RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 SNAPC3Q92966 411 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 HAVCR1Q96D42 359 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 ZNF845Q96IR2 970 aaPredicted RBP7.58□□□□□ -1.2
VPS4B-201ENST00000238497 KCNK17Q96T54 332 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 SH2D2AQ9NP31 389 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 PLSCR2Q9NRY7 297 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 KLF2Q9Y5W3 355 aaPredicted RBP7.58□□□□□ -1.2
VPS4B-201ENST00000238497 DCHS2Q6V1P9 2916 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 APCP25054 2843 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 TMEM272A0A1B0GTI8 110 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 GABARAPH6UMI1 98 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 CRTAPO75718 401 aaPredicted RBP7.58□□□□□ -1.2
VPS4B-201ENST00000238497 LCATP04180 440 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 GNB3P16520 340 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 HTR2BP41595 481 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 CX3CR1P49238 355 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 GMFBP60983 142 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 PLA1AQ53H76 456 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 NKAPLQ5M9Q1 402 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 UNQ9370/PRO34162Q6UXP9 181 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 LRRTM1Q86UE6 522 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 GCNT2Q8N0V5 402 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 DUSP18Q8NEJ0 188 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 OR11H7Q8NGC8 314 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 AKR7LQ8NHP1 331 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 LIPHQ8WWY8 451 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 WDR89Q96FK6 387 aaPredicted RBP7.58□□□□□ -1.2
VPS4B-201ENST00000238497 ACKR4Q9NPB9 350 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 B3GAT1Q9P2W7 334 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 TMA7Q9Y2S6 64 aaKnown RBP7.58□□□□□ -1.2
VPS4B-201ENST00000238497 NUBP2Q9Y5Y2 271 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 FXYD6-FXYD2A0A087WZ82 144 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 A0A0G2JNJ9 132 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 GGT3PA6NGU5 568 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 CTAG2O75638 210 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 ZNF432O94892 652 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 CYB5AP00167 134 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 HRGP04196 525 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 ANXA3P12429 323 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 CCL2P13500 99 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 MSX1P28360 303 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 PTGDSP41222 190 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 TSPAN5P62079 268 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 TMEM244Q5VVB8 128 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 KCTD9Q7L273 389 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 FAM219AQ8IW50 185 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 OR4C16Q8NGL9 310 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 RNF166Q96A37 237 aaPredicted RBP7.58□□□□□ -1.2
VPS4B-201ENST00000238497 OXGR1Q96P68 337 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 TINAGL1Q9GZM7 467 aaPredicted RBP7.58□□□□□ -1.2
VPS4B-201ENST00000238497 CHST6Q9GZX3 395 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 FXYD6Q9H0Q3 95 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 CNTD2Q9H8S5 307 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 CALHM2Q9HA72 323 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 C12orf10Q9HB07 376 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 RABL2AQ9UBK7 228 aaPredicted RBP7.58□□□□□ -1.2
VPS4B-201ENST00000238497 Q9UFV3 132 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 FAM215AQ9Y5M1 114 aa7.58□□□□□ -1.2
VPS4B-201ENST00000238497 FAM230AA0A1W2PPH8 454 aa7.57□□□□□ -1.2
VPS4B-201ENST00000238497 RAB3DO95716 219 aa7.57□□□□□ -1.2
VPS4B-201ENST00000238497 IFNA6P05013 189 aa7.57□□□□□ -1.2
VPS4B-201ENST00000238497 FAHP16930 419 aa7.57□□□□□ -1.2
VPS4B-201ENST00000238497 PI3P19957 117 aa7.57□□□□□ -1.2
VPS4B-201ENST00000238497 POU3F2P20265 443 aaPredicted RBP7.57□□□□□ -1.2
VPS4B-201ENST00000238497 SERPINA2P20848 420 aa7.57□□□□□ -1.2
VPS4B-201ENST00000238497 ANOS1P23352 680 aa7.57□□□□□ -1.2
VPS4B-201ENST00000238497 BTCP35070 178 aa7.57□□□□□ -1.2
VPS4B-201ENST00000238497 ZNF93P35789 620 aaPredicted RBP7.57□□□□□ -1.2
VPS4B-201ENST00000238497 SLC35A1P78382 337 aa7.57□□□□□ -1.2
VPS4B-201ENST00000238497 TLE4Q04727 773 aa7.57□□□□□ -1.2
VPS4B-201ENST00000238497 BRICD5Q6PL45 260 aa7.57□□□□□ -1.2
VPS4B-201ENST00000238497 TMEM200AQ86VY9 491 aa7.57□□□□□ -1.2
VPS4B-201ENST00000238497 OR5D14Q8NGL3 314 aa7.57□□□□□ -1.2
VPS4B-201ENST00000238497 LILRB4Q8NHJ6 448 aa7.57□□□□□ -1.2
VPS4B-201ENST00000238497 RAB40AQ8WXH6 277 aa7.57□□□□□ -1.2
VPS4B-201ENST00000238497 INTS12Q96CB8 462 aaKnown RBP7.57□□□□□ -1.2
VPS4B-201ENST00000238497 SEC22AQ96IW7 307 aa7.57□□□□□ -1.2
VPS4B-201ENST00000238497 ST6GALNAC5Q9BVH7 336 aa7.57□□□□□ -1.2
VPS4B-201ENST00000238497 CRLF2Q9HC73 371 aa7.57□□□□□ -1.2
VPS4B-201ENST00000238497 IFT46Q9NQC8 304 aa7.57□□□□□ -1.2
VPS4B-201ENST00000238497 LOC100289279A0A1B0GTE1 492 aa7.57□□□□□ -1.2
VPS4B-201ENST00000238497 PEX14O75381 377 aa7.57□□□□□ -1.2
VPS4B-201ENST00000238497 ZNF205O95201 554 aa7.57□□□□□ -1.2
VPS4B-201ENST00000238497 TTRP02766 147 aa7.57□□□□□ -1.2
VPS4B-201ENST00000238497 AKR1C4P17516 323 aa7.57□□□□□ -1.2
VPS4B-201ENST00000238497 BDKRB2P30411 391 aa7.57□□□□□ -1.2
VPS4B-201ENST00000238497 CDK10Q15131 360 aa7.57□□□□□ -1.2
VPS4B-201ENST00000238497 PHYHD1Q5SRE7 291 aa7.57□□□□□ -1.2
VPS4B-201ENST00000238497 THEM4Q5T1C6 240 aa7.57□□□□□ -1.2
VPS4B-201ENST00000238497 SFRP5Q5T4F7 317 aa7.57□□□□□ -1.2
VPS4B-201ENST00000238497 RTL6Q6ICC9 239 aa7.57□□□□□ -1.2
VPS4B-201ENST00000238497 NHLRC1Q6VVB1 395 aa7.57□□□□□ -1.2
VPS4B-201ENST00000238497 CATSPERDQ86XM0 798 aa7.57□□□□□ -1.2
VPS4B-201ENST00000238497 FTMTQ8N4E7 242 aa7.57□□□□□ -1.2
VPS4B-201ENST00000238497 CNEP1R1Q8N9A8 125 aa7.57□□□□□ -1.2
VPS4B-201ENST00000238497 NOXO1Q8NFA2 376 aa7.57□□□□□ -1.2
VPS4B-201ENST00000238497 ABHD3Q8WU67 409 aa7.57□□□□□ -1.2
VPS4B-201ENST00000238497 PDCD10Q9BUL8 212 aa7.57□□□□□ -1.2
VPS4B-201ENST00000238497 GLTPQ9NZD2 209 aa7.57□□□□□ -1.2
VPS4B-201ENST00000238497 ZNF319Q9P2F9 582 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms