RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 G6PC2Q9NQR9 355 aa11.46□□□□□ -0.57
SGCA-201ENST00000262018 CENPMQ9NSP4 180 aa11.46□□□□□ -0.57
SGCA-201ENST00000262018 PARPBPQ9NWS1 579 aa11.46□□□□□ -0.57
SGCA-201ENST00000262018 DAPK2Q9UIK4 370 aa11.46□□□□□ -0.57
SGCA-201ENST00000262018 FBXL3Q9UKT7 428 aa11.46□□□□□ -0.57
SGCA-201ENST00000262018 CMAHPQ9Y471 501 aa11.46□□□□□ -0.57
SGCA-201ENST00000262018 NOTCH1P46531 2555 aa11.46□□□□□ -0.58
SGCA-201ENST00000262018 TRBV5-7A0A0A0MS05 114 aa11.45□□□□□ -0.58
SGCA-201ENST00000262018 SHISA9B4DS77 424 aa11.45□□□□□ -0.58
SGCA-201ENST00000262018 ZNF878C9JN71 531 aa11.45□□□□□ -0.58
SGCA-201ENST00000262018 MRPL33O75394 65 aaKnown RBP11.45□□□□□ -0.58
SGCA-201ENST00000262018 NCR1O76036 304 aa11.45□□□□□ -0.58
SGCA-201ENST00000262018 CSF3P09919 207 aa11.45□□□□□ -0.58
SGCA-201ENST00000262018 RAB3BP20337 219 aa11.45□□□□□ -0.58
SGCA-201ENST00000262018 NPR2P20594 1047 aa11.45□□□□□ -0.58
SGCA-201ENST00000262018 OR3A2P47893 321 aa11.45□□□□□ -0.58
SGCA-201ENST00000262018 MMP16P51512 607 aa11.45□□□□□ -0.58
SGCA-201ENST00000262018 STK11Q15831 433 aa11.45□□□□□ -0.58
SGCA-201ENST00000262018 HIST2H2BDQ6DRA6 164 aa11.45□□□□□ -0.58
SGCA-201ENST00000262018 C11orf71Q6IPW1 123 aa11.45□□□□□ -0.58
SGCA-201ENST00000262018 NUFIP2Q7Z417 695 aaKnown RBP11.45□□□□□ -0.58
SGCA-201ENST00000262018 GDPD1Q8N9F7 314 aa11.45□□□□□ -0.58
SGCA-201ENST00000262018 APH1AQ96BI3 265 aa11.45□□□□□ -0.58
SGCA-201ENST00000262018 CBLN4Q9NTU7 201 aa11.45□□□□□ -0.58
SGCA-201ENST00000262018 ASH2LQ9UBL3 628 aa11.45□□□□□ -0.58
SGCA-201ENST00000262018 OR52A1Q9UKL2 312 aa11.45□□□□□ -0.58
SGCA-201ENST00000262018 SLC22A13Q9Y226 551 aa11.45□□□□□ -0.58
SGCA-201ENST00000262018 ACOD1A6NK06 481 aa11.44□□□□□ -0.58
SGCA-201ENST00000262018 SRMP19623 302 aa11.44□□□□□ -0.58
SGCA-201ENST00000262018 TNFSF8P32971 234 aa11.44□□□□□ -0.58
SGCA-201ENST00000262018 CEP78Q5JTW2 689 aa11.44□□□□□ -0.58
SGCA-201ENST00000262018 PRR31Q5SQ13 230 aa11.44□□□□□ -0.58
SGCA-201ENST00000262018 FAM27BQ5VT28 67 aa11.44□□□□□ -0.58
SGCA-201ENST00000262018 KLHL24Q6TFL4 600 aa11.44□□□□□ -0.58
SGCA-201ENST00000262018 TFAP2EQ6VUC0 442 aa11.44□□□□□ -0.58
SGCA-201ENST00000262018 LINGO2Q7L985 606 aa11.44□□□□□ -0.58
SGCA-201ENST00000262018 ZNF554Q86TJ5 538 aa11.44□□□□□ -0.58
SGCA-201ENST00000262018 ZNF100Q8IYN0 542 aa11.44□□□□□ -0.58
SGCA-201ENST00000262018 PARP16Q8N5Y8 322 aa11.44□□□□□ -0.58
SGCA-201ENST00000262018 OR10AC1Q8NH08 325 aa11.44□□□□□ -0.58
SGCA-201ENST00000262018 PPP1R14AQ96A00 147 aa11.44□□□□□ -0.58
SGCA-201ENST00000262018 ITPKCQ96DU7 683 aa11.44□□□□□ -0.58
SGCA-201ENST00000262018 ZNF837Q96EG3 531 aaPredicted RBP11.44□□□□□ -0.58
SGCA-201ENST00000262018 MRI1Q9BV20 369 aa11.44□□□□□ -0.58
SGCA-201ENST00000262018 MIXL1Q9H2W2 232 aa11.44□□□□□ -0.58
SGCA-201ENST00000262018 CRLF2Q9HC73 371 aa11.44□□□□□ -0.58
SGCA-201ENST00000262018 GPR35Q9HC97 309 aa11.44□□□□□ -0.58
SGCA-201ENST00000262018 TMEM38BQ9NVV0 291 aa11.44□□□□□ -0.58
SGCA-201ENST00000262018 FAM206AQ9NX38 181 aa11.44□□□□□ -0.58
SGCA-201ENST00000262018 A0A1B0GVG6 124 aa11.43□□□□□ -0.58
SGCA-201ENST00000262018 TMEM269A0A1B0GVZ9 245 aa11.43□□□□□ -0.58
SGCA-201ENST00000262018 A0A1W2PPK0 400 aa11.43□□□□□ -0.58
SGCA-201ENST00000262018 OR6C65A6NJZ3 312 aa11.43□□□□□ -0.58
SGCA-201ENST00000262018 NOTOA8MTQ0 251 aa11.43□□□□□ -0.58
SGCA-201ENST00000262018 PDCD5O14737 125 aa11.43□□□□□ -0.58
SGCA-201ENST00000262018 RER1O15258 196 aa11.43□□□□□ -0.58
SGCA-201ENST00000262018 RGS5O15539 181 aa11.43□□□□□ -0.58
SGCA-201ENST00000262018 LY6HO94772 140 aa11.43□□□□□ -0.58
SGCA-201ENST00000262018 ISG15P05161 165 aa11.43□□□□□ -0.58
SGCA-201ENST00000262018 CST2P09228 141 aa11.43□□□□□ -0.58
SGCA-201ENST00000262018 ACHEP22303 614 aa11.43□□□□□ -0.58
SGCA-201ENST00000262018 MAGEB1P43366 347 aa11.43□□□□□ -0.58
SGCA-201ENST00000262018 OR10A3P58181 314 aa11.43□□□□□ -0.58
SGCA-201ENST00000262018 GRB2P62993 217 aaKnown RBP11.43□□□□□ -0.58
SGCA-201ENST00000262018 RIN1Q13671 783 aa11.43□□□□□ -0.58
SGCA-201ENST00000262018 MIDNQ504T8 468 aa11.43□□□□□ -0.58
SGCA-201ENST00000262018 SFXN4Q6P4A7 337 aa11.43□□□□□ -0.58
SGCA-201ENST00000262018 SEZ6L2Q6UXD5 910 aa11.43□□□□□ -0.58
SGCA-201ENST00000262018 LAX1Q8IWV1 398 aa11.43□□□□□ -0.58
SGCA-201ENST00000262018 RDH10Q8IZV5 341 aa11.43□□□□□ -0.58
SGCA-201ENST00000262018 GJC3Q8NFK1 279 aa11.43□□□□□ -0.58
SGCA-201ENST00000262018 ABCB9Q9NP78 766 aa11.43□□□□□ -0.58
SGCA-201ENST00000262018 DDX28Q9NUL7 540 aaKnown RBP11.43□□□□□ -0.58
SGCA-201ENST00000262018 TMEM89A2RUT3 159 aa11.43□□□□□ -0.58
SGCA-201ENST00000262018 RPL36A-HNRNPH2H7BZ11 118 aa11.43□□□□□ -0.58
SGCA-201ENST00000262018 ABCD4O14678 606 aa11.43□□□□□ -0.58
SGCA-201ENST00000262018 UBCP0CG48 685 aaKnown RBP11.43□□□□□ -0.58
SGCA-201ENST00000262018 APEX1P27695 318 aaKnown RBP11.43□□□□□ -0.58
SGCA-201ENST00000262018 SOX2P48431 317 aa11.43□□□□□ -0.58
SGCA-201ENST00000262018 EFNA4P52798 201 aa11.43□□□□□ -0.58
SGCA-201ENST00000262018 PSMA6P60900 246 aaKnown RBP11.43□□□□□ -0.58
SGCA-201ENST00000262018 TAF13Q15543 124 aa11.43□□□□□ -0.58
SGCA-201ENST00000262018 CEACAM16Q2WEN9 425 aa11.43□□□□□ -0.58
SGCA-201ENST00000262018 NRN1LQ496H8 165 aa11.43□□□□□ -0.58
SGCA-201ENST00000262018 CCDC92Q53HC0 331 aaPredicted RBP11.43□□□□□ -0.58
SGCA-201ENST00000262018 SFRP5Q5T4F7 317 aa11.43□□□□□ -0.58
SGCA-201ENST00000262018 IDNKQ5T6J7 187 aa11.43□□□□□ -0.58
SGCA-201ENST00000262018 TSPO2Q5TGU0 170 aa11.43□□□□□ -0.58
SGCA-201ENST00000262018 TMEM244Q5VVB8 128 aa11.43□□□□□ -0.58
SGCA-201ENST00000262018 FBXW9Q5XUX1 488 aa11.43□□□□□ -0.58
SGCA-201ENST00000262018 Q6ZT83 130 aa11.43□□□□□ -0.58
SGCA-201ENST00000262018 LYSMD2Q8IV50 215 aa11.43□□□□□ -0.58
SGCA-201ENST00000262018 FBXL14Q8N1E6 418 aa11.43□□□□□ -0.58
SGCA-201ENST00000262018 SEMA6DQ8NFY4 1073 aa11.43□□□□□ -0.58
SGCA-201ENST00000262018 OR51A4Q8NGJ6 313 aa11.43□□□□□ -0.58
SGCA-201ENST00000262018 CMTM3Q96MX0 182 aa11.43□□□□□ -0.58
SGCA-201ENST00000262018 ALKBH3Q96Q83 286 aaPredicted RBP11.43□□□□□ -0.58
SGCA-201ENST00000262018 FOXB1Q99853 325 aa11.43□□□□□ -0.58
SGCA-201ENST00000262018 MOB1AQ9H8S9 216 aa11.43□□□□□ -0.58
SGCA-201ENST00000262018 MALT1Q9UDY8 824 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms