RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 H3BNC9 293 aa12.52□□□□□ -0.4
TARDBP-201ENST00000240185 SLC17A2O00624 439 aa12.52□□□□□ -0.4
TARDBP-201ENST00000240185 NAT2P11245 290 aa12.52□□□□□ -0.4
TARDBP-201ENST00000240185 CEBPBP17676 345 aa12.52□□□□□ -0.4
TARDBP-201ENST00000240185 GLRA1P23415 457 aa12.52□□□□□ -0.4
TARDBP-201ENST00000240185 SULT1A1P50225 295 aa12.52□□□□□ -0.4
TARDBP-201ENST00000240185 MRM1Q6IN84 353 aaKnown RBP12.52□□□□□ -0.4
TARDBP-201ENST00000240185 SLC25A26Q70HW3 274 aa12.52□□□□□ -0.4
TARDBP-201ENST00000240185 DND1Q8IYX4 353 aaKnown RBP12.52□□□□□ -0.4
TARDBP-201ENST00000240185 OR2T10Q8NGZ9 312 aa12.52□□□□□ -0.4
TARDBP-201ENST00000240185 STARD4Q96DR4 205 aa12.52□□□□□ -0.4
TARDBP-201ENST00000240185 EGLN1Q9GZT9 426 aa12.52□□□□□ -0.4
TARDBP-201ENST00000240185 C19orf53Q9UNZ5 99 aaPredicted RBP12.52□□□□□ -0.4
TARDBP-201ENST00000240185 LRRC37A3O60309 1634 aa12.52□□□□□ -0.4
TARDBP-201ENST00000240185 ARRDC5A6NEK1 342 aa12.52□□□□□ -0.4
TARDBP-201ENST00000240185 RAB29O14966 203 aa12.52□□□□□ -0.4
TARDBP-201ENST00000240185 ZNF737O75373 536 aa12.52□□□□□ -0.4
TARDBP-201ENST00000240185 SELEP16581 610 aa12.52□□□□□ -0.4
TARDBP-201ENST00000240185 SUCLG1P53597 346 aaKnown RBP12.52□□□□□ -0.4
TARDBP-201ENST00000240185 PPP2CAP67775 309 aa12.52□□□□□ -0.4
TARDBP-201ENST00000240185 DHRS2Q13268 280 aa12.52□□□□□ -0.4
TARDBP-201ENST00000240185 KHDC1LQ5JSQ8 128 aa12.52□□□□□ -0.4
TARDBP-201ENST00000240185 OR10AD1Q8NGE0 317 aa12.52□□□□□ -0.4
TARDBP-201ENST00000240185 OR5C1Q8NGR4 320 aa12.52□□□□□ -0.4
TARDBP-201ENST00000240185 OR52N5Q8NH56 324 aa12.52□□□□□ -0.4
TARDBP-201ENST00000240185 ING1Q9UK53 422 aaPredicted RBP12.52□□□□□ -0.4
TARDBP-201ENST00000240185 LEUTXA8MZ59 168 aa12.52□□□□□ -0.41
TARDBP-201ENST00000240185 VAMP5O95183 116 aa12.52□□□□□ -0.41
TARDBP-201ENST00000240185 CD300CQ08708 224 aa12.52□□□□□ -0.41
TARDBP-201ENST00000240185 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.52□□□□□ -0.418e-12■■■■■ 35.2
TARDBP-201ENST00000240185 ZDHHC22Q8N966 263 aa12.52□□□□□ -0.41
TARDBP-201ENST00000240185 DEFB108BQ8NET1 73 aa12.52□□□□□ -0.41
TARDBP-201ENST00000240185 RLN3Q8WXF3 142 aa12.52□□□□□ -0.41
TARDBP-201ENST00000240185 ATP5SQ99766 215 aa12.52□□□□□ -0.41
TARDBP-201ENST00000240185 TMEM218A2RU14 115 aa12.52□□□□□ -0.41
TARDBP-201ENST00000240185 FBLL1A6NHQ2 334 aaKnown RBP12.52□□□□□ -0.41
TARDBP-201ENST00000240185 HPP00738 406 aa12.52□□□□□ -0.41
TARDBP-201ENST00000240185 PRSS1P07477 247 aa12.52□□□□□ -0.41
TARDBP-201ENST00000240185 FPR2P25090 351 aa12.52□□□□□ -0.41
TARDBP-201ENST00000240185 RAG2P55895 527 aa12.52□□□□□ -0.41
TARDBP-201ENST00000240185 AGBL5Q8NDL9 886 aa12.52□□□□□ -0.41
TARDBP-201ENST00000240185 OR1L4Q8NGR5 311 aa12.52□□□□□ -0.41
TARDBP-201ENST00000240185 NXPE3Q969Y0 559 aa12.52□□□□□ -0.41
TARDBP-201ENST00000240185 LPAR5Q9H1C0 372 aa12.52□□□□□ -0.41
TARDBP-201ENST00000240185 MAP1BP46821 2468 aaKnown RBP12.52□□□□□ -0.41
TARDBP-201ENST00000240185 CACNA1CQ13936 2221 aa12.52□□□□□ -0.41
TARDBP-201ENST00000240185 PTHLHP12272 177 aa12.52□□□□□ -0.41
TARDBP-201ENST00000240185 ZNF250P15622 560 aa12.52□□□□□ -0.41
TARDBP-201ENST00000240185 ACAA2P42765 397 aaKnown RBP12.52□□□□□ -0.41
TARDBP-201ENST00000240185 TMEM267Q0VDI3 215 aaPredicted RBP12.52□□□□□ -0.41
TARDBP-201ENST00000240185 RAB32Q13637 225 aa12.52□□□□□ -0.41
TARDBP-201ENST00000240185 OR5D13Q8NGL4 314 aa12.52□□□□□ -0.41
TARDBP-201ENST00000240185 CHAC2Q8WUX2 184 aa12.52□□□□□ -0.41
TARDBP-201ENST00000240185 HES4Q9HCC6 221 aa12.52□□□□□ -0.41
TARDBP-201ENST00000240185 FGF21Q9NSA1 209 aa12.52□□□□□ -0.41
TARDBP-201ENST00000240185 LPAR3Q9UBY5 353 aa12.52□□□□□ -0.41
TARDBP-201ENST00000240185 TCRBV16S1A1N1A0A5B0 115 aa12.51□□□□□ -0.41
TARDBP-201ENST00000240185 FCMRO60667 390 aa12.51□□□□□ -0.41
TARDBP-201ENST00000240185 MPC2O95563 127 aa12.51□□□□□ -0.41
TARDBP-201ENST00000240185 DUSP8Q13202 625 aa12.51□□□□□ -0.41
TARDBP-201ENST00000240185 SCGB1D4Q6XE38 83 aa12.51□□□□□ -0.41
TARDBP-201ENST00000240185 LINC00696Q6ZRV3 163 aa12.51□□□□□ -0.41
TARDBP-201ENST00000240185 C17orf78Q8N4C9 275 aa12.51□□□□□ -0.41
TARDBP-201ENST00000240185 DUSP18Q8NEJ0 188 aa12.51□□□□□ -0.41
TARDBP-201ENST00000240185 EDARADDQ8WWZ3 215 aa12.51□□□□□ -0.41
TARDBP-201ENST00000240185 BOD1Q96IK1 185 aa12.51□□□□□ -0.41
TARDBP-201ENST00000240185 TEX101Q9BY14 249 aa12.51□□□□□ -0.41
TARDBP-201ENST00000240185 SLCO1C1Q9NYB5 712 aa12.51□□□□□ -0.41
TARDBP-201ENST00000240185 RASL12Q9NYN1 266 aa12.51□□□□□ -0.41
TARDBP-201ENST00000240185 ARID1AO14497 2285 aa12.51□□□□□ -0.41
TARDBP-201ENST00000240185 PRSS37A4D1T9 235 aa12.51□□□□□ -0.41
TARDBP-201ENST00000240185 H3BVH4 76 aa12.51□□□□□ -0.41
TARDBP-201ENST00000240185 OTPQ5XKR4 325 aa12.51□□□□□ -0.41
TARDBP-201ENST00000240185 BVESQ8NE79 360 aa12.51□□□□□ -0.41
TARDBP-201ENST00000240185 SRD5A3Q9H8P0 318 aa12.51□□□□□ -0.41
TARDBP-201ENST00000240185 RNF24Q9Y225 148 aa12.51□□□□□ -0.41
TARDBP-201ENST00000240185 WASHC3Q9Y3C0 194 aa12.51□□□□□ -0.41
TARDBP-201ENST00000240185 LMO7Q8WWI1 1683 aa12.51□□□□□ -0.41
TARDBP-201ENST00000240185 SPEF2Q9C093 1822 aa12.51□□□□□ -0.41
TARDBP-201ENST00000240185 DAOP14920 347 aa12.51□□□□□ -0.41
TARDBP-201ENST00000240185 OR10J1P30954 320 aa12.51□□□□□ -0.41
TARDBP-201ENST00000240185 HAAOP46952 286 aa12.51□□□□□ -0.41
TARDBP-201ENST00000240185 SHBQ15464 509 aa12.51□□□□□ -0.41
TARDBP-201ENST00000240185 GSG1Q2KHT4 349 aa12.51□□□□□ -0.41
TARDBP-201ENST00000240185 OSR2Q8N2R0 312 aa12.51□□□□□ -0.41
TARDBP-201ENST00000240185 SPICQ8N5J4 248 aa12.51□□□□□ -0.41
TARDBP-201ENST00000240185 HS3ST2Q9Y278 367 aa12.51□□□□□ -0.41
TARDBP-201ENST00000240185 TNFRSF10CO14798 259 aa12.51□□□□□ -0.41
TARDBP-201ENST00000240185 RRP8O43159 456 aaKnown RBP12.51□□□□□ -0.41
TARDBP-201ENST00000240185 KRASP01116 189 aa12.51□□□□□ -0.41
TARDBP-201ENST00000240185 FKBP2P26885 142 aaKnown RBP12.51□□□□□ -0.41
TARDBP-201ENST00000240185 PNRC1Q12796 327 aaPredicted RBP12.51□□□□□ -0.41
TARDBP-201ENST00000240185 PPP1R1AQ13522 171 aa12.51□□□□□ -0.41
TARDBP-201ENST00000240185 BSXQ3C1V8 233 aa12.51□□□□□ -0.41
TARDBP-201ENST00000240185 CAMKMTQ7Z624 323 aa12.51□□□□□ -0.41
TARDBP-201ENST00000240185 TGIF2LXQ8IUE1 241 aa12.51□□□□□ -0.41
TARDBP-201ENST00000240185 GPX7Q96SL4 187 aaPredicted RBP12.51□□□□□ -0.41
TARDBP-201ENST00000240185 AAMDCQ9H7C9 122 aa12.51□□□□□ -0.41
TARDBP-201ENST00000240185 LYRM4Q9HD34 91 aa12.51□□□□□ -0.41
TARDBP-201ENST00000240185 ANKRD10Q9NXR5 420 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms