RNA–Protein interactions for RNA: ENST00000268049.11

USP3-201, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-201ENST00000268049 ZNF724A8MTY0 619 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 K7ERU9 68 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 ALDOCP09972 364 aaKnown RBP7.04□□□□□ -1.28
USP3-201ENST00000268049 MGMTP16455 207 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 RPL13AP40429 203 aaKnown RBP7.04□□□□□ -1.28
USP3-201ENST00000268049 RBP2P50120 134 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 MFGE8Q08431 387 aaPredicted RBP7.04□□□□□ -1.28
USP3-201ENST00000268049 ANKRD16Q6P6B7 361 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 MOB3BQ86TA1 216 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 CLECL1Q8IZS7 167 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 OR5AS1Q8N127 324 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 OR5D13Q8NGL4 314 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 OR6F1Q8NGZ6 308 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 DTD1Q8TEA8 209 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 RASL11BQ9BPW5 248 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 SF3B6Q9Y3B4 125 aaKnown RBP7.04□□□□□ -1.28
USP3-201ENST00000268049 MGAMO43451 1857 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 KNTC1P50748 2209 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 A0A1B0GTH9 108 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 TMEM200CA6NKL6 621 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 ZFP92A6NM28 416 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 CEBPZOSA8MTT3 80 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 KDM4EB2RXH2 506 aaPredicted RBP7.04□□□□□ -1.28
USP3-201ENST00000268049 TCF21O43680 179 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 YIF1AO95070 293 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 METTL15P1P0C7V9 234 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 FAM157BP0CG42 384 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 TGM1P22735 817 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 OMGP23515 440 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 PSMB3P49720 205 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 KRTDAPP60985 99 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 RGNQ15493 299 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 BRICD5Q6PL45 260 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 FBXW12Q6X9E4 464 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 SERPINA11Q86U17 422 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 LGALS14Q8TCE9 139 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 SFT2D1Q8WV19 159 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 MIB2Q96AX9 1013 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 ARSGQ96EG1 525 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 OR4C12Q96R67 309 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 ALG12Q9BV10 488 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 RIMS4Q9H426 269 aaPredicted RBP7.04□□□□□ -1.28
USP3-201ENST00000268049 ISYNA1Q9NPH2 558 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 BET1LQ9NYM9 111 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 IER3IP1Q9Y5U9 82 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 ATG2BQ96BY7 2078 aa7.04□□□□□ -1.28
USP3-201ENST00000268049 C5orf49A4QMS7 147 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 AP4M1O00189 453 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 TAAR5O14804 337 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 NME2P1O60361 137 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 ANKRD34CP0C6C1 535 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 ABCD3P28288 659 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 HYAL4Q2M3T9 481 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 VMA21Q3ZAQ7 101 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 OR2G2Q8NGZ5 317 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 APOBEC3DQ96AK3 386 aaPredicted RBP7.03□□□□□ -1.28
USP3-201ENST00000268049 OR5M11Q96RB7 305 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 SAP30LQ9HAJ7 183 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 THSD7BQ9C0I4 1608 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 RFPL4AA6NLU0 287 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 SEC14L6B5MCN3 397 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 RFPL4AL1F8VTS6 287 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 H0YIV9 168 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 SLC16A6O15403 523 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 XRCC3O43542 346 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 CRHP06850 196 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 SPP1P10451 314 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 ANXA7P20073 488 aaKnown RBP7.03□□□□□ -1.28
USP3-201ENST00000268049 POLR2IP36954 125 aaKnown RBP7.03□□□□□ -1.28
USP3-201ENST00000268049 PIGAP37287 484 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 RPS26P62854 115 aaKnown RBP7.03□□□□□ -1.28
USP3-201ENST00000268049 TESK1Q15569 626 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 OR1Q1Q15612 314 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 FAM74A1Q5RGS3 127 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 Q6ZRG5 221 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 HMGN2P46Q86SG4 172 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 OR51A2Q8NGJ7 313 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 TM4SF19Q96DZ7 209 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 ZMYND19Q96E35 227 aaPredicted RBP7.03□□□□□ -1.28
USP3-201ENST00000268049 PTDSS2Q9BVG9 487 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 ANKRD19PQ9H560 264 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 MMP25Q9NPA2 562 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 TMEM269A0A1B0GVZ9 245 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 ARNTLO00327 626 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 TMEM127O75204 238 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 PEX11BO96011 259 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 ATP1B1P05026 303 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 OR4A8P0C604 315 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 SPNP16150 400 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 GP2P55259 537 aaKnown RBP7.03□□□□□ -1.28
USP3-201ENST00000268049 MTCP1P56278 107 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 PKIAP61925 76 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 KCNMB1Q16558 191 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 ATPAF1Q5TC12 328 aaPredicted RBP7.03□□□□□ -1.28
USP3-201ENST00000268049 C1QL3Q5VWW1 255 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 TMEM64Q6YI46 380 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 OR56B1Q8NGI3 324 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 SLC25A46Q96AG3 418 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 ARHGDIGQ99819 225 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 SLC25A21Q9BQT8 299 aaPredicted RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms