RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 WDSUB1Q8N9V3 476 aa13.43□□□□□ -0.26
DDX56-201ENST00000258772 RRNAD1Q96FB5 475 aaKnown RBP13.43□□□□□ -0.26
DDX56-201ENST00000258772 NARS2Q96I59 477 aaKnown RBP13.43□□□□□ -0.26
DDX56-201ENST00000258772 CRB3Q9BUF7 120 aa13.43□□□□□ -0.26
DDX56-201ENST00000258772 RARRES3Q9UL19 164 aa13.43□□□□□ -0.26
DDX56-201ENST00000258772 RAB19A4D1S5 217 aa13.42□□□□□ -0.26
DDX56-201ENST00000258772 AQP7P3A6NL99 342 aa13.42□□□□□ -0.26
DDX56-201ENST00000258772 MPTX1A8MV57 137 aa13.42□□□□□ -0.26
DDX56-201ENST00000258772 ARFRP1Q13795 201 aa13.42□□□□□ -0.26
DDX56-201ENST00000258772 SLC9A3R2Q15599 337 aa13.42□□□□□ -0.26
DDX56-201ENST00000258772 SGCAQ16586 387 aa13.42□□□□□ -0.26
DDX56-201ENST00000258772 DMRTC1Q5HYR2 192 aa13.42□□□□□ -0.26
DDX56-201ENST00000258772 LCN10Q6JVE6 187 aa13.42□□□□□ -0.26
DDX56-201ENST00000258772 TMPPEQ6ZT21 453 aa13.42□□□□□ -0.26
DDX56-201ENST00000258772 FAM89BQ8N5H3 189 aa13.42□□□□□ -0.26
DDX56-201ENST00000258772 OR5H2Q8NGV7 314 aa13.42□□□□□ -0.26
DDX56-201ENST00000258772 SLC25A43Q8WUT9 341 aaPredicted RBP13.42□□□□□ -0.26
DDX56-201ENST00000258772 SPACA9Q96E40 222 aaPredicted RBP13.42□□□□□ -0.26
DDX56-201ENST00000258772 RASL10BQ96S79 203 aa13.42□□□□□ -0.26
DDX56-201ENST00000258772 CDC6Q99741 560 aa13.42□□□□□ -0.26
DDX56-201ENST00000258772 OR10A2Q9H208 303 aa13.42□□□□□ -0.26
DDX56-201ENST00000258772 HDGFL3Q9Y3E1 203 aa13.42□□□□□ -0.26
DDX56-201ENST00000258772 FLVCR1Q9Y5Y0 555 aa13.42□□□□□ -0.26
DDX56-201ENST00000258772 A0A0B4J2A0 478 aa13.42□□□□□ -0.26
DDX56-201ENST00000258772 LOC102725191A0A1B0GVB3 256 aa13.42□□□□□ -0.26
DDX56-201ENST00000258772 C5orf63A6NC05 138 aa13.42□□□□□ -0.26
DDX56-201ENST00000258772 ADAP1O75689 374 aa13.42□□□□□ -0.26
DDX56-201ENST00000258772 TSPAN9O75954 239 aa13.42□□□□□ -0.26
DDX56-201ENST00000258772 DKK1O94907 266 aa13.42□□□□□ -0.26
DDX56-201ENST00000258772 PI3P19957 117 aa13.42□□□□□ -0.26
DDX56-201ENST00000258772 FPR2P25090 351 aa13.42□□□□□ -0.26
DDX56-201ENST00000258772 CBX5P45973 191 aa13.42□□□□□ -0.26
DDX56-201ENST00000258772 SUPT4H1P63272 117 aaKnown RBP13.42□□□□□ -0.26
DDX56-201ENST00000258772 NAAAQ02083 359 aa13.42□□□□□ -0.26
DDX56-201ENST00000258772 PEG10Q86TG7 708 aaKnown RBP13.42□□□□□ -0.26
DDX56-201ENST00000258772 GTPBP8Q8N3Z3 284 aaPredicted RBP13.42□□□□□ -0.26
DDX56-201ENST00000258772 ZSCAN4Q8NAM6 433 aaPredicted RBP13.42□□□□□ -0.26
DDX56-201ENST00000258772 SLC30A7Q8NEW0 376 aa13.42□□□□□ -0.26
DDX56-201ENST00000258772 ROBO4Q8WZ75 1007 aa13.42□□□□□ -0.26
DDX56-201ENST00000258772 SCGB3A2Q96PL1 93 aa13.42□□□□□ -0.26
DDX56-201ENST00000258772 RTBDNQ9BSG5 229 aaPredicted RBP13.42□□□□□ -0.26
DDX56-201ENST00000258772 ZNF416Q9BWM5 594 aa13.42□□□□□ -0.26
DDX56-201ENST00000258772 DEFB126Q9BYW3 111 aa13.42□□□□□ -0.26
DDX56-201ENST00000258772 RAB18Q9NP72 206 aa13.42□□□□□ -0.26
DDX56-201ENST00000258772 SHPKQ9UHJ6 478 aa13.42□□□□□ -0.26
DDX56-201ENST00000258772 A0A1W2PQM1 296 aa13.41□□□□□ -0.26
DDX56-201ENST00000258772 TLX3O43711 291 aaPredicted RBP13.41□□□□□ -0.26
DDX56-201ENST00000258772 TPT1P13693 172 aaKnown RBP13.41□□□□□ -0.26
DDX56-201ENST00000258772 PRF1P14222 555 aa13.41□□□□□ -0.26
DDX56-201ENST00000258772 AMY2BP19961 511 aa13.41□□□□□ -0.26
DDX56-201ENST00000258772 CTSSP25774 331 aa13.41□□□□□ -0.26
DDX56-201ENST00000258772 ADH6P28332 368 aa13.41□□□□□ -0.26
DDX56-201ENST00000258772 EIF1P41567 113 aaKnown RBP13.41□□□□□ -0.26
DDX56-201ENST00000258772 DHPSP49366 369 aaPredicted RBP13.41□□□□□ -0.26
DDX56-201ENST00000258772 CLDN17P56750 224 aa13.41□□□□□ -0.26
DDX56-201ENST00000258772 ECH1Q13011 328 aa13.41□□□□□ -0.26
DDX56-201ENST00000258772 KISS1Q15726 138 aa13.41□□□□□ -0.26
DDX56-201ENST00000258772 CRIP3Q6Q6R5 217 aa13.41□□□□□ -0.26
DDX56-201ENST00000258772 C1QL2Q7Z5L3 287 aa13.41□□□□□ -0.26
DDX56-201ENST00000258772 LHFPL1Q86WI0 220 aa13.41□□□□□ -0.26
DDX56-201ENST00000258772 BAP18Q8IXM2 172 aa13.41□□□□□ -0.26
DDX56-201ENST00000258772 FADS6Q8N9I5 356 aa13.41□□□□□ -0.26
DDX56-201ENST00000258772 OR51T1Q8NGJ9 327 aa13.41□□□□□ -0.26
DDX56-201ENST00000258772 ST6GALNAC5Q9BVH7 336 aa13.41□□□□□ -0.26
DDX56-201ENST00000258772 NKX6-2Q9C056 277 aaPredicted RBP13.41□□□□□ -0.26
DDX56-201ENST00000258772 CYTL1Q9NRR1 136 aa13.41□□□□□ -0.26
DDX56-201ENST00000258772 ASF1BQ9NVP2 202 aa13.41□□□□□ -0.26
DDX56-201ENST00000258772 FAM74A7A6NL05 159 aa13.41□□□□□ -0.26
DDX56-201ENST00000258772 ONECUT2O95948 504 aa13.41□□□□□ -0.26
DDX56-201ENST00000258772 PLATP00750 562 aa13.41□□□□□ -0.26
DDX56-201ENST00000258772 FKBP2P26885 142 aaKnown RBP13.41□□□□□ -0.26
DDX56-201ENST00000258772 PI4KAP42356 2102 aa13.41□□□□□ -0.26
DDX56-201ENST00000258772 SLC35A1P78382 337 aa13.41□□□□□ -0.26
DDX56-201ENST00000258772 FAM74A3Q4VXF1 159 aa13.41□□□□□ -0.26
DDX56-201ENST00000258772 AADACL3Q5VUY0 350 aa13.41□□□□□ -0.26
DDX56-201ENST00000258772 GUSBP11Q6P575 273 aa13.41□□□□□ -0.26
DDX56-201ENST00000258772 PNLDC1Q8NA58 520 aaKnown RBP13.41□□□□□ -0.26
DDX56-201ENST00000258772 OR5D18Q8NGL1 313 aa13.41□□□□□ -0.26
DDX56-201ENST00000258772 OR13G1Q8NGZ3 307 aa13.41□□□□□ -0.26
DDX56-201ENST00000258772 PGAM5Q96HS1 289 aa13.41□□□□□ -0.26
DDX56-201ENST00000258772 LYZL4Q96KX0 146 aa13.41□□□□□ -0.26
DDX56-201ENST00000258772 PRR13Q9NZ81 148 aa13.41□□□□□ -0.26
DDX56-201ENST00000258772 IGLV3-1P01715 115 aa13.4□□□□□ -0.26
DDX56-201ENST00000258772 PNLIPP16233 465 aa13.4□□□□□ -0.26
DDX56-201ENST00000258772 PTGFRP43088 359 aa13.4□□□□□ -0.26
DDX56-201ENST00000258772 OR3A2P47893 321 aa13.4□□□□□ -0.26
DDX56-201ENST00000258772 LSM6P62312 80 aaKnown RBP13.4□□□□□ -0.26
DDX56-201ENST00000258772 ZNF169Q14929 603 aaPredicted RBP13.4□□□□□ -0.26
DDX56-201ENST00000258772 ANKRD55Q3KP44 614 aa13.4□□□□□ -0.26
DDX56-201ENST00000258772 PRAMEF20Q5VT98 475 aa13.4□□□□□ -0.26
DDX56-201ENST00000258772 SPEM1Q8N4L4 309 aa13.4□□□□□ -0.26
DDX56-201ENST00000258772 LIN37Q96GY3 246 aaPredicted RBP13.4□□□□□ -0.26
DDX56-201ENST00000258772 MICU1Q9BPX6 476 aa13.4□□□□□ -0.26
DDX56-201ENST00000258772 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.4□□□□□ -0.26
DDX56-201ENST00000258772 TMEM100Q9NV29 134 aa13.4□□□□□ -0.26
DDX56-201ENST00000258772 C19orf25Q9UFG5 118 aaPredicted RBP13.4□□□□□ -0.26
DDX56-201ENST00000258772 OSGIN2Q9Y236 505 aa13.4□□□□□ -0.26
DDX56-201ENST00000258772 CHCHD2Q9Y6H1 151 aaPredicted RBP13.4□□□□□ -0.26
DDX56-201ENST00000258772 IGHV5-10-1A0A0J9YXX1 117 aa13.4□□□□□ -0.26
DDX56-201ENST00000258772 TMEM218A2RU14 115 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms