RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 SRSF4Q08170 494 aaKnown RBP16.73■□□□□ 0.27
COL4A3BP-201ENST00000261415 FHL1Q13642 323 aa16.73■□□□□ 0.27
COL4A3BP-201ENST00000261415 C1orf140Q5VVS0 124 aa16.73■□□□□ 0.27
COL4A3BP-201ENST00000261415 FAAP20Q6NZ36 180 aa16.73■□□□□ 0.27
COL4A3BP-201ENST00000261415 C1QL4Q86Z23 238 aa16.73■□□□□ 0.27
COL4A3BP-201ENST00000261415 C10orf53Q8N6V4 93 aa16.73■□□□□ 0.27
COL4A3BP-201ENST00000261415 OR51A7Q8NH64 312 aa16.73■□□□□ 0.27
COL4A3BP-201ENST00000261415 CCDC107Q8WV48 283 aa16.73■□□□□ 0.27
COL4A3BP-201ENST00000261415 RAB40AQ8WXH6 277 aa16.73■□□□□ 0.27
COL4A3BP-201ENST00000261415 DNAJA3Q96EY1 480 aa16.73■□□□□ 0.27
COL4A3BP-201ENST00000261415 SMAD5Q99717 465 aaKnown RBP16.73■□□□□ 0.27
COL4A3BP-201ENST00000261415 SOX7Q9BT81 388 aa16.73■□□□□ 0.27
COL4A3BP-201ENST00000261415 RSRP1Q9BUV0 290 aa16.73■□□□□ 0.27
COL4A3BP-201ENST00000261415 MRI1Q9BV20 369 aa16.73■□□□□ 0.27
COL4A3BP-201ENST00000261415 CHST5Q9GZS9 411 aa16.73■□□□□ 0.27
COL4A3BP-201ENST00000261415 TAS2R8Q9NYW2 309 aa16.73■□□□□ 0.27
COL4A3BP-201ENST00000261415 IL20RAQ9UHF4 553 aa16.73■□□□□ 0.27
COL4A3BP-201ENST00000261415 ZIC3O60481 467 aa16.73■□□□□ 0.27
COL4A3BP-201ENST00000261415 RBBP9O75884 186 aa16.73■□□□□ 0.27
COL4A3BP-201ENST00000261415 TPT1P13693 172 aaKnown RBP16.73■□□□□ 0.27
COL4A3BP-201ENST00000261415 PTH2RP49190 550 aa16.73■□□□□ 0.27
COL4A3BP-201ENST00000261415 LTBQ06643 244 aa16.73■□□□□ 0.27
COL4A3BP-201ENST00000261415 CLEC12AQ5QGZ9 265 aa16.73■□□□□ 0.27
COL4A3BP-201ENST00000261415 LIPHQ8WWY8 451 aa16.73■□□□□ 0.27
COL4A3BP-201ENST00000261415 RELTQ969Z4 430 aa16.73■□□□□ 0.27
COL4A3BP-201ENST00000261415 MARS2Q96GW9 593 aaKnown RBP16.73■□□□□ 0.27
COL4A3BP-201ENST00000261415 SAMD8Q96LT4 415 aa16.73■□□□□ 0.27
COL4A3BP-201ENST00000261415 ZNF337Q9Y3M9 751 aa16.73■□□□□ 0.27
COL4A3BP-201ENST00000261415 DNAJC13O75165 2243 aa16.73■□□□□ 0.27
COL4A3BP-201ENST00000261415 ZNF407Q9C0G0 2248 aa16.73■□□□□ 0.27
COL4A3BP-201ENST00000261415 RNF222A6NCQ9 220 aa16.72■□□□□ 0.27
COL4A3BP-201ENST00000261415 RCBTB2O95199 551 aa16.72■□□□□ 0.27
COL4A3BP-201ENST00000261415 PMS2P2O95744 297 aa16.72■□□□□ 0.27
COL4A3BP-201ENST00000261415 SBK2P0C263 348 aa16.72■□□□□ 0.27
COL4A3BP-201ENST00000261415 CEACAM6P40199 344 aa16.72■□□□□ 0.27
COL4A3BP-201ENST00000261415 MAGEB1P43366 347 aa16.72■□□□□ 0.27
COL4A3BP-201ENST00000261415 UBE2MP61081 183 aaKnown RBP16.72■□□□□ 0.27
COL4A3BP-201ENST00000261415 RAET1LQ5VY80 246 aa16.72■□□□□ 0.27
COL4A3BP-201ENST00000261415 DRAM2Q6UX65 266 aa16.72■□□□□ 0.27
COL4A3BP-201ENST00000261415 TGIF2LXQ8IUE1 241 aa16.72■□□□□ 0.27
COL4A3BP-201ENST00000261415 GCDHQ92947 438 aaPredicted RBP16.72■□□□□ 0.27
COL4A3BP-201ENST00000261415 DDIT4LQ96D03 193 aa16.72■□□□□ 0.27
COL4A3BP-201ENST00000261415 TNFRSF13CQ96RJ3 184 aa16.72■□□□□ 0.27
COL4A3BP-201ENST00000261415 TIMP4Q99727 224 aa16.72■□□□□ 0.27
COL4A3BP-201ENST00000261415 MRPL37Q9BZE1 423 aaKnown RBP16.72■□□□□ 0.27
COL4A3BP-201ENST00000261415 TMEM231Q9H6L2 316 aa16.72■□□□□ 0.27
COL4A3BP-201ENST00000261415 SERINC1Q9NRX5 453 aa16.72■□□□□ 0.27
COL4A3BP-201ENST00000261415 H3BML4 177 aa16.72■□□□□ 0.27
COL4A3BP-201ENST00000261415 BGLAPP02818 100 aa16.72■□□□□ 0.27
COL4A3BP-201ENST00000261415 ZNF17P17021 662 aa16.72■□□□□ 0.27
COL4A3BP-201ENST00000261415 GDF1P27539 372 aa16.72■□□□□ 0.27
COL4A3BP-201ENST00000261415 CAV2P51636 162 aa16.72■□□□□ 0.27
COL4A3BP-201ENST00000261415 NAAAQ02083 359 aa16.72■□□□□ 0.27
COL4A3BP-201ENST00000261415 AKIRIN2Q53H80 203 aa16.72■□□□□ 0.27
COL4A3BP-201ENST00000261415 ZNF766Q5HY98 468 aa16.72■□□□□ 0.27
COL4A3BP-201ENST00000261415 TMEM69Q5SWH9 247 aa16.72■□□□□ 0.27
COL4A3BP-201ENST00000261415 NCMAPQ5T1S8 102 aa16.72■□□□□ 0.27
COL4A3BP-201ENST00000261415 OR2G2Q8NGZ5 317 aa16.72■□□□□ 0.27
COL4A3BP-201ENST00000261415 PGLYRP3Q96LB9 341 aa16.72■□□□□ 0.27
COL4A3BP-201ENST00000261415 ZNF703Q9H7S9 590 aaPredicted RBP16.72■□□□□ 0.27
COL4A3BP-201ENST00000261415 KLRC4-KLRK1H3BQV0 150 aa16.71■□□□□ 0.27
COL4A3BP-201ENST00000261415 K7ENP7 123 aa16.71■□□□□ 0.27
COL4A3BP-201ENST00000261415 AHSA1O95433 338 aa16.71■□□□□ 0.27
COL4A3BP-201ENST00000261415 SFTA3P0C7M3 94 aa16.71■□□□□ 0.27
COL4A3BP-201ENST00000261415 ASAH2BP0C7U1 165 aa16.71■□□□□ 0.27
COL4A3BP-201ENST00000261415 BMP7P18075 431 aa16.71■□□□□ 0.27
COL4A3BP-201ENST00000261415 ACKR3P25106 362 aa16.71■□□□□ 0.27
COL4A3BP-201ENST00000261415 MEOX1P50221 254 aa16.71■□□□□ 0.27
COL4A3BP-201ENST00000261415 RPS4XP62701 263 aaKnown RBP16.71■□□□□ 0.27
COL4A3BP-201ENST00000261415 INO80CQ6PI98 192 aaPredicted RBP16.71■□□□□ 0.27
COL4A3BP-201ENST00000261415 THSD4Q6ZMP0 1018 aa16.71■□□□□ 0.27
COL4A3BP-201ENST00000261415 TMEM178AQ8NBL3 297 aa16.71■□□□□ 0.27
COL4A3BP-201ENST00000261415 OR52L1Q8NGH7 329 aa16.71■□□□□ 0.27
COL4A3BP-201ENST00000261415 MISP3Q96FF7 219 aa16.71■□□□□ 0.27
COL4A3BP-201ENST00000261415 TTTY12Q9BZ98 90 aa16.71■□□□□ 0.27
COL4A3BP-201ENST00000261415 FKRPQ9H9S5 495 aa16.71■□□□□ 0.27
COL4A3BP-201ENST00000261415 RHOFQ9HBH0 211 aa16.71■□□□□ 0.27
COL4A3BP-201ENST00000261415 RPS10P5Q9NQ39 176 aa16.71■□□□□ 0.27
COL4A3BP-201ENST00000261415 RAXQ9Y2V3 346 aa16.71■□□□□ 0.27
COL4A3BP-201ENST00000261415 CD74P04233 296 aa16.71■□□□□ 0.27
COL4A3BP-201ENST00000261415 PPA1Q15181 289 aa16.71■□□□□ 0.27
COL4A3BP-201ENST00000261415 GXYLT1Q4G148 440 aa16.71■□□□□ 0.27
COL4A3BP-201ENST00000261415 DMKNQ6E0U4 476 aaPredicted RBP16.71■□□□□ 0.27
COL4A3BP-201ENST00000261415 INO80EQ8NBZ0 244 aaPredicted RBP16.71■□□□□ 0.27
COL4A3BP-201ENST00000261415 SLC30A7Q8NEW0 376 aa16.71■□□□□ 0.27
COL4A3BP-201ENST00000261415 B4GALT7Q9UBV7 327 aa16.71■□□□□ 0.27
COL4A3BP-201ENST00000261415 KCNIP3Q9Y2W7 256 aa16.71■□□□□ 0.27
COL4A3BP-201ENST00000261415 MFNGO00587 321 aa16.7■□□□□ 0.26
COL4A3BP-201ENST00000261415 MT-ATP6P00846 226 aa16.7■□□□□ 0.26
COL4A3BP-201ENST00000261415 NUTF2P61970 127 aaKnown RBP16.7■□□□□ 0.26
COL4A3BP-201ENST00000261415 LY6G6FQ5SQ64 297 aa16.7■□□□□ 0.26
COL4A3BP-201ENST00000261415 LRRC69Q6ZNQ3 347 aa16.7■□□□□ 0.26
COL4A3BP-201ENST00000261415 YRDCQ86U90 279 aaKnown RBP16.7■□□□□ 0.26
COL4A3BP-201ENST00000261415 BBS1Q8NFJ9 593 aa16.7■□□□□ 0.26
COL4A3BP-201ENST00000261415 OR14L1PQ8NHC6 308 aa16.7■□□□□ 0.26
COL4A3BP-201ENST00000261415 SLC25A43Q8WUT9 341 aaPredicted RBP16.7■□□□□ 0.26
COL4A3BP-201ENST00000261415 SLC25A36Q96CQ1 311 aa16.7■□□□□ 0.26
COL4A3BP-201ENST00000261415 PIGQQ9BRB3 760 aa16.7■□□□□ 0.26
COL4A3BP-201ENST00000261415 C1orf198Q9H425 327 aa16.7■□□□□ 0.26
COL4A3BP-201ENST00000261415 FOXJ3Q9UPW0 622 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms