201ENST00000281187 A0A1B0GV90 55 aa12.68□□□□□ -0.38
VPS26B-201ENST00000281187 COLCA2A8K830 154 aa12.68□□□□□ -0.38
VPS26B-201ENST00000281187 CDAP32320 146 aa12.68□□□□□ -0.38
VPS26B-201ENST00000281187 IDH3GP51553 393 aaPredicted RBP12.68□□□□□ -0.38
VPS26B-201ENST00000281187 PRSS12P56730 875 aa12.68□□□□□ -0.38
VPS26B-201ENST00000281187 FAM189A2Q15884 450 aa12.68□□□□□ -0.38
VPS26B-201ENST00000281187 SDK2Q58EX2 2172 aa12.68□□□□□ -0.38
VPS26B-201ENST00000281187 STT3BQ8TCJ2 826 aa12.68□□□□□ -0.38
VPS26B-201ENST00000281187 TMEM234Q8WY98 164 aa12.68□□□□□ -0.38
VPS26B-201ENST00000281187 NIPSNAP3BQ9BS92 247 aa12.68□□□□□ -0.38
VPS26B-201ENST00000281187 TXNIPQ9H3M7 391 aa12.68□□□□□ -0.38
VPS26B-201ENST00000281187 UNKLQ9H9P5 680 aaKnown RBP12.68□□□□□ -0.38
VPS26B-201ENST00000281187 C19orf12Q9NSK7 152 aa12.68□□□□□ -0.38
VPS26B-201ENST00000281187 SLC5A6Q9Y289 635 aa12.68□□□□□ -0.38
VPS26B-201ENST00000281187 THEGLP0DJG4 465 aa12.68□□□□□ -0.38
VPS26B-201ENST00000281187 EPHA1P21709 976 aa12.68□□□□□ -0.38
VPS26B-201ENST00000281187 BCKDHBP21953 392 aa12.68□□□□□ -0.38
VPS26B-201ENST00000281187 MECP2P51608 486 aaKnown RBP12.68□□□□□ -0.38
VPS26B-201ENST00000281187 PLAURQ03405 335 aa12.68□□□□□ -0.38
VPS26B-201ENST00000281187 ZNF239Q16600 458 aaKnown RBP12.68□□□□□ -0.38
VPS26B-201ENST00000281187 POM121Q96HA1 1249 aa12.68□□□□□ -0.38
VPS26B-201ENST00000281187 GDE1Q9NZC3 331 aa12.68□□□□□ -0.38
VPS26B-201ENST00000281187 ZFP92A6NM28 416 aa12.67□□□□□ -0.38
VPS26B-201ENST00000281187 PHF1O43189 567 aaPredicted RBP12.67□□□□□ -0.38
VPS26B-201ENST00000281187 MDKP21741 143 aaPredicted RBP12.67□□□□□ -0.38
VPS26B-201ENST00000281187 INSM1Q01101 510 aaPredicted RBP12.67□□□□□ -0.38
VPS26B-201ENST00000281187 ZNF260Q3ZCT1 412 aa12.67□□□□□ -0.38
VPS26B-201ENST00000281187 BRICD5Q6PL45 260 aa12.67□□□□□ -0.38
VPS26B-201ENST00000281187 C16orf47Q6ZP98 133 aaPredicted RBP12.67□□□□□ -0.38
VPS26B-201ENST00000281187 C19orf47Q8N9M1 422 aaKnown RBP12.67□□□□□ -0.38
VPS26B-201ENST00000281187 ADAMTS18Q8TE60 1221 aa12.67□□□□□ -0.38
VPS26B-201ENST00000281187 ASB16Q96NS5 453 aa12.67□□□□□ -0.38
VPS26B-201ENST00000281187 S1PR5Q9H228 398 aa12.67□□□□□ -0.38
VPS26B-201ENST00000281187 PPP4R1LQ9P1A2 415 aa12.67□□□□□ -0.38
VPS26B-201ENST00000281187 MTCL1Q9Y4B5 1905 aaKnown RBP12.67□□□□□ -0.38
VPS26B-201ENST00000281187 IGHV3-20A0A0C4DH32 117 aa12.67□□□□□ -0.38
VPS26B-201ENST00000281187 A8MVM7 634 aa12.67□□□□□ -0.38
VPS26B-201ENST00000281187 G0S2P27469 103 aa12.67□□□□□ -0.38
VPS26B-201ENST00000281187 ARRDC1Q8N5I2 433 aa12.67□□□□□ -0.38
VPS26B-201ENST00000281187 DTWD2Q8NBA8 298 aa12.67□□□□□ -0.38
VPS26B-201ENST00000281187 RNF126Q9BV68 326 aa12.67□□□□□ -0.38
VPS26B-201ENST00000281187 GGACTQ9BVM4 153 aa12.67□□□□□ -0.38
VPS26B-201ENST00000281187 SDHAF3Q9NRP4 125 aa12.67□□□□□ -0.38
VPS26B-201ENST00000281187 YBX2Q9Y2T7 364 aaKnown RBP12.67□□□□□ -0.38
VPS26B-201ENST00000281187 PLXNB3Q9ULL4 1909 aa12.67□□□□□ -0.38
VPS26B-201ENST00000281187 ZNF587BE7ETH6 402 aa12.67□□□□□ -0.38
VPS26B-201ENST00000281187 IFNA10P01566 189 aa12.67□□□□□ -0.38
VPS26B-201ENST00000281187 HIST1H1DP16402 221 aaKnown RBP12.67□□□□□ -0.38
VPS26B-201ENST00000281187 SLC37A1P57057 533 aa12.67□□□□□ -0.38
VPS26B-201ENST00000281187 RAB11AP62491 216 aa12.67□□□□□ -0.38
VPS26B-201ENST00000281187 NAAAQ02083 359 aa12.67□□□□□ -0.38
VPS26B-201ENST00000281187 PTCRAQ6ISU1 281 aaPredicted RBP12.67□□□□□ -0.38
VPS26B-201ENST00000281187 OCSTAMPQ9BR26 566 aa12.67□□□□□ -0.38
VPS26B-201ENST00000281187 ZNF442Q9H7R0 627 aa12.67□□□□□ -0.38
VPS26B-201ENST00000281187 ZNF160Q9HCG1 818 aa12.67□□□□□ -0.38
VPS26B-201ENST00000281187 PADI1Q9ULC6 663 aa12.67□□□□□ -0.38
VPS26B-201ENST00000281187 CXorf65A6NEN9 183 aa12.66□□□□□ -0.38
VPS26B-201ENST00000281187 VSTM2BA6NLU5 285 aa12.66□□□□□ -0.38
VPS26B-201ENST00000281187 LILRB3O75022 631 aa12.66□□□□□ -0.38
VPS26B-201ENST00000281187 ZNF735P0CB33 412 aa12.66□□□□□ -0.38
VPS26B-201ENST00000281187 DAP3P51398 398 aaKnown RBP12.66□□□□□ -0.38
VPS26B-201ENST00000281187 PIGPP57054 158 aa12.66□□□□□ -0.38
VPS26B-201ENST00000281187 RPS4XP62701 263 aaKnown RBP12.66□□□□□ -0.38
VPS26B-201ENST00000281187 CATSPERDQ86XM0 798 aa12.66□□□□□ -0.38
VPS26B-201ENST00000281187 LRRC18Q8N456 261 aa12.66□□□□□ -0.38
VPS26B-201ENST00000281187 ZNF296Q8WUU4 475 aaPredicted RBP12.66□□□□□ -0.38
VPS26B-201ENST00000281187 HPSE2Q8WWQ2 592 aa12.66□□□□□ -0.38
VPS26B-201ENST00000281187 ZDHHC12Q96GR4 267 aa12.66□□□□□ -0.38
VPS26B-201ENST00000281187 SLC35B3Q9H1N7 401 aa12.66□□□□□ -0.38
VPS26B-201ENST00000281187 C5orf66Q9H5L9 145 aa12.66□□□□□ -0.38
VPS26B-201ENST00000281187 KLF15Q9UIH9 416 aa12.66□□□□□ -0.38
VPS26B-201ENST00000281187 BPNT1O95861 308 aa12.66□□□□□ -0.38
VPS26B-201ENST00000281187 POLR2HP52434 150 aaKnown RBP12.66□□□□□ -0.38
VPS26B-201ENST00000281187 RPL23AP62750 156 aaKnown RBP12.66□□□□□ -0.38
VPS26B-201ENST00000281187 MGAT2Q10469 447 aa12.66□□□□□ -0.38
VPS26B-201ENST00000281187 ECH1Q13011 328 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms