RNA–Protein interactions for RNA: ENST00000262803.9

UPF1-201, Transcript of UPF1, RNA helicase and ATPase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF1, Length 5,348 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-201ENST00000262803 NUDCD2Q8WVJ2 157 aa17.22■□□□□ 0.35
UPF1-201ENST00000262803 A0A096LPE4 126 aa17.22■□□□□ 0.35
UPF1-201ENST00000262803 A0A1W2PPZ6 126 aa17.22■□□□□ 0.35
UPF1-201ENST00000262803 TUBAL3A6NHL2 446 aa17.22■□□□□ 0.35
UPF1-201ENST00000262803 PPP5D1E7EU14 171 aa17.22■□□□□ 0.35
UPF1-201ENST00000262803 KLK10O43240 276 aa17.22■□□□□ 0.35
UPF1-201ENST00000262803 NKX2-2O95096 273 aa17.22■□□□□ 0.35
UPF1-201ENST00000262803 CD3DP04234 171 aa17.22■□□□□ 0.35
UPF1-201ENST00000262803 OR5G3P0C626 314 aa17.22■□□□□ 0.35
UPF1-201ENST00000262803 GLI4P10075 376 aa17.22■□□□□ 0.35
UPF1-201ENST00000262803 SFTPCP11686 197 aa17.22■□□□□ 0.35
UPF1-201ENST00000262803 ELLP55199 621 aaPredicted RBP17.22■□□□□ 0.35
UPF1-201ENST00000262803 ARRDC1Q8N5I2 433 aa17.22■□□□□ 0.35
UPF1-201ENST00000262803 OR2G2Q8NGZ5 317 aa17.22■□□□□ 0.35
UPF1-201ENST00000262803 C1QTNF6Q9BXI9 259 aa17.22■□□□□ 0.35
UPF1-201ENST00000262803 TIMM9Q9Y5J7 89 aa17.22■□□□□ 0.35
UPF1-201ENST00000262803 TNFSF14O43557 240 aa17.21■□□□□ 0.35
UPF1-201ENST00000262803 FAM157BP0CG42 384 aa17.21■□□□□ 0.35
UPF1-201ENST00000262803 SCAND1P57086 179 aa17.21■□□□□ 0.35
UPF1-201ENST00000262803 TMEM268Q5VZI3 342 aa17.21■□□□□ 0.35
UPF1-201ENST00000262803 MFSD4AQ8N468 514 aa17.21■□□□□ 0.35
UPF1-201ENST00000262803 OR2T6Q8NHC8 308 aa17.21■□□□□ 0.35
UPF1-201ENST00000262803 DERL3Q96Q80 235 aa17.21■□□□□ 0.35
UPF1-201ENST00000262803 DOCK2Q92608 1830 aa17.21■□□□□ 0.35
UPF1-201ENST00000262803 A0A1B0GUH1 482 aa17.21■□□□□ 0.35
UPF1-201ENST00000262803 SEC14L6B5MCN3 397 aa17.21■□□□□ 0.35
UPF1-201ENST00000262803 GPR37O15354 613 aa17.21■□□□□ 0.35
UPF1-201ENST00000262803 HPP00738 406 aa17.21■□□□□ 0.35
UPF1-201ENST00000262803 CEACAM16Q2WEN9 425 aa17.21■□□□□ 0.35
UPF1-201ENST00000262803 SLC25A35Q3KQZ1 300 aa17.21■□□□□ 0.35
UPF1-201ENST00000262803 OR5D13Q8NGL4 314 aa17.21■□□□□ 0.35
UPF1-201ENST00000262803 ST3GAL6Q9Y274 331 aa17.21■□□□□ 0.35
UPF1-201ENST00000262803 KCNE1BA0A087WTH5 132 aa17.21■□□□□ 0.35
UPF1-201ENST00000262803 DEFB108BQ8NET1 73 aa17.21■□□□□ 0.35
UPF1-201ENST00000262803 SLC35D1Q9NTN3 355 aa17.21■□□□□ 0.35
UPF1-201ENST00000262803 WBP1LQ9NX94 342 aa17.21■□□□□ 0.35
UPF1-201ENST00000262803 GAR1Q9NY12 217 aaKnown RBP17.21■□□□□ 0.35
UPF1-201ENST00000262803 HRASP01112 189 aa17.21■□□□□ 0.34
UPF1-201ENST00000262803 ZNF121P58317 390 aaPredicted RBP17.21■□□□□ 0.34
UPF1-201ENST00000262803 SLC25A26Q70HW3 274 aa17.21■□□□□ 0.34
UPF1-201ENST00000262803 TMEM229BQ8NBD8 167 aa17.21■□□□□ 0.34
UPF1-201ENST00000262803 PRDM7Q9NQW5 492 aa17.21■□□□□ 0.34
UPF1-201ENST00000262803 AMDHD2Q9Y303 409 aa17.21■□□□□ 0.34
UPF1-201ENST00000262803 ARAP2Q8WZ64 1704 aa17.21■□□□□ 0.34
UPF1-201ENST00000262803 AQP7O14520 342 aa17.2■□□□□ 0.34
UPF1-201ENST00000262803 GALP22466 123 aa17.2■□□□□ 0.34
UPF1-201ENST00000262803 FCGR2CP31995 323 aa17.2■□□□□ 0.34
UPF1-201ENST00000262803 DCTDP32321 178 aa17.2■□□□□ 0.34
UPF1-201ENST00000262803 DUSP2Q05923 314 aa17.2■□□□□ 0.34
UPF1-201ENST00000262803 SPANXN5Q5MJ07 72 aa17.2■□□□□ 0.34
UPF1-201ENST00000262803 ZNF683Q8IZ20 524 aa17.2■□□□□ 0.34
UPF1-201ENST00000262803 BARX1Q9HBU1 254 aaPredicted RBP17.2■□□□□ 0.34
UPF1-201ENST00000262803 CYSLTR2Q9NS75 346 aa17.2■□□□□ 0.34
UPF1-201ENST00000262803 FKBP11Q9NYL4 201 aa17.2■□□□□ 0.34
UPF1-201ENST00000262803 PSENENQ9NZ42 101 aa17.2■□□□□ 0.34
UPF1-201ENST00000262803 GPR31O00270 319 aa17.2■□□□□ 0.34
UPF1-201ENST00000262803 COX7A2P2O60397 106 aa17.2■□□□□ 0.34
UPF1-201ENST00000262803 B4GALT1P15291 398 aa17.2■□□□□ 0.34
UPF1-201ENST00000262803 HTRA4P83105 476 aaPredicted RBP17.2■□□□□ 0.34
UPF1-201ENST00000262803 GRAMD2BQ96HH9 432 aa17.2■□□□□ 0.34
UPF1-201ENST00000262803 AKR1E2Q96JD6 320 aa17.2■□□□□ 0.34
UPF1-201ENST00000262803 PARP12Q9H0J9 701 aaKnown RBP17.2■□□□□ 0.34
UPF1-201ENST00000262803 IL20Q9NYY1 176 aa17.2■□□□□ 0.34
UPF1-201ENST00000262803 NHSQ6T4R5 1651 aa17.2■□□□□ 0.34
UPF1-201ENST00000262803 SDCBPO00560 298 aaPredicted RBP17.2■□□□□ 0.34
UPF1-201ENST00000262803 MGMTP16455 207 aa17.2■□□□□ 0.34
UPF1-201ENST00000262803 C19orf35Q6ZS72 473 aa17.2■□□□□ 0.34
UPF1-201ENST00000262803 GPR87Q9BY21 358 aa17.2■□□□□ 0.34
UPF1-201ENST00000262803 GAL3ST2Q9H3Q3 398 aa17.2■□□□□ 0.34
UPF1-201ENST00000262803 P4HTMQ9NXG6 502 aa17.2■□□□□ 0.34
UPF1-201ENST00000262803 CDK5RAP2Q96SN8 1893 aa17.2■□□□□ 0.34
UPF1-201ENST00000262803 CBR1P16152 277 aa17.2■□□□□ 0.34
UPF1-201ENST00000262803 FUT3P21217 361 aa17.2■□□□□ 0.34
UPF1-201ENST00000262803 EPHA8P29322 1005 aaPredicted RBP17.2■□□□□ 0.34
UPF1-201ENST00000262803 CEACAM3P40198 252 aa17.2■□□□□ 0.34
UPF1-201ENST00000262803 AKR1C3P42330 323 aa17.2■□□□□ 0.34
UPF1-201ENST00000262803 MRGPRX3Q96LB0 322 aa17.2■□□□□ 0.34
UPF1-201ENST00000262803 RREB1Q92766 1687 aa17.2■□□□□ 0.34
UPF1-201ENST00000262803 NHSL1Q5SYE7 1610 aa17.2■□□□□ 0.34
UPF1-201ENST00000262803 ZNF724A8MTY0 619 aa17.19■□□□□ 0.34
UPF1-201ENST00000262803 AKR7A2O43488 359 aa17.19■□□□□ 0.34
UPF1-201ENST00000262803 SPNP16150 400 aa17.19■□□□□ 0.34
UPF1-201ENST00000262803 TMEM108Q6UXF1 575 aa17.19■□□□□ 0.34
UPF1-201ENST00000262803 OR13G1Q8NGZ3 307 aa17.19■□□□□ 0.34
UPF1-201ENST00000262803 TMEM182Q6ZP80 229 aaPredicted RBP17.19■□□□□ 0.34
UPF1-201ENST00000262803 TCTE3Q8IZS6 198 aa17.19■□□□□ 0.34
UPF1-201ENST00000262803 OR4Q3Q8NH05 313 aa17.19■□□□□ 0.34
UPF1-201ENST00000262803 HMGCLL1Q8TB92 370 aa17.19■□□□□ 0.34
UPF1-201ENST00000262803 SMIM4Q8WVI0 70 aa17.19■□□□□ 0.34
UPF1-201ENST00000262803 UQCC2Q9BRT2 126 aa17.19■□□□□ 0.34
UPF1-201ENST00000262803 LINC01565O15544 149 aa17.19■□□□□ 0.34
UPF1-201ENST00000262803 LYG2Q86SG7 212 aa17.19■□□□□ 0.34
UPF1-201ENST00000262803 TMED6Q8WW62 240 aa17.19■□□□□ 0.34
UPF1-201ENST00000262803 OR8B4Q96RC9 309 aa17.19■□□□□ 0.34
UPF1-201ENST00000262803 OR2W5A6NFC9 320 aa17.19■□□□□ 0.34
UPF1-201ENST00000262803 TMEM11P17152 192 aa17.19■□□□□ 0.34
UPF1-201ENST00000262803 MICBQ29980 383 aa17.19■□□□□ 0.34
UPF1-201ENST00000262803 LRRC3CA6NJW4 275 aa17.18■□□□□ 0.34
UPF1-201ENST00000262803 K7EQS6 105 aa17.18■□□□□ 0.34
UPF1-201ENST00000262803 RPL12P30050 165 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms