RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 WNT2BQ93097 391 aa16.44■□□□□ 0.22
TRIM47-201ENST00000254816 MRI1Q9BV20 369 aa16.44■□□□□ 0.22
TRIM47-201ENST00000254816 HRASLSQ9HDD0 168 aa16.44■□□□□ 0.22
TRIM47-201ENST00000254816 HSPB11Q9Y547 144 aa16.44■□□□□ 0.22
TRIM47-201ENST00000254816 LOC100509620A0A075B734 347 aa16.43■□□□□ 0.22
TRIM47-201ENST00000254816 MEGF11A6BM72 1044 aa16.43■□□□□ 0.22
TRIM47-201ENST00000254816 TMEM127O75204 238 aa16.43■□□□□ 0.22
TRIM47-201ENST00000254816 KIR2DL2P43627 348 aaPredicted RBP16.43■□□□□ 0.22
TRIM47-201ENST00000254816 ART1P52961 327 aa16.43■□□□□ 0.22
TRIM47-201ENST00000254816 RAB1AP62820 205 aa16.43■□□□□ 0.22
TRIM47-201ENST00000254816 DYRK1AQ13627 763 aa16.43■□□□□ 0.22
TRIM47-201ENST00000254816 ST3GAL2Q16842 350 aa16.43■□□□□ 0.22
TRIM47-201ENST00000254816 GSG1Q2KHT4 349 aa16.43■□□□□ 0.22
TRIM47-201ENST00000254816 BTN2A1Q7KYR7 527 aa16.43■□□□□ 0.22
TRIM47-201ENST00000254816 LYPD6Q86Y78 171 aa16.43■□□□□ 0.22
TRIM47-201ENST00000254816 OR52H1Q8NGJ2 320 aa16.43■□□□□ 0.22
TRIM47-201ENST00000254816 DEDD2Q8WXF8 326 aa16.43■□□□□ 0.22
TRIM47-201ENST00000254816 C20orf85Q9H1P6 137 aa16.43■□□□□ 0.22
TRIM47-201ENST00000254816 TMEM138Q9NPI0 162 aa16.43■□□□□ 0.22
TRIM47-201ENST00000254816 B3GNT2Q9NY97 397 aa16.43■□□□□ 0.22
TRIM47-201ENST00000254816 COPZ2Q9P299 210 aa16.43■□□□□ 0.22
TRIM47-201ENST00000254816 ETV7Q9Y603 341 aa16.43■□□□□ 0.22
TRIM47-201ENST00000254816 V9GYS6 101 aa16.43■□□□□ 0.22
TRIM47-201ENST00000254816 GABARAPH6UMI1 98 aa16.43■□□□□ 0.22
TRIM47-201ENST00000254816 DHRS3O75911 302 aa16.43■□□□□ 0.22
TRIM47-201ENST00000254816 TPOP07202 933 aa16.43■□□□□ 0.22
TRIM47-201ENST00000254816 FAHP16930 419 aa16.43■□□□□ 0.22
TRIM47-201ENST00000254816 CFPP27918 469 aa16.43■□□□□ 0.22
TRIM47-201ENST00000254816 TMPRSS3P57727 454 aa16.43■□□□□ 0.22
TRIM47-201ENST00000254816 CXADRP78310 365 aa16.43■□□□□ 0.22
TRIM47-201ENST00000254816 ZNF529Q6P280 563 aa16.43■□□□□ 0.22
TRIM47-201ENST00000254816 FCAMRQ8WWV6 532 aa16.43■□□□□ 0.22
TRIM47-201ENST00000254816 REEP6Q96HR9 211 aa16.43■□□□□ 0.22
TRIM47-201ENST00000254816 C7orf50Q9BRJ6 194 aaKnown RBP16.43■□□□□ 0.22
TRIM47-201ENST00000254816 CNTD2Q9H8S5 307 aa16.43■□□□□ 0.22
TRIM47-201ENST00000254816 PIGLQ9Y2B2 252 aa16.43■□□□□ 0.22
TRIM47-201ENST00000254816 RHBDD3Q9Y3P4 386 aa16.43■□□□□ 0.22
TRIM47-201ENST00000254816 DSPP15924 2871 aaKnown RBP16.42■□□□□ 0.22
TRIM47-201ENST00000254816 TMEM272A0A1B0GTI8 110 aa16.42■□□□□ 0.22
TRIM47-201ENST00000254816 SULT1B1O43704 296 aa16.42■□□□□ 0.22
TRIM47-201ENST00000254816 ZNF780AO75290 641 aaPredicted RBP16.42■□□□□ 0.22
TRIM47-201ENST00000254816 CD37P11049 281 aa16.42■□□□□ 0.22
TRIM47-201ENST00000254816 IGHV1-2P23083 117 aa16.42■□□□□ 0.22
TRIM47-201ENST00000254816 FAM180AQ6UWF9 173 aa16.42■□□□□ 0.22
TRIM47-201ENST00000254816 SEM1Q6ZVN7 128 aa16.42■□□□□ 0.22
TRIM47-201ENST00000254816 BIVMQ86UB2 503 aa16.42■□□□□ 0.22
TRIM47-201ENST00000254816 OR5AS1Q8N127 324 aa16.42■□□□□ 0.22
TRIM47-201ENST00000254816 NKAIN3Q8N8D7 197 aa16.42■□□□□ 0.22
TRIM47-201ENST00000254816 BCL2L2Q92843 193 aaPredicted RBP16.42■□□□□ 0.22
TRIM47-201ENST00000254816 HAVCR1Q96D42 359 aa16.42■□□□□ 0.22
TRIM47-201ENST00000254816 IGF2RP11717 2491 aa16.42■□□□□ 0.22
TRIM47-201ENST00000254816 LOC390937A0A1W2PQ73 354 aa16.42■□□□□ 0.22
TRIM47-201ENST00000254816 FAM87AP0C7U9 286 aa16.42■□□□□ 0.22
TRIM47-201ENST00000254816 TAS2R20P59543 309 aa16.42■□□□□ 0.22
TRIM47-201ENST00000254816 OR10K2Q6IF99 312 aa16.42■□□□□ 0.22
TRIM47-201ENST00000254816 ANKRD16Q6P6B7 361 aa16.42■□□□□ 0.22
TRIM47-201ENST00000254816 RPRMLQ8N4K4 120 aa16.42■□□□□ 0.22
TRIM47-201ENST00000254816 Q8NA96 180 aa16.42■□□□□ 0.22
TRIM47-201ENST00000254816 OR6M1Q8NGM8 313 aa16.42■□□□□ 0.22
TRIM47-201ENST00000254816 GAL3ST1Q99999 423 aa16.42■□□□□ 0.22
TRIM47-201ENST00000254816 IGKV1-9A0A0C4DH69 117 aa16.41■□□□□ 0.22
TRIM47-201ENST00000254816 LOC100289279A0A1B0GTE1 492 aa16.41■□□□□ 0.22
TRIM47-201ENST00000254816 A0A1W2PR80 420 aa16.41■□□□□ 0.22
TRIM47-201ENST00000254816 RAD51DO75771 328 aa16.41■□□□□ 0.22
TRIM47-201ENST00000254816 LYZL6O75951 148 aa16.41■□□□□ 0.22
TRIM47-201ENST00000254816 TSC22D1Q15714 1073 aa16.41■□□□□ 0.22
TRIM47-201ENST00000254816 NSUN5P2Q63ZY6 315 aa16.41■□□□□ 0.22
TRIM47-201ENST00000254816 RTL6Q6ICC9 239 aa16.41■□□□□ 0.22
TRIM47-201ENST00000254816 C3P1Q6ZMU1 363 aa16.41■□□□□ 0.22
TRIM47-201ENST00000254816 ZNF584Q8IVC4 421 aa16.41■□□□□ 0.22
TRIM47-201ENST00000254816 NPRL2Q8WTW4 380 aa16.41■□□□□ 0.22
TRIM47-201ENST00000254816 RAB40AQ8WXH6 277 aa16.41■□□□□ 0.22
TRIM47-201ENST00000254816 C5orf49A4QMS7 147 aa16.4■□□□□ 0.22
TRIM47-201ENST00000254816 EDN3P14138 238 aa16.4■□□□□ 0.22
TRIM47-201ENST00000254816 ACKR3P25106 362 aa16.4■□□□□ 0.22
TRIM47-201ENST00000254816 C1orf100Q5SVJ3 147 aa16.4■□□□□ 0.22
TRIM47-201ENST00000254816 PGAP1Q75T13 922 aa16.4■□□□□ 0.22
TRIM47-201ENST00000254816 CD163Q86VB7 1156 aa16.4■□□□□ 0.22
TRIM47-201ENST00000254816 CISD2Q8N5K1 135 aaKnown RBP16.4■□□□□ 0.22
TRIM47-201ENST00000254816 SORCS2Q96PQ0 1159 aa16.4■□□□□ 0.22
TRIM47-201ENST00000254816 OR10A4Q9H209 315 aa16.4■□□□□ 0.22
TRIM47-201ENST00000254816 HPXP02790 462 aa16.4■□□□□ 0.22
TRIM47-201ENST00000254816 HCKP08631 526 aa16.4■□□□□ 0.22
TRIM47-201ENST00000254816 PER3P56645 1201 aa16.4■□□□□ 0.22
TRIM47-201ENST00000254816 ZNF92Q03936 586 aa16.4■□□□□ 0.22
TRIM47-201ENST00000254816 CD276Q5ZPR3 534 aa16.4■□□□□ 0.22
TRIM47-201ENST00000254816 C9orf62Q8N4C0 152 aa16.4■□□□□ 0.22
TRIM47-201ENST00000254816 OR56B4Q8NH76 319 aa16.4■□□□□ 0.22
TRIM47-201ENST00000254816 GON7Q9BXV9 100 aa16.4■□□□□ 0.22
TRIM47-201ENST00000254816 SSNA1O43805 119 aa16.39■□□□□ 0.21
TRIM47-201ENST00000254816 TSC22D2O75157 780 aa16.39■□□□□ 0.21
TRIM47-201ENST00000254816 ZNF93P35789 620 aaPredicted RBP16.39■□□□□ 0.21
TRIM47-201ENST00000254816 ARR3P36575 388 aa16.39■□□□□ 0.21
TRIM47-201ENST00000254816 VEGFCP49767 419 aa16.39■□□□□ 0.21
TRIM47-201ENST00000254816 UBE2V2Q15819 145 aa16.39■□□□□ 0.21
TRIM47-201ENST00000254816 FOXRED1Q96CU9 486 aaPredicted RBP16.39■□□□□ 0.21
TRIM47-201ENST00000254816 METTL17Q9H7H0 456 aaPredicted RBP16.39■□□□□ 0.21
TRIM47-201ENST00000254816 MTRF1O75570 445 aaKnown RBP16.39■□□□□ 0.21
TRIM47-201ENST00000254816 TOXO94900 526 aa16.39■□□□□ 0.21
TRIM47-201ENST00000254816 KDM4BO94953 1096 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms