RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 TAF9BQ9HBM6 251 aa11.5□□□□□ -0.57
SNX1-201ENST00000261889 GPR84Q9NQS5 396 aa11.5□□□□□ -0.57
SNX1-201ENST00000261889 SUSD2Q9UGT4 822 aa11.5□□□□□ -0.57
SNX1-201ENST00000261889 MMP24Q9Y5R2 645 aa11.5□□□□□ -0.57
SNX1-201ENST00000261889 MTRF1O75570 445 aaKnown RBP11.5□□□□□ -0.57
SNX1-201ENST00000261889 ZNF14P17017 642 aaPredicted RBP11.5□□□□□ -0.57
SNX1-201ENST00000261889 ZNF20P17024 532 aa11.5□□□□□ -0.57
SNX1-201ENST00000261889 TEX30Q5JUR7 227 aa11.5□□□□□ -0.57
SNX1-201ENST00000261889 C6orf201Q7Z4U5 140 aa11.5□□□□□ -0.57
SNX1-201ENST00000261889 OR1M1Q8NGA1 313 aa11.5□□□□□ -0.57
SNX1-201ENST00000261889 OR10S1Q8NGN2 331 aa11.5□□□□□ -0.57
SNX1-201ENST00000261889 PMM1Q92871 262 aa11.5□□□□□ -0.57
SNX1-201ENST00000261889 SLAMF9Q96A28 289 aa11.5□□□□□ -0.57
SNX1-201ENST00000261889 LRRC61Q9BV99 259 aa11.5□□□□□ -0.57
SNX1-201ENST00000261889 PBOV1Q9GZY1 135 aa11.5□□□□□ -0.57
SNX1-201ENST00000261889 KLHL13Q9P2N7 655 aa11.5□□□□□ -0.57
SNX1-201ENST00000261889 MRPS28Q9Y2Q9 187 aaKnown RBP11.5□□□□□ -0.57
SNX1-201ENST00000261889 THADAQ6YHU6 1953 aa11.5□□□□□ -0.57
SNX1-201ENST00000261889 IGHV3-15A0A0B4J1V0 119 aa11.5□□□□□ -0.57
SNX1-201ENST00000261889 C19orf67A6NJJ6 358 aa11.5□□□□□ -0.57
SNX1-201ENST00000261889 PLPP3O14495 311 aa11.5□□□□□ -0.57
SNX1-201ENST00000261889 PPICP45877 212 aa11.5□□□□□ -0.57
SNX1-201ENST00000261889 HOXA1P49639 335 aaPredicted RBP11.5□□□□□ -0.57
SNX1-201ENST00000261889 FZD2Q14332 565 aa11.5□□□□□ -0.57
SNX1-201ENST00000261889 IAH1Q2TAA2 248 aaPredicted RBP11.5□□□□□ -0.57
SNX1-201ENST00000261889 OR10H5Q8NGA6 315 aa11.5□□□□□ -0.57
SNX1-201ENST00000261889 PDE7BQ9NP56 450 aa11.5□□□□□ -0.57
SNX1-201ENST00000261889 PARPBPQ9NWS1 579 aa11.5□□□□□ -0.57
SNX1-201ENST00000261889 PIAS3Q9Y6X2 628 aa11.5□□□□□ -0.57
SNX1-201ENST00000261889 NSA2O95478 260 aaKnown RBP11.49□□□□□ -0.57
SNX1-201ENST00000261889 FABP1P07148 127 aa11.49□□□□□ -0.57
SNX1-201ENST00000261889 FBP1P09467 338 aa11.49□□□□□ -0.57
SNX1-201ENST00000261889 PNLIPP16233 465 aa11.49□□□□□ -0.57
SNX1-201ENST00000261889 IGFBP3P17936 291 aaPredicted RBP11.49□□□□□ -0.57
SNX1-201ENST00000261889 AKT2P31751 481 aa11.49□□□□□ -0.57
SNX1-201ENST00000261889 PHLDA2Q53GA4 152 aa11.49□□□□□ -0.57
SNX1-201ENST00000261889 ZNF813Q6ZN06 617 aa11.49□□□□□ -0.57
SNX1-201ENST00000261889 OR13G1Q8NGZ3 307 aa11.49□□□□□ -0.57
SNX1-201ENST00000261889 ZNF519Q8TB69 540 aa11.49□□□□□ -0.57
SNX1-201ENST00000261889 ST7LQ8TDW4 575 aa11.49□□□□□ -0.57
SNX1-201ENST00000261889 MRI1Q9BV20 369 aa11.49□□□□□ -0.57
SNX1-201ENST00000261889 EDEM2Q9BV94 578 aa11.49□□□□□ -0.57
SNX1-201ENST00000261889 TXNIPQ9H3M7 391 aa11.49□□□□□ -0.57
SNX1-201ENST00000261889 RCC2Q9P258 522 aaKnown RBP11.49□□□□□ -0.57
SNX1-201ENST00000261889 LPAR3Q9UBY5 353 aa11.49□□□□□ -0.57
SNX1-201ENST00000261889 CFAP47Q6ZTR5 3102 aa11.49□□□□□ -0.57
SNX1-201ENST00000261889 NCOR1O75376 2440 aa11.49□□□□□ -0.57
SNX1-201ENST00000261889 ZNF814B7Z6K7 855 aa11.49□□□□□ -0.57
SNX1-201ENST00000261889 YIF1AO95070 293 aa11.49□□□□□ -0.57
SNX1-201ENST00000261889 SNAPINO95295 136 aa11.49□□□□□ -0.57
SNX1-201ENST00000261889 NME1P15531 152 aaKnown RBP11.49□□□□□ -0.57
SNX1-201ENST00000261889 ZNF44P15621 663 aa11.49□□□□□ -0.57
SNX1-201ENST00000261889 GABRG2P18507 467 aa11.49□□□□□ -0.57
SNX1-201ENST00000261889 HSD11B1P28845 292 aa11.49□□□□□ -0.57
SNX1-201ENST00000261889 PJVKQ0ZLH3 352 aa11.49□□□□□ -0.57
SNX1-201ENST00000261889 DEFB123Q8N688 67 aa11.49□□□□□ -0.57
SNX1-201ENST00000261889 OR51T1Q8NGJ9 327 aa11.49□□□□□ -0.57
SNX1-201ENST00000261889 WDR77Q9BQA1 342 aaPredicted RBP11.49□□□□□ -0.57
SNX1-201ENST00000261889 SPACA1Q9HBV2 294 aa11.49□□□□□ -0.57
SNX1-201ENST00000261889 PUS1Q9Y606 427 aaKnown RBP eCLIP11.49□□□□□ -0.57
SNX1-201ENST00000261889 ZNF727A8MUV8 499 aa11.48□□□□□ -0.57
SNX1-201ENST00000261889 C2CD4DB7Z1M9 353 aa11.48□□□□□ -0.57
SNX1-201ENST00000261889 GPR37O15354 613 aa11.48□□□□□ -0.57
SNX1-201ENST00000261889 IL33O95760 270 aa11.48□□□□□ -0.57
SNX1-201ENST00000261889 PRH1P02810 166 aa11.48□□□□□ -0.57
SNX1-201ENST00000261889 GIMD1P0DJR0 217 aa11.48□□□□□ -0.57
SNX1-201ENST00000261889 RORAP35398 523 aa11.48□□□□□ -0.57
SNX1-201ENST00000261889 ACY1Q03154 408 aa11.48□□□□□ -0.57
SNX1-201ENST00000261889 SPEM2Q0P670 501 aa11.48□□□□□ -0.57
SNX1-201ENST00000261889 TERB2Q8NHR7 220 aa11.48□□□□□ -0.57
SNX1-201ENST00000261889 ALX4Q9H161 411 aaPredicted RBP11.48□□□□□ -0.57
SNX1-201ENST00000261889 LPAR5Q9H1C0 372 aa11.48□□□□□ -0.57
SNX1-201ENST00000261889 ZNF304Q9HCX3 659 aa11.48□□□□□ -0.57
SNX1-201ENST00000261889 FBXL17Q9UF56 701 aa11.48□□□□□ -0.57
SNX1-201ENST00000261889 MIOXQ9UGB7 285 aa11.48□□□□□ -0.57
SNX1-201ENST00000261889 FER1L5A0AVI2 2057 aa11.48□□□□□ -0.57
SNX1-201ENST00000261889 TRIOBPQ9H2D6 2365 aa11.48□□□□□ -0.57
SNX1-201ENST00000261889 COLCA2A8K830 154 aa11.48□□□□□ -0.57
SNX1-201ENST00000261889 DUS4LO95620 317 aaKnown RBP11.48□□□□□ -0.57
SNX1-201ENST00000261889 DBHP09172 617 aa11.48□□□□□ -0.57
SNX1-201ENST00000261889 SLC25A4P12235 298 aa11.48□□□□□ -0.57
SNX1-201ENST00000261889 MDKP21741 143 aaPredicted RBP11.48□□□□□ -0.57
SNX1-201ENST00000261889 AWAT1Q58HT5 328 aa11.48□□□□□ -0.57
SNX1-201ENST00000261889 KLHL24Q6TFL4 600 aa11.48□□□□□ -0.57
SNX1-201ENST00000261889 ZNF248Q8NDW4 579 aa11.48□□□□□ -0.57
SNX1-201ENST00000261889 OR5H2Q8NGV7 314 aa11.48□□□□□ -0.57
SNX1-201ENST00000261889 MRPL24Q96A35 216 aaKnown RBP11.48□□□□□ -0.57
SNX1-201ENST00000261889 ABHD14AQ9BUJ0 271 aa11.48□□□□□ -0.57
SNX1-201ENST00000261889 SLC2A8Q9NY64 477 aa11.48□□□□□ -0.57
SNX1-201ENST00000261889 PCOLCE2Q9UKZ9 415 aa11.48□□□□□ -0.57
SNX1-201ENST00000261889 CACNA1DQ01668 2161 aa11.48□□□□□ -0.57
SNX1-201ENST00000261889 RAB19A4D1S5 217 aa11.48□□□□□ -0.57
SNX1-201ENST00000261889 MS4A18H0YCH9 400 aa11.48□□□□□ -0.57
SNX1-201ENST00000261889 LDLRAD4O15165 306 aa11.48□□□□□ -0.57
SNX1-201ENST00000261889 DDAH2O95865 285 aa11.48□□□□□ -0.57
SNX1-201ENST00000261889 IGHV4-34P06331 123 aa11.48□□□□□ -0.57
SNX1-201ENST00000261889 BLVRBP30043 206 aaPredicted RBP11.48□□□□□ -0.57
SNX1-201ENST00000261889 ZNF345Q14585 488 aa11.48□□□□□ -0.57
SNX1-201ENST00000261889 SGCBQ16585 318 aa11.48□□□□□ -0.57
SNX1-201ENST00000261889 EIF2S3LQ2VIR3 472 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms