RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 DCBLD2Q96PD2 775 aa14.18□□□□□ -0.14
MAP1LC3B-201ENST00000268607 TAAR9Q96RI9 348 aa14.18□□□□□ -0.14
MAP1LC3B-201ENST00000268607 DUSP23Q9BVJ7 150 aa14.18□□□□□ -0.14
MAP1LC3B-201ENST00000268607 FN3KRPQ9HA64 309 aa14.18□□□□□ -0.14
MAP1LC3B-201ENST00000268607 TIMM10BQ9Y5J6 103 aa14.18□□□□□ -0.14
MAP1LC3B-201ENST00000268607 GVINP1Q7Z2Y8 2422 aa14.18□□□□□ -0.14
MAP1LC3B-201ENST00000268607 NUDT14O95848 222 aa14.18□□□□□ -0.14
MAP1LC3B-201ENST00000268607 DDAH2O95865 285 aa14.18□□□□□ -0.14
MAP1LC3B-201ENST00000268607 IL2RAP01589 272 aa14.18□□□□□ -0.14
MAP1LC3B-201ENST00000268607 LPAR6P43657 344 aa14.18□□□□□ -0.14
MAP1LC3B-201ENST00000268607 ID4P47928 161 aa14.18□□□□□ -0.14
MAP1LC3B-201ENST00000268607 GSK3AP49840 483 aa14.18□□□□□ -0.14
MAP1LC3B-201ENST00000268607 C1QL3Q5VWW1 255 aa14.18□□□□□ -0.14
MAP1LC3B-201ENST00000268607 ZNF585AQ6P3V2 769 aa14.18□□□□□ -0.14
MAP1LC3B-201ENST00000268607 SLC23A3Q6PIS1 610 aa14.18□□□□□ -0.14
MAP1LC3B-201ENST00000268607 MARCH3Q86UD3 253 aa14.18□□□□□ -0.14
MAP1LC3B-201ENST00000268607 GVQW1Q8N7I0 195 aa14.18□□□□□ -0.14
MAP1LC3B-201ENST00000268607 EXD3Q8N9H8 876 aa14.18□□□□□ -0.14
MAP1LC3B-201ENST00000268607 BHLHE23Q8NDY6 225 aa14.18□□□□□ -0.14
MAP1LC3B-201ENST00000268607 RHBDD1Q8TEB9 315 aa14.18□□□□□ -0.14
MAP1LC3B-201ENST00000268607 ZNF721Q8TF20 911 aa14.18□□□□□ -0.14
MAP1LC3B-201ENST00000268607 KTI12Q96EK9 354 aaPredicted RBP14.18□□□□□ -0.14
MAP1LC3B-201ENST00000268607 C4orf45Q96LM5 186 aa14.18□□□□□ -0.14
MAP1LC3B-201ENST00000268607 CCDC74BQ96LY2 380 aa14.18□□□□□ -0.14
MAP1LC3B-201ENST00000268607 PPP4R1LQ9P1A2 415 aa14.18□□□□□ -0.14
MAP1LC3B-201ENST00000268607 MRPS18BQ9Y676 258 aaKnown RBP14.18□□□□□ -0.14
MAP1LC3B-201ENST00000268607 BLACEA4D250 179 aa14.17□□□□□ -0.14
MAP1LC3B-201ENST00000268607 H0YIZ8 118 aa14.17□□□□□ -0.14
MAP1LC3B-201ENST00000268607 ZNF264O43296 627 aa14.17□□□□□ -0.14
MAP1LC3B-201ENST00000268607 HCRTR2O43614 444 aa14.17□□□□□ -0.14
MAP1LC3B-201ENST00000268607 ALOX5APP20292 161 aa14.17□□□□□ -0.14
MAP1LC3B-201ENST00000268607 HTR2CP28335 458 aa14.17□□□□□ -0.14
MAP1LC3B-201ENST00000268607 CTXN1P60606 82 aa14.17□□□□□ -0.14
MAP1LC3B-201ENST00000268607 EGR4Q05215 589 aa14.17□□□□□ -0.14
MAP1LC3B-201ENST00000268607 RASGEF1BQ0VAM2 473 aa14.17□□□□□ -0.14
MAP1LC3B-201ENST00000268607 RNASE10Q5GAN6 216 aaKnown RBP14.17□□□□□ -0.14
MAP1LC3B-201ENST00000268607 REC114Q7Z4M0 266 aa14.17□□□□□ -0.14
MAP1LC3B-201ENST00000268607 CCDC54Q8NEL0 328 aa14.17□□□□□ -0.14
MAP1LC3B-201ENST00000268607 MISP3Q96FF7 219 aa14.17□□□□□ -0.14
MAP1LC3B-201ENST00000268607 KIRREL1Q96J84 757 aa14.17□□□□□ -0.14
MAP1LC3B-201ENST00000268607 CMKLR1Q99788 373 aa14.17□□□□□ -0.14
MAP1LC3B-201ENST00000268607 SYT4Q9H2B2 425 aa14.17□□□□□ -0.14
MAP1LC3B-201ENST00000268607 PISDQ9UG56 409 aa14.17□□□□□ -0.14
MAP1LC3B-201ENST00000268607 URB1O60287 2271 aaKnown RBP14.17□□□□□ -0.14
MAP1LC3B-201ENST00000268607 ARID1AO14497 2285 aa14.17□□□□□ -0.14
MAP1LC3B-201ENST00000268607 DCDC2BA2VCK2 349 aa14.17□□□□□ -0.14
MAP1LC3B-201ENST00000268607 M0R036 132 aa14.17□□□□□ -0.14
MAP1LC3B-201ENST00000268607 MFNGO00587 321 aa14.17□□□□□ -0.14
MAP1LC3B-201ENST00000268607 IL33O95760 270 aa14.17□□□□□ -0.14
MAP1LC3B-201ENST00000268607 IFNA2P01563 188 aa14.17□□□□□ -0.14
MAP1LC3B-201ENST00000268607 SERPINA5P05154 406 aa14.17□□□□□ -0.14
MAP1LC3B-201ENST00000268607 CFPP27918 469 aa14.17□□□□□ -0.14
MAP1LC3B-201ENST00000268607 S100A2P29034 98 aa14.17□□□□□ -0.14
MAP1LC3B-201ENST00000268607 TACR3P29371 465 aa14.17□□□□□ -0.14
MAP1LC3B-201ENST00000268607 PRPS1P60891 318 aa14.17□□□□□ -0.14
MAP1LC3B-201ENST00000268607 RPS4XP62701 263 aaKnown RBP14.17□□□□□ -0.14
MAP1LC3B-201ENST00000268607 WBP2NLQ6ICG8 309 aa14.17□□□□□ -0.14
MAP1LC3B-201ENST00000268607 DRAM2Q6UX65 266 aa14.17□□□□□ -0.14
MAP1LC3B-201ENST00000268607 C9orf40Q8IXQ3 194 aa14.17□□□□□ -0.14
MAP1LC3B-201ENST00000268607 ACBD4Q8NC06 268 aa14.17□□□□□ -0.14
MAP1LC3B-201ENST00000268607 FOXN4Q96NZ1 517 aa14.17□□□□□ -0.14
MAP1LC3B-201ENST00000268607 PRRT1Q99946 306 aa14.17□□□□□ -0.14
MAP1LC3B-201ENST00000268607 CHST5Q9GZS9 411 aa14.17□□□□□ -0.14
MAP1LC3B-201ENST00000268607 KCNG2Q9UJ96 466 aa14.17□□□□□ -0.14
MAP1LC3B-201ENST00000268607 FAM157AC9JC47 383 aa14.16□□□□□ -0.14
MAP1LC3B-201ENST00000268607 STK17BO94768 372 aa14.16□□□□□ -0.14
MAP1LC3B-201ENST00000268607 IGKV3-11P04433 115 aa14.16□□□□□ -0.14
MAP1LC3B-201ENST00000268607 FCGR3AP08637 254 aa14.16□□□□□ -0.14
MAP1LC3B-201ENST00000268607 HOXB5P09067 269 aa14.16□□□□□ -0.14
MAP1LC3B-201ENST00000268607 CCL4P13236 92 aa14.16□□□□□ -0.14
MAP1LC3B-201ENST00000268607 HOXA5P20719 270 aa14.16□□□□□ -0.14
MAP1LC3B-201ENST00000268607 FBLP22087 321 aaKnown RBP14.16□□□□□ -0.14
MAP1LC3B-201ENST00000268607 GRK6P43250 576 aa14.16□□□□□ -0.14
MAP1LC3B-201ENST00000268607 SPEM2Q0P670 501 aa14.16□□□□□ -0.14
MAP1LC3B-201ENST00000268607 FNDC7Q5VTL7 733 aa14.16□□□□□ -0.14
MAP1LC3B-201ENST00000268607 RNASE11Q8TAA1 199 aaKnown RBP14.16□□□□□ -0.14
MAP1LC3B-201ENST00000268607 THAP3Q8WTV1 239 aaPredicted RBP14.16□□□□□ -0.14
MAP1LC3B-201ENST00000268607 ADIPOR1Q96A54 375 aa14.16□□□□□ -0.14
MAP1LC3B-201ENST00000268607 ZNF501Q96CX3 271 aaPredicted RBP14.16□□□□□ -0.14
MAP1LC3B-201ENST00000268607 SLC46A1Q96NT5 459 aa14.16□□□□□ -0.14
MAP1LC3B-201ENST00000268607 SLCO5A1Q9H2Y9 848 aa14.16□□□□□ -0.14
MAP1LC3B-201ENST00000268607 PRO1933Q9H354 126 aa14.16□□□□□ -0.14
MAP1LC3B-201ENST00000268607 LOC390937A0A1W2PQ73 354 aa14.16□□□□□ -0.14
MAP1LC3B-201ENST00000268607 BTBD17A6NE02 478 aa14.16□□□□□ -0.14
MAP1LC3B-201ENST00000268607 SLC25A1P53007 311 aa14.16□□□□□ -0.14
MAP1LC3B-201ENST00000268607 PNLIPRP3Q17RR3 467 aa14.16□□□□□ -0.14
MAP1LC3B-201ENST00000268607 ISXQ2M1V0 245 aa14.16□□□□□ -0.14
MAP1LC3B-201ENST00000268607 TMEM225Q6GV28 225 aa14.16□□□□□ -0.14
MAP1LC3B-201ENST00000268607 SLC35D2Q76EJ3 337 aa14.16□□□□□ -0.14
MAP1LC3B-201ENST00000268607 ATG4DQ86TL0 474 aaPredicted RBP14.16□□□□□ -0.14
MAP1LC3B-201ENST00000268607 D2HGDHQ8N465 521 aa14.16□□□□□ -0.14
MAP1LC3B-201ENST00000268607 SMIM8Q96KF7 97 aa14.16□□□□□ -0.14
MAP1LC3B-201ENST00000268607 ELOVL3Q9HB03 270 aa14.16□□□□□ -0.14
MAP1LC3B-201ENST00000268607 TAS2R4Q9NYW5 299 aa14.16□□□□□ -0.14
MAP1LC3B-201ENST00000268607 IGKV3D-11A0A0A0MRZ8 115 aa14.15□□□□□ -0.14
MAP1LC3B-201ENST00000268607 H7C1Q1 480 aa14.15□□□□□ -0.14
MAP1LC3B-201ENST00000268607 EIF1AYO14602 144 aaKnown RBP14.15□□□□□ -0.14
MAP1LC3B-201ENST00000268607 EFSO43281 561 aa14.15□□□□□ -0.14
MAP1LC3B-201ENST00000268607 DOK2O60496 412 aa14.15□□□□□ -0.14
MAP1LC3B-201ENST00000268607 MED6O75586 246 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms