RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 ANKRD61A6NGH8 418 aa10.14□□□□□ -0.79
TRAF4-202ENST00000262396 B2RBV5 119 aa10.14□□□□□ -0.79
TRAF4-202ENST00000262396 ATP8B1O43520 1251 aa10.14□□□□□ -0.79
TRAF4-202ENST00000262396 FBP1P09467 338 aa10.14□□□□□ -0.79
TRAF4-202ENST00000262396 CLUP10909 449 aa10.14□□□□□ -0.79
TRAF4-202ENST00000262396 OTX1P32242 354 aaPredicted RBP10.14□□□□□ -0.79
TRAF4-202ENST00000262396 HMGA2P52926 109 aa10.14□□□□□ -0.79
TRAF4-202ENST00000262396 RPS7P62081 194 aaKnown RBP10.14□□□□□ -0.79
TRAF4-202ENST00000262396 BLMHQ13867 455 aa10.14□□□□□ -0.79
TRAF4-202ENST00000262396 PCK2Q16822 640 aa10.14□□□□□ -0.79
TRAF4-202ENST00000262396 MICAQ29983 383 aa10.14□□□□□ -0.79
TRAF4-202ENST00000262396 C11orf91Q3C1V1 193 aa10.14□□□□□ -0.79
TRAF4-202ENST00000262396 CDONQ4KMG0 1287 aa10.14□□□□□ -0.79
TRAF4-202ENST00000262396 KLHL12Q53G59 568 aa10.14□□□□□ -0.79
TRAF4-202ENST00000262396 TEX30Q5JUR7 227 aa10.14□□□□□ -0.79
TRAF4-202ENST00000262396 OR2T5Q6IEZ7 315 aa10.14□□□□□ -0.79
TRAF4-202ENST00000262396 GDPGP1Q6ZNW5 385 aa10.14□□□□□ -0.79
TRAF4-202ENST00000262396 VMO1Q7Z5L0 202 aa10.14□□□□□ -0.79
TRAF4-202ENST00000262396 COMMD2Q86X83 199 aa10.14□□□□□ -0.79
TRAF4-202ENST00000262396 PAPD5Q8NDF8 572 aaKnown RBP10.14□□□□□ -0.79
TRAF4-202ENST00000262396 OR1M1Q8NGA1 313 aa10.14□□□□□ -0.79
TRAF4-202ENST00000262396 OR10G2Q8NGC3 310 aa10.14□□□□□ -0.79
TRAF4-202ENST00000262396 OR8D4Q8NGM9 314 aa10.14□□□□□ -0.79
TRAF4-202ENST00000262396 OR2T29Q8NH02 315 aa10.14□□□□□ -0.79
TRAF4-202ENST00000262396 ZNRF4Q8WWF5 429 aa10.14□□□□□ -0.79
TRAF4-202ENST00000262396 MUC13Q9H3R2 512 aa10.14□□□□□ -0.79
TRAF4-202ENST00000262396 MAGIXQ9H6Y5 334 aa10.14□□□□□ -0.79
TRAF4-202ENST00000262396 SMURF1Q9HCE7 757 aa10.14□□□□□ -0.79
TRAF4-202ENST00000262396 ABCB9Q9NP78 766 aa10.14□□□□□ -0.79
TRAF4-202ENST00000262396 C1RLQ9NZP8 487 aa10.14□□□□□ -0.79
TRAF4-202ENST00000262396 RPUSD1Q9UJJ7 312 aaKnown RBP10.14□□□□□ -0.79
TRAF4-202ENST00000262396 KPTNQ9Y664 436 aa10.14□□□□□ -0.79
TRAF4-202ENST00000262396 A0A0U1RQK1 487 aa10.13□□□□□ -0.79
TRAF4-202ENST00000262396 A0A1W2PRD5 423 aa10.13□□□□□ -0.79
TRAF4-202ENST00000262396 A0A1W2PRF3 423 aa10.13□□□□□ -0.79
TRAF4-202ENST00000262396 A0A1W2PRM7 423 aa10.13□□□□□ -0.79
TRAF4-202ENST00000262396 C5orf63A6NC05 138 aa10.13□□□□□ -0.79
TRAF4-202ENST00000262396 FAM183AA6NL82 134 aa10.13□□□□□ -0.79
TRAF4-202ENST00000262396 PRR23D1E9PI22 279 aaPredicted RBP10.13□□□□□ -0.79
TRAF4-202ENST00000262396 CDIPTO14735 213 aa10.13□□□□□ -0.79
TRAF4-202ENST00000262396 GPR37O15354 613 aa10.13□□□□□ -0.79
TRAF4-202ENST00000262396 GPR137BO60478 399 aa10.13□□□□□ -0.79
TRAF4-202ENST00000262396 NDUFA7O95182 113 aa10.13□□□□□ -0.79
TRAF4-202ENST00000262396 PRR23D2P0DMB1 279 aaPredicted RBP10.13□□□□□ -0.79
TRAF4-202ENST00000262396 NDUFB7P17568 137 aa10.13□□□□□ -0.79
TRAF4-202ENST00000262396 GSK3AP49840 483 aa10.13□□□□□ -0.79
TRAF4-202ENST00000262396 ZNF121P58317 390 aaPredicted RBP10.13□□□□□ -0.79
TRAF4-202ENST00000262396 RPL15P61313 204 aaKnown RBP10.13□□□□□ -0.79
TRAF4-202ENST00000262396 FAM3AP98173 230 aa10.13□□□□□ -0.79
TRAF4-202ENST00000262396 GUCA2AQ02747 115 aa10.13□□□□□ -0.79
TRAF4-202ENST00000262396 TUSC1Q2TAM9 212 aa10.13□□□□□ -0.79
TRAF4-202ENST00000262396 WDR38Q5JTN6 314 aa10.13□□□□□ -0.79
TRAF4-202ENST00000262396 TEX36Q5VZQ5 186 aa10.13□□□□□ -0.79
TRAF4-202ENST00000262396 DHRS7BQ6IAN0 325 aaPredicted RBP10.13□□□□□ -0.79
TRAF4-202ENST00000262396 ARHGAP24Q8N264 748 aa10.13□□□□□ -0.79
TRAF4-202ENST00000262396 OR5T2Q8NGG2 359 aa10.13□□□□□ -0.79
TRAF4-202ENST00000262396 OR4Q3Q8NH05 313 aa10.13□□□□□ -0.79
TRAF4-202ENST00000262396 GIPC3Q8TF64 312 aa10.13□□□□□ -0.79
TRAF4-202ENST00000262396 WFDC12Q8WWY7 111 aa10.13□□□□□ -0.79
TRAF4-202ENST00000262396 PIGCQ92535 297 aa10.13□□□□□ -0.79
TRAF4-202ENST00000262396 DACT3Q96B18 629 aaPredicted RBP10.13□□□□□ -0.79
TRAF4-202ENST00000262396 SGK3Q96BR1 496 aa10.13□□□□□ -0.79
TRAF4-202ENST00000262396 ABHD6Q9BV23 337 aa10.13□□□□□ -0.79
TRAF4-202ENST00000262396 RGCCQ9H4X1 137 aa10.13□□□□□ -0.79
TRAF4-202ENST00000262396 MED20Q9H944 212 aa10.13□□□□□ -0.79
TRAF4-202ENST00000262396 TCF7L1Q9HCS4 588 aa10.13□□□□□ -0.79
TRAF4-202ENST00000262396 SIRT7Q9NRC8 400 aa10.13□□□□□ -0.79
TRAF4-202ENST00000262396 MGAM2Q2M2H8 2515 aa10.13□□□□□ -0.79
TRAF4-202ENST00000262396 E2F6O75461 281 aa10.12□□□□□ -0.79
TRAF4-202ENST00000262396 GLCEO94923 617 aa10.12□□□□□ -0.79
TRAF4-202ENST00000262396 PTBP3O95758 552 aaKnown RBP10.12□□□□□ -0.79
TRAF4-202ENST00000262396 CST1P01037 141 aa10.12□□□□□ -0.79
TRAF4-202ENST00000262396 IGHV4-59P01825 116 aa10.12□□□□□ -0.79
TRAF4-202ENST00000262396 LYNP07948 512 aa10.12□□□□□ -0.79
TRAF4-202ENST00000262396 MMP9P14780 707 aa10.12□□□□□ -0.79
TRAF4-202ENST00000262396 ATP6V1B2P21281 511 aa10.12□□□□□ -0.79
TRAF4-202ENST00000262396 GABRA2P47869 451 aa10.12□□□□□ -0.79
TRAF4-202ENST00000262396 CAPZA1P52907 286 aa10.12□□□□□ -0.79
TRAF4-202ENST00000262396 CSNK2BP67870 215 aa10.12□□□□□ -0.79
TRAF4-202ENST00000262396 SRSF4Q08170 494 aaKnown RBP10.12□□□□□ -0.79
TRAF4-202ENST00000262396 KRT77Q7Z794 578 aa10.12□□□□□ -0.79
TRAF4-202ENST00000262396 IQCF1Q8N6M8 205 aa10.12□□□□□ -0.79
TRAF4-202ENST00000262396 FAM216BQ8N7L0 139 aa10.12□□□□□ -0.79
TRAF4-202ENST00000262396 SPSB4Q96A44 273 aa10.12□□□□□ -0.79
TRAF4-202ENST00000262396 C12orf43Q96C57 262 aaKnown RBP10.12□□□□□ -0.79
TRAF4-202ENST00000262396 MED30Q96HR3 178 aa10.12□□□□□ -0.79
TRAF4-202ENST00000262396 NSL1Q96IY1 281 aa10.12□□□□□ -0.79
TRAF4-202ENST00000262396 RNF170Q96K19 258 aa10.12□□□□□ -0.79
TRAF4-202ENST00000262396 DDOQ99489 341 aa10.12□□□□□ -0.79
TRAF4-202ENST00000262396 DGCR6LQ9BY27 220 aa10.12□□□□□ -0.79
TRAF4-202ENST00000262396 SIRPDQ9H106 197 aa10.12□□□□□ -0.79
TRAF4-202ENST00000262396 PRDM13Q9H4Q3 707 aa10.12□□□□□ -0.79
TRAF4-202ENST00000262396 CMC2Q9NRP2 79 aa10.12□□□□□ -0.79
TRAF4-202ENST00000262396 SNTG1Q9NSN8 517 aa10.12□□□□□ -0.79
TRAF4-202ENST00000262396 KAAG1Q9UBP8 84 aa10.12□□□□□ -0.79
TRAF4-202ENST00000262396 ZNF391Q9UJN7 358 aa10.12□□□□□ -0.79
TRAF4-202ENST00000262396 RHBDD3Q9Y3P4 386 aa10.12□□□□□ -0.79
TRAF4-202ENST00000262396 MPC1Q9Y5U8 109 aa10.12□□□□□ -0.79
TRAF4-202ENST00000262396 hCG_38984A0A1B0GV85 526 aa10.11□□□□□ -0.79
TRAF4-202ENST00000262396 TMEM210A6NLX4 147 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms