RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 SCN2AQ99250 2005 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 VSTM2BA6NLU5 285 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 FAM171A2A8MVW0 826 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 LINC00271P0C7V0 271 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 CR2P20023 1033 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 OR10J1P30954 320 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 GPR3P46089 330 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 ERVFRD-1P60508 538 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 TBPL1P62380 186 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 HIST1H3AP68431 136 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 MRPL49Q13405 166 aaKnown RBP7.53□□□□□ -1.2
LDB3-201ENST00000263066 TMEM268Q5VZI3 342 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 CD200R1LQ6Q8B3 271 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 MMP21Q8N119 569 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 ARIH2OSQ8N7S6 290 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 EXD3Q8N9H8 876 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 SLC38A5Q8WUX1 472 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 CDS1Q92903 461 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 TVP23CQ96ET8 276 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 MVB12AQ96EY5 273 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 GALNT14Q96FL9 552 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 REEP6Q96HR9 211 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 MRGPRX3Q96LB0 322 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 TAAR9Q96RI9 348 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 FAM103A1Q9BTL3 118 aaKnown RBP7.53□□□□□ -1.2
LDB3-201ENST00000263066 DPH1Q9BZG8 443 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 TUBA4BQ9H853 241 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 BRF2Q9HAW0 419 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 TAAR2Q9P1P5 351 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 TBC1D29Q9UFV1 150 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 STEAP1Q9UHE8 339 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 OARD1Q9Y530 152 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 PPIAL4AQ9Y536 164 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 SPG11Q96JI7 2443 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 CELSR3Q9NYQ7 3312 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 PCNX2A6NKB5 2137 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 ARHGEF17Q96PE2 2063 aaPredicted RBP7.53□□□□□ -1.2
LDB3-201ENST00000263066 RNF222A6NCQ9 220 aa7.52□□□□□ -1.2
LDB3-201ENST00000263066 KLK2P20151 261 aa7.52□□□□□ -1.2
LDB3-201ENST00000263066 FCARP24071 287 aa7.52□□□□□ -1.2
LDB3-201ENST00000263066 FCGR2CP31995 323 aa7.52□□□□□ -1.2
LDB3-201ENST00000263066 DRD3P35462 400 aa7.52□□□□□ -1.2
LDB3-201ENST00000263066 KRTDAPP60985 99 aa7.52□□□□□ -1.2
LDB3-201ENST00000263066 SUMO1P63165 101 aaKnown RBP7.52□□□□□ -1.2
LDB3-201ENST00000263066 PPP1R1AQ13522 171 aa7.52□□□□□ -1.2
LDB3-201ENST00000263066 RAB11BQ15907 218 aa7.52□□□□□ -1.2
LDB3-201ENST00000263066 AGBL4Q5VU57 503 aa7.52□□□□□ -1.2
LDB3-201ENST00000263066 FAM199XQ6PEV8 388 aaPredicted RBP7.52□□□□□ -1.2
LDB3-201ENST00000263066 ZNF573Q86YE8 665 aa7.52□□□□□ -1.2
LDB3-201ENST00000263066 SLC26A10Q8NG04 563 aa7.52□□□□□ -1.2
LDB3-201ENST00000263066 VN1R17PQ8TDU5 208 aa7.52□□□□□ -1.2
LDB3-201ENST00000263066 NTNG2Q96CW9 530 aa7.52□□□□□ -1.2
LDB3-201ENST00000263066 MCHR1Q99705 422 aa7.52□□□□□ -1.2
LDB3-201ENST00000263066 PRRT1Q99946 306 aa7.52□□□□□ -1.2
LDB3-201ENST00000263066 PDFQ9HBH1 243 aa7.52□□□□□ -1.2
LDB3-201ENST00000263066 NAGKQ9UJ70 344 aa7.52□□□□□ -1.2
LDB3-201ENST00000263066 NLRC5Q86WI3 1866 aa7.52□□□□□ -1.21
LDB3-201ENST00000263066 DLL1O00548 723 aa7.52□□□□□ -1.21
LDB3-201ENST00000263066 P2RX6O15547 441 aa7.52□□□□□ -1.21
LDB3-201ENST00000263066 C1QL1O75973 258 aa7.52□□□□□ -1.21
LDB3-201ENST00000263066 PAPLNO95428 1278 aa7.52□□□□□ -1.21
LDB3-201ENST00000263066 CSTAP01040 98 aa7.52□□□□□ -1.21
LDB3-201ENST00000263066 ITGB2P05107 769 aa7.52□□□□□ -1.21
LDB3-201ENST00000263066 SLC35G6P0C7Q6 338 aa7.52□□□□□ -1.21
LDB3-201ENST00000263066 FRKP42685 505 aaPredicted RBP7.52□□□□□ -1.21
LDB3-201ENST00000263066 COMPP49747 757 aaPredicted RBP7.52□□□□□ -1.21
LDB3-201ENST00000263066 OR1D5P58170 312 aa7.52□□□□□ -1.21
LDB3-201ENST00000263066 SIRPAP78324 504 aa7.52□□□□□ -1.21
LDB3-201ENST00000263066 SHC2P98077 582 aa7.52□□□□□ -1.21
LDB3-201ENST00000263066 ENDOGQ14249 297 aaKnown RBP7.52□□□□□ -1.21
LDB3-201ENST00000263066 SYPL1Q16563 259 aa7.52□□□□□ -1.21
LDB3-201ENST00000263066 HLA-DQA1Q5Y7H0 255 aa7.52□□□□□ -1.21
LDB3-201ENST00000263066 HEPN1Q6WQI6 88 aa7.52□□□□□ -1.21
LDB3-201ENST00000263066 MBOAT2Q6ZWT7 520 aa7.52□□□□□ -1.21
LDB3-201ENST00000263066 GRINAQ7Z429 371 aa7.52□□□□□ -1.21
LDB3-201ENST00000263066 OR1P1Q8NH06 330 aa7.52□□□□□ -1.21
LDB3-201ENST00000263066 Q8WTZ3 238 aa7.52□□□□□ -1.21
LDB3-201ENST00000263066 HIST1H2AAQ96QV6 131 aa7.52□□□□□ -1.21
LDB3-201ENST00000263066 OR51B4Q9Y5P0 310 aa7.52□□□□□ -1.21
LDB3-201ENST00000263066 IDSB3KWA1 339 aa7.52□□□□□ -1.21
LDB3-201ENST00000263066 CLDN34H7C241 214 aa7.52□□□□□ -1.21
LDB3-201ENST00000263066 J3QW42 95 aa7.52□□□□□ -1.21
LDB3-201ENST00000263066 RAB27BO00194 218 aa7.52□□□□□ -1.21
LDB3-201ENST00000263066 SLC33A1O00400 549 aaPredicted RBP7.52□□□□□ -1.21
LDB3-201ENST00000263066 TAPBPO15533 448 aa7.52□□□□□ -1.21
LDB3-201ENST00000263066 RAMP1O60894 148 aa7.52□□□□□ -1.21
LDB3-201ENST00000263066 JTBO76095 146 aa7.52□□□□□ -1.21
LDB3-201ENST00000263066 STK17BO94768 372 aa7.52□□□□□ -1.21
LDB3-201ENST00000263066 MMP9P14780 707 aa7.52□□□□□ -1.21
LDB3-201ENST00000263066 CDKN1BP46527 198 aa7.52□□□□□ -1.21
LDB3-201ENST00000263066 RANP62826 216 aaKnown RBP7.52□□□□□ -1.21
LDB3-201ENST00000263066 GAGE1Q13065 139 aa7.52□□□□□ -1.21
LDB3-201ENST00000263066 ARFRP1Q13795 201 aa7.52□□□□□ -1.21
LDB3-201ENST00000263066 SBSNQ6UWP8 590 aa7.52□□□□□ -1.21
LDB3-201ENST00000263066 PRICKLE2Q7Z3G6 844 aa7.52□□□□□ -1.21
LDB3-201ENST00000263066 APH1AQ96BI3 265 aa7.52□□□□□ -1.21
LDB3-201ENST00000263066 C16orf58Q96GQ5 468 aa7.52□□□□□ -1.21
LDB3-201ENST00000263066 SLC35E1Q96K37 410 aa7.52□□□□□ -1.21
LDB3-201ENST00000263066 BET1LQ9NYM9 111 aa7.52□□□□□ -1.21
LDB3-201ENST00000263066 FOXJ3Q9UPW0 622 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms