RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 SYT14P1Q58G82 188 aa18.32■□□□□ 0.52
CACNA1B-201ENST00000277549 TMEM196Q5HYL7 178 aa18.32■□□□□ 0.52
CACNA1B-201ENST00000277549 DGAT2L7PQ6IED9 249 aa18.32■□□□□ 0.52
CACNA1B-201ENST00000277549 CLDN23Q96B33 292 aa18.32■□□□□ 0.52
CACNA1B-201ENST00000277549 TMPRSS11DO60235 418 aa18.32■□□□□ 0.52
CACNA1B-201ENST00000277549 WNT1P04628 370 aa18.32■□□□□ 0.52
CACNA1B-201ENST00000277549 HYAL1Q12794 435 aa18.32■□□□□ 0.52
CACNA1B-201ENST00000277549 SPEM1Q8N4L4 309 aa18.32■□□□□ 0.52
CACNA1B-201ENST00000277549 NHLRC2Q8NBF2 726 aa18.32■□□□□ 0.52
CACNA1B-201ENST00000277549 FOXB1Q99853 325 aa18.32■□□□□ 0.52
CACNA1B-201ENST00000277549 SLC2A9Q9NRM0 540 aa18.32■□□□□ 0.52
CACNA1B-201ENST00000277549 LIMK1P53667 647 aa18.32■□□□□ 0.52
CACNA1B-201ENST00000277549 MARCH1Q8TCQ1 289 aa18.32■□□□□ 0.52
CACNA1B-201ENST00000277549 LHX4Q969G2 390 aa18.32■□□□□ 0.52
CACNA1B-201ENST00000277549 NOXO1Q8NFA2 376 aa18.32■□□□□ 0.52
CACNA1B-201ENST00000277549 TCRBV3S1A0A5B6 114 aa18.32■□□□□ 0.52
CACNA1B-201ENST00000277549 CASP3P42574 277 aa18.32■□□□□ 0.52
CACNA1B-201ENST00000277549 PCBP4P57723 403 aaKnown RBP18.32■□□□□ 0.52
CACNA1B-201ENST00000277549 Q3ZCU0 254 aa18.32■□□□□ 0.52
CACNA1B-201ENST00000277549 MFSD4AQ8N468 514 aa18.32■□□□□ 0.52
CACNA1B-201ENST00000277549 RNF2Q99496 336 aa18.32■□□□□ 0.52
CACNA1B-201ENST00000277549 PGFP49763 221 aa18.31■□□□□ 0.52
CACNA1B-201ENST00000277549 METAP1P53582 386 aa18.31■□□□□ 0.52
CACNA1B-201ENST00000277549 ECSCRQ19T08 205 aa18.31■□□□□ 0.52
CACNA1B-201ENST00000277549 FNDC7Q5VTL7 733 aa18.31■□□□□ 0.52
CACNA1B-201ENST00000277549 NUP37Q8NFH4 326 aa18.31■□□□□ 0.52
CACNA1B-201ENST00000277549 ARHGDIGQ99819 225 aa18.31■□□□□ 0.52
CACNA1B-201ENST00000277549 RPP25Q9BUL9 199 aaKnown RBP18.31■□□□□ 0.52
CACNA1B-201ENST00000277549 RAB18Q9NP72 206 aa18.31■□□□□ 0.52
CACNA1B-201ENST00000277549 DIMT1Q9UNQ2 313 aaKnown RBP18.31■□□□□ 0.52
CACNA1B-201ENST00000277549 ARFGEF2Q9Y6D5 1785 aa18.31■□□□□ 0.52
CACNA1B-201ENST00000277549 TRAV17A0A0B4J275 112 aa18.31■□□□□ 0.52
CACNA1B-201ENST00000277549 ALG1L2C9J202 215 aa18.31■□□□□ 0.52
CACNA1B-201ENST00000277549 M0R296 226 aa18.31■□□□□ 0.52
CACNA1B-201ENST00000277549 CDK5Q00535 292 aa18.31■□□□□ 0.52
CACNA1B-201ENST00000277549 TBCEQ15813 527 aaPredicted RBP18.31■□□□□ 0.52
CACNA1B-201ENST00000277549 ZNF528Q3MIS6 628 aa18.31■□□□□ 0.52
CACNA1B-201ENST00000277549 TCTE3Q8IZS6 198 aa18.31■□□□□ 0.52
CACNA1B-201ENST00000277549 ZNF596Q8TC21 504 aa18.31■□□□□ 0.52
CACNA1B-201ENST00000277549 FMN2Q9NZ56 1722 aa18.31■□□□□ 0.52
CACNA1B-201ENST00000277549 IGHV3OR15-7A0A075B7D8 119 aa18.31■□□□□ 0.52
CACNA1B-201ENST00000277549 HOXC11O43248 304 aaPredicted RBP18.31■□□□□ 0.52
CACNA1B-201ENST00000277549 FCMRO60667 390 aa18.31■□□□□ 0.52
CACNA1B-201ENST00000277549 CTXN2P0C2S0 81 aa18.31■□□□□ 0.52
CACNA1B-201ENST00000277549 FAM3AP98173 230 aa18.31■□□□□ 0.52
CACNA1B-201ENST00000277549 HMGN3Q15651 99 aa18.31■□□□□ 0.52
CACNA1B-201ENST00000277549 GUCA2BQ16661 112 aa18.31■□□□□ 0.52
CACNA1B-201ENST00000277549 ADGRG7Q96K78 797 aa18.31■□□□□ 0.52
CACNA1B-201ENST00000277549 TXLNGYQ9BZA5 131 aa18.31■□□□□ 0.52
CACNA1B-201ENST00000277549 TNFRSF10CO14798 259 aa18.31■□□□□ 0.52
CACNA1B-201ENST00000277549 CD3EP07766 207 aa18.31■□□□□ 0.52
CACNA1B-201ENST00000277549 SAXO2Q658L1 398 aa18.31■□□□□ 0.52
CACNA1B-201ENST00000277549 CDX2Q99626 313 aaPredicted RBP18.31■□□□□ 0.52
CACNA1B-201ENST00000277549 TMPRSS5Q9H3S3 457 aa18.31■□□□□ 0.52
CACNA1B-201ENST00000277549 ADAMTS5Q9UNA0 930 aa18.31■□□□□ 0.52
CACNA1B-201ENST00000277549 NEURL1O76050 574 aa18.31■□□□□ 0.52
CACNA1B-201ENST00000277549 USF1P22415 310 aaPredicted RBP18.31■□□□□ 0.52
CACNA1B-201ENST00000277549 B3GNTL1Q67FW5 361 aaPredicted RBP18.31■□□□□ 0.52
CACNA1B-201ENST00000277549 SMIM12Q96EX1 92 aa18.31■□□□□ 0.52
CACNA1B-201ENST00000277549 TUBAL3A6NHL2 446 aa18.3■□□□□ 0.52
CACNA1B-201ENST00000277549 DGCR2P98153 550 aa18.3■□□□□ 0.52
CACNA1B-201ENST00000277549 UBTD2Q8WUN7 234 aa18.3■□□□□ 0.52
CACNA1B-201ENST00000277549 PCGF1Q9BSM1 259 aa18.3■□□□□ 0.52
CACNA1B-201ENST00000277549 TARM1B6A8C7 271 aa18.3■□□□□ 0.52
CACNA1B-201ENST00000277549 ADAM20O43506 726 aa18.3■□□□□ 0.52
CACNA1B-201ENST00000277549 PTBP3O95758 552 aaKnown RBP18.3■□□□□ 0.52
CACNA1B-201ENST00000277549 ATP1B1P05026 303 aa18.3■□□□□ 0.52
CACNA1B-201ENST00000277549 PLPP6Q8IY26 295 aa18.3■□□□□ 0.52
CACNA1B-201ENST00000277549 ANKRD53Q8N9V6 530 aa18.3■□□□□ 0.52
CACNA1B-201ENST00000277549 VPS25Q9BRG1 176 aa18.3■□□□□ 0.52
CACNA1B-201ENST00000277549 UCK1Q9HA47 277 aa18.3■□□□□ 0.52
CACNA1B-201ENST00000277549 H0YIG0 161 aa18.3■□□□□ 0.52
CACNA1B-201ENST00000277549 GABRG2P18507 467 aa18.3■□□□□ 0.52
CACNA1B-201ENST00000277549 BSGP35613 385 aa18.3■□□□□ 0.52
CACNA1B-201ENST00000277549 OR5H6Q8NGV6 325 aa18.3■□□□□ 0.52
CACNA1B-201ENST00000277549 ZMAT5Q9UDW3 170 aaKnown RBP18.3■□□□□ 0.52
CACNA1B-201ENST00000277549 CHD4Q14839 1912 aa18.3■□□□□ 0.52
CACNA1B-201ENST00000277549 ZNF354AO60765 605 aaPredicted RBP18.3■□□□□ 0.52
CACNA1B-201ENST00000277549 SUMO1P63165 101 aaKnown RBP18.3■□□□□ 0.52
CACNA1B-201ENST00000277549 OR2A2Q6IF42 318 aa18.3■□□□□ 0.52
CACNA1B-201ENST00000277549 OR52B4Q8NGK2 314 aa18.3■□□□□ 0.52
CACNA1B-201ENST00000277549 PIK3IP1Q96FE7 263 aa18.3■□□□□ 0.52
CACNA1B-201ENST00000277549 S1PR5Q9H228 398 aa18.3■□□□□ 0.52
CACNA1B-201ENST00000277549 ISG20L2Q9H9L3 353 aaKnown RBP18.3■□□□□ 0.52
CACNA1B-201ENST00000277549 FAM53CQ9NYF3 392 aa18.3■□□□□ 0.52
CACNA1B-201ENST00000277549 RFX2P48378 723 aa18.3■□□□□ 0.52
CACNA1B-201ENST00000277549 CCR5P51681 352 aa18.29■□□□□ 0.52
CACNA1B-201ENST00000277549 OR2B8PP59922 312 aa18.29■□□□□ 0.52
CACNA1B-201ENST00000277549 VAMP3Q15836 100 aa18.29■□□□□ 0.52
CACNA1B-201ENST00000277549 ZNF793Q6ZN11 406 aa18.29■□□□□ 0.52
CACNA1B-201ENST00000277549 MRGPRDQ8TDS7 321 aa18.29■□□□□ 0.52
CACNA1B-201ENST00000277549 PNLIPRP2P54317 469 aa18.29■□□□□ 0.52
CACNA1B-201ENST00000277549 SP6Q3SY56 376 aa18.29■□□□□ 0.52
CACNA1B-201ENST00000277549 TTC9Q92623 222 aa18.29■□□□□ 0.52
CACNA1B-201ENST00000277549 RASL11BQ9BPW5 248 aa18.29■□□□□ 0.52
CACNA1B-201ENST00000277549 C19orf53Q9UNZ5 99 aaPredicted RBP18.29■□□□□ 0.52
CACNA1B-201ENST00000277549 H7BYZ3 331 aa18.29■□□□□ 0.52
CACNA1B-201ENST00000277549 CST7O76096 145 aa18.29■□□□□ 0.52
CACNA1B-201ENST00000277549 DIO1P49895 249 aa18.29■□□□□ 0.52
CACNA1B-201ENST00000277549 TMEM108Q6UXF1 575 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms