RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 HIST2H3AQ71DI3 136 aa17.15■□□□□ 0.34
CDC42EP1-201ENST00000249014 MARCH1Q8TCQ1 289 aa17.15■□□□□ 0.34
CDC42EP1-201ENST00000249014 C17orf50Q8WW18 174 aa17.15■□□□□ 0.34
CDC42EP1-201ENST00000249014 ZNF775Q96BV0 537 aaPredicted RBP17.15■□□□□ 0.34
CDC42EP1-201ENST00000249014 NAA11Q9BSU3 229 aaPredicted RBP17.15■□□□□ 0.34
CDC42EP1-201ENST00000249014 SDHAF2Q9NX18 166 aa17.15■□□□□ 0.34
CDC42EP1-201ENST00000249014 MFSD2BA6NFX1 497 aa17.15■□□□□ 0.34
CDC42EP1-201ENST00000249014 MFNGO00587 321 aa17.15■□□□□ 0.34
CDC42EP1-201ENST00000249014 LAMTOR5O43504 91 aa17.15■□□□□ 0.34
CDC42EP1-201ENST00000249014 CBR3O75828 277 aa17.15■□□□□ 0.34
CDC42EP1-201ENST00000249014 CER1O95813 267 aa17.15■□□□□ 0.34
CDC42EP1-201ENST00000249014 PRF1P14222 555 aa17.15■□□□□ 0.34
CDC42EP1-201ENST00000249014 HLA-GP17693 338 aa17.15■□□□□ 0.34
CDC42EP1-201ENST00000249014 NAT1P18440 290 aa17.15■□□□□ 0.34
CDC42EP1-201ENST00000249014 RPS18P62269 152 aaKnown RBP17.15■□□□□ 0.34
CDC42EP1-201ENST00000249014 FGL1Q08830 312 aa17.15■□□□□ 0.34
CDC42EP1-201ENST00000249014 ECH1Q13011 328 aa17.15■□□□□ 0.34
CDC42EP1-201ENST00000249014 UBE2V2Q15819 145 aa17.15■□□□□ 0.34
CDC42EP1-201ENST00000249014 TMEM65Q6PI78 240 aa17.15■□□□□ 0.34
CDC42EP1-201ENST00000249014 HOGA1Q86XE5 327 aa17.15■□□□□ 0.34
CDC42EP1-201ENST00000249014 CASTOR1Q8WTX7 329 aa17.15■□□□□ 0.34
CDC42EP1-201ENST00000249014 V9GYS6 101 aa17.15■□□□□ 0.34
CDC42EP1-201ENST00000249014 A0A0U1RQV5 110 aa17.14■□□□□ 0.33
CDC42EP1-201ENST00000249014 DHRS3O75911 302 aa17.14■□□□□ 0.33
CDC42EP1-201ENST00000249014 RLN2P04090 185 aa17.14■□□□□ 0.33
CDC42EP1-201ENST00000249014 FAHP16930 419 aa17.14■□□□□ 0.33
CDC42EP1-201ENST00000249014 VAMP1P23763 118 aa17.14■□□□□ 0.33
CDC42EP1-201ENST00000249014 OTX1P32242 354 aaPredicted RBP17.14■□□□□ 0.33
CDC42EP1-201ENST00000249014 C11orf87Q6NUJ2 197 aa17.14■□□□□ 0.33
CDC42EP1-201ENST00000249014 FAHD2BQ6P2I3 314 aaPredicted RBP17.14■□□□□ 0.33
CDC42EP1-201ENST00000249014 SLC51BQ86UW2 128 aa17.14■□□□□ 0.33
CDC42EP1-201ENST00000249014 PPP1R1CQ8WVI7 109 aa17.14■□□□□ 0.33
CDC42EP1-201ENST00000249014 SLC39A7Q92504 469 aa17.14■□□□□ 0.33
CDC42EP1-201ENST00000249014 FBXW5Q969U6 566 aa17.14■□□□□ 0.33
CDC42EP1-201ENST00000249014 FBXO17Q96EF6 278 aa17.14■□□□□ 0.33
CDC42EP1-201ENST00000249014 FAHD2AQ96GK7 314 aa17.14■□□□□ 0.33
CDC42EP1-201ENST00000249014 ZC3H10Q96K80 434 aaKnown RBP17.14■□□□□ 0.33
CDC42EP1-201ENST00000249014 KCNMB2Q9Y691 235 aa17.14■□□□□ 0.33
CDC42EP1-201ENST00000249014 AGTR1P30556 359 aa17.13■□□□□ 0.33
CDC42EP1-201ENST00000249014 PTGFRP43088 359 aa17.13■□□□□ 0.33
CDC42EP1-201ENST00000249014 SUCLG1P53597 346 aaKnown RBP17.13■□□□□ 0.33
CDC42EP1-201ENST00000249014 ATP1B3P54709 279 aa17.13■□□□□ 0.33
CDC42EP1-201ENST00000249014 B3GALT5-AS1P59052 145 aa17.13■□□□□ 0.33
CDC42EP1-201ENST00000249014 ARMC10Q8N2F6 343 aa17.13■□□□□ 0.33
CDC42EP1-201ENST00000249014 OR56B1Q8NGI3 324 aa17.13■□□□□ 0.33
CDC42EP1-201ENST00000249014 GUCD1Q96NT3 240 aa17.13■□□□□ 0.33
CDC42EP1-201ENST00000249014 PHB2Q99623 299 aa17.13■□□□□ 0.33
CDC42EP1-201ENST00000249014 PIGQQ9BRB3 760 aa17.13■□□□□ 0.33
CDC42EP1-201ENST00000249014 ULBP2Q9BZM5 246 aa17.13■□□□□ 0.33
CDC42EP1-201ENST00000249014 WDR13Q9H1Z4 485 aa17.13■□□□□ 0.33
CDC42EP1-201ENST00000249014 TNFSF18Q9UNG2 199 aa17.13■□□□□ 0.33
CDC42EP1-201ENST00000249014 COL27A1Q8IZC6 1860 aaPredicted RBP17.13■□□□□ 0.33
CDC42EP1-201ENST00000249014 STMND1H3BQB6 276 aa17.13■□□□□ 0.33
CDC42EP1-201ENST00000249014 UBBP0CG47 229 aa17.13■□□□□ 0.33
CDC42EP1-201ENST00000249014 NTF4P34130 210 aa17.13■□□□□ 0.33
CDC42EP1-201ENST00000249014 RPS27AP62979 156 aaKnown RBP17.13■□□□□ 0.33
CDC42EP1-201ENST00000249014 Q0VFX4 171 aa17.13■□□□□ 0.33
CDC42EP1-201ENST00000249014 FAM89BQ8N5H3 189 aa17.13■□□□□ 0.33
CDC42EP1-201ENST00000249014 OR5M9Q8NGP3 310 aa17.13■□□□□ 0.33
CDC42EP1-201ENST00000249014 DHRS9Q9BPW9 319 aa17.13■□□□□ 0.33
CDC42EP1-201ENST00000249014 OR10A2Q9H208 303 aa17.13■□□□□ 0.33
CDC42EP1-201ENST00000249014 SMOC1Q9H4F8 434 aa17.13■□□□□ 0.33
CDC42EP1-201ENST00000249014 MED9Q9NWA0 146 aa17.13■□□□□ 0.33
CDC42EP1-201ENST00000249014 FAM25EA8MYX2 175 aa17.12■□□□□ 0.33
CDC42EP1-201ENST00000249014 SLC25A4P12235 298 aa17.12■□□□□ 0.33
CDC42EP1-201ENST00000249014 THBS4P35443 961 aa17.12■□□□□ 0.33
CDC42EP1-201ENST00000249014 ARPC4P59998 168 aa17.12■□□□□ 0.33
CDC42EP1-201ENST00000249014 KCTD9Q7L273 389 aa17.12■□□□□ 0.33
CDC42EP1-201ENST00000249014 YRDCQ86U90 279 aaKnown RBP17.12■□□□□ 0.33
CDC42EP1-201ENST00000249014 C20orf196Q8IYI0 205 aa17.12■□□□□ 0.33
CDC42EP1-201ENST00000249014 PNLDC1Q8NA58 520 aaKnown RBP17.12■□□□□ 0.33
CDC42EP1-201ENST00000249014 OR10K1Q8NGX5 313 aa17.12■□□□□ 0.33
CDC42EP1-201ENST00000249014 TERB2Q8NHR7 220 aa17.12■□□□□ 0.33
CDC42EP1-201ENST00000249014 OCSTAMPQ9BR26 566 aa17.12■□□□□ 0.33
CDC42EP1-201ENST00000249014 URM1Q9BTM9 101 aaKnown RBP17.12■□□□□ 0.33
CDC42EP1-201ENST00000249014 PLEK2Q9NYT0 353 aa17.12■□□□□ 0.33
CDC42EP1-201ENST00000249014 COMMD9Q9P000 198 aa17.12■□□□□ 0.33
CDC42EP1-201ENST00000249014 NUP50Q9UKX7 468 aa17.12■□□□□ 0.33
CDC42EP1-201ENST00000249014 FOXI3A8MTJ6 420 aaPredicted RBP17.12■□□□□ 0.33
CDC42EP1-201ENST00000249014 TEX46H3BTG2 121 aa17.12■□□□□ 0.33
CDC42EP1-201ENST00000249014 M0R135 149 aa17.12■□□□□ 0.33
CDC42EP1-201ENST00000249014 NAT2P11245 290 aa17.12■□□□□ 0.33
CDC42EP1-201ENST00000249014 PNLIPRP3Q17RR3 467 aa17.12■□□□□ 0.33
CDC42EP1-201ENST00000249014 SNAI3Q3KNW1 292 aa17.12■□□□□ 0.33
CDC42EP1-201ENST00000249014 VAX1Q5SQQ9 334 aa17.12■□□□□ 0.33
CDC42EP1-201ENST00000249014 JMJD6Q6NYC1 403 aaPredicted RBP17.12■□□□□ 0.33
CDC42EP1-201ENST00000249014 PPP1R32Q7Z5V6 425 aa17.12■□□□□ 0.33
CDC42EP1-201ENST00000249014 OR51T1Q8NGJ9 327 aa17.12■□□□□ 0.33
CDC42EP1-201ENST00000249014 OR1S1Q8NH92 325 aa17.12■□□□□ 0.33
CDC42EP1-201ENST00000249014 ZNF799Q96GE5 643 aa17.12■□□□□ 0.33
CDC42EP1-201ENST00000249014 PIGLQ9Y2B2 252 aa17.12■□□□□ 0.33
CDC42EP1-201ENST00000249014 DUS4LO95620 317 aaKnown RBP17.11■□□□□ 0.33
CDC42EP1-201ENST00000249014 MGMTP16455 207 aa17.11■□□□□ 0.33
CDC42EP1-201ENST00000249014 ALDH3B1P43353 468 aa17.11■□□□□ 0.33
CDC42EP1-201ENST00000249014 Q6ZSR3 168 aa17.11■□□□□ 0.33
CDC42EP1-201ENST00000249014 KCNRGQ8N5I3 272 aa17.11■□□□□ 0.33
CDC42EP1-201ENST00000249014 CHST5Q9GZS9 411 aa17.11■□□□□ 0.33
CDC42EP1-201ENST00000249014 A0A0D9SG52 128 aa17.11■□□□□ 0.33
CDC42EP1-201ENST00000249014 RNF222A6NCQ9 220 aa17.11■□□□□ 0.33
CDC42EP1-201ENST00000249014 DBX1A6NMT0 343 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms