RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 OVCA2Q8WZ82 227 aa11.6□□□□□ -0.55
VAMP4-201ENST00000236192 ATP5SQ99766 215 aa11.6□□□□□ -0.55
VAMP4-201ENST00000236192 FCRL6Q6DN72 434 aa11.6□□□□□ -0.55
VAMP4-201ENST00000236192 LRRC3BQ96PB8 259 aa11.6□□□□□ -0.55
VAMP4-201ENST00000236192 RNF222A6NCQ9 220 aa11.59□□□□□ -0.55
VAMP4-201ENST00000236192 A8MWP6 167 aa11.59□□□□□ -0.55
VAMP4-201ENST00000236192 GNRH1P01148 92 aa11.59□□□□□ -0.55
VAMP4-201ENST00000236192 ZBTB25P24278 435 aa11.59□□□□□ -0.55
VAMP4-201ENST00000236192 SLC11A1P49279 550 aa11.59□□□□□ -0.55
VAMP4-201ENST00000236192 BAXQ07812 192 aa11.59□□□□□ -0.55
VAMP4-201ENST00000236192 TMEM225Q6GV28 225 aa11.59□□□□□ -0.55
VAMP4-201ENST00000236192 DIO2Q92813 273 aa11.59□□□□□ -0.55
VAMP4-201ENST00000236192 MS4A4AQ96JQ5 239 aa11.59□□□□□ -0.55
VAMP4-201ENST00000236192 C19orf43Q9BQ61 176 aa11.59□□□□□ -0.55
VAMP4-201ENST00000236192 P4HTMQ9NXG6 502 aa11.59□□□□□ -0.55
VAMP4-201ENST00000236192 PLPP1O14494 284 aa11.59□□□□□ -0.55
VAMP4-201ENST00000236192 SNAI1O95863 264 aaPredicted RBP11.59□□□□□ -0.55
VAMP4-201ENST00000236192 NRASP01111 189 aa11.59□□□□□ -0.55
VAMP4-201ENST00000236192 HRASP01112 189 aa11.59□□□□□ -0.55
VAMP4-201ENST00000236192 KRASP01116 189 aa11.59□□□□□ -0.55
VAMP4-201ENST00000236192 CD1AP06126 327 aa11.59□□□□□ -0.55
VAMP4-201ENST00000236192 AMTP48728 403 aa11.59□□□□□ -0.55
VAMP4-201ENST00000236192 LSM6P62312 80 aaKnown RBP11.59□□□□□ -0.55
VAMP4-201ENST00000236192 TMEM255AQ5JRV8 349 aa11.59□□□□□ -0.55
VAMP4-201ENST00000236192 GCNT2Q8N0V5 402 aa11.59□□□□□ -0.55
VAMP4-201ENST00000236192 METTL27Q8N6F8 245 aaPredicted RBP11.59□□□□□ -0.55
VAMP4-201ENST00000236192 FOXN4Q96NZ1 517 aa11.59□□□□□ -0.55
VAMP4-201ENST00000236192 OR8B4Q96RC9 309 aa11.59□□□□□ -0.55
VAMP4-201ENST00000236192 HIST1H2BLQ99880 126 aa11.59□□□□□ -0.55
VAMP4-201ENST00000236192 OR5AC2Q9NZP5 309 aa11.59□□□□□ -0.55
VAMP4-201ENST00000236192 LHX3Q9UBR4 397 aa11.59□□□□□ -0.55
VAMP4-201ENST00000236192 EREGO14944 169 aa11.59□□□□□ -0.55
VAMP4-201ENST00000236192 SLCO2B1O94956 709 aa11.59□□□□□ -0.55
VAMP4-201ENST00000236192 PGA3P0DJD8 388 aa11.59□□□□□ -0.55
VAMP4-201ENST00000236192 FGF5P12034 268 aa11.59□□□□□ -0.55
VAMP4-201ENST00000236192 NPPBP16860 134 aa11.59□□□□□ -0.55
VAMP4-201ENST00000236192 SAMD13Q5VXD3 122 aa11.59□□□□□ -0.55
VAMP4-201ENST00000236192 MS4A6EQ96DS6 147 aa11.59□□□□□ -0.55
VAMP4-201ENST00000236192 GINS3Q9BRX5 216 aa11.59□□□□□ -0.55
VAMP4-201ENST00000236192 CHST11Q9NPF2 352 aa11.59□□□□□ -0.55
VAMP4-201ENST00000236192 ST6GALNAC2Q9UJ37 374 aa11.59□□□□□ -0.55
VAMP4-201ENST00000236192 NUP98P52948 1817 aa11.59□□□□□ -0.55
VAMP4-201ENST00000236192 A0A0A6YYC8 382 aaPredicted RBP11.59□□□□□ -0.55
VAMP4-201ENST00000236192 IDSB3KWA1 339 aa11.59□□□□□ -0.55
VAMP4-201ENST00000236192 I3L1I5 382 aaPredicted RBP11.59□□□□□ -0.55
VAMP4-201ENST00000236192 PTGESO14684 152 aa11.59□□□□□ -0.55
VAMP4-201ENST00000236192 ARL3P36405 182 aa11.59□□□□□ -0.55
VAMP4-201ENST00000236192 AGERQ15109 404 aa11.59□□□□□ -0.55
VAMP4-201ENST00000236192 C1orf185Q5T7R7 199 aa11.59□□□□□ -0.55
VAMP4-201ENST00000236192 ALKAL1Q6UXT8 129 aa11.59□□□□□ -0.55
VAMP4-201ENST00000236192 C16orf82Q7Z2V1 217 aa11.59□□□□□ -0.55
VAMP4-201ENST00000236192 NRSN1Q8IZ57 195 aa11.59□□□□□ -0.55
VAMP4-201ENST00000236192 ADAD2Q8NCV1 583 aaKnown RBP11.59□□□□□ -0.55
VAMP4-201ENST00000236192 SARGQ9BW04 601 aa11.59□□□□□ -0.55
VAMP4-201ENST00000236192 FAM117AQ9C073 453 aa11.59□□□□□ -0.55
VAMP4-201ENST00000236192 MSL2Q9HCI7 577 aa11.59□□□□□ -0.55
VAMP4-201ENST00000236192 WIPI2Q9Y4P8 454 aa11.59□□□□□ -0.55
VAMP4-201ENST00000236192 ID4P47928 161 aa11.58□□□□□ -0.55
VAMP4-201ENST00000236192 ZNF133P52736 654 aaPredicted RBP11.58□□□□□ -0.55
VAMP4-201ENST00000236192 GABREP78334 506 aa11.58□□□□□ -0.55
VAMP4-201ENST00000236192 VGLL4Q14135 290 aa11.58□□□□□ -0.55
VAMP4-201ENST00000236192 MPV17LQ2QL34 196 aa11.58□□□□□ -0.55
VAMP4-201ENST00000236192 ZNF468Q5VIY5 522 aaPredicted RBP11.58□□□□□ -0.55
VAMP4-201ENST00000236192 ZNF765Q7L2R6 523 aa11.58□□□□□ -0.55
VAMP4-201ENST00000236192 OR4A4PQ8NGN8 299 aa11.58□□□□□ -0.55
VAMP4-201ENST00000236192 PINX1Q96BK5 328 aaKnown RBP11.58□□□□□ -0.55
VAMP4-201ENST00000236192 SLC25A38Q96DW6 304 aa11.58□□□□□ -0.55
VAMP4-201ENST00000236192 ZFP30Q9Y2G7 519 aa11.58□□□□□ -0.55
VAMP4-201ENST00000236192 WASHC3Q9Y3C0 194 aa11.58□□□□□ -0.55
VAMP4-201ENST00000236192 YIPF1Q9Y548 306 aa11.58□□□□□ -0.55
VAMP4-201ENST00000236192 GAGE10A6NGK3 116 aa11.58□□□□□ -0.56
VAMP4-201ENST00000236192 COCHO43405 550 aa11.58□□□□□ -0.56
VAMP4-201ENST00000236192 HSBP1O75506 76 aa11.58□□□□□ -0.56
VAMP4-201ENST00000236192 MST1P26927 711 aa11.58□□□□□ -0.56
VAMP4-201ENST00000236192 PIGPP57054 158 aa11.58□□□□□ -0.56
VAMP4-201ENST00000236192 LRRC18Q8N456 261 aa11.58□□□□□ -0.56
VAMP4-201ENST00000236192 Q8WTZ3 238 aa11.58□□□□□ -0.56
VAMP4-201ENST00000236192 CPEB1Q9BZB8 566 aaKnown RBP11.58□□□□□ -0.56
VAMP4-201ENST00000236192 SMOC1Q9H4F8 434 aa11.58□□□□□ -0.56
VAMP4-201ENST00000236192 GSX1Q9H4S2 264 aaPredicted RBP11.58□□□□□ -0.56
VAMP4-201ENST00000236192 SRD5A3Q9H8P0 318 aa11.58□□□□□ -0.56
VAMP4-201ENST00000236192 COL2A1P02458 1487 aaPredicted RBP11.58□□□□□ -0.56
VAMP4-201ENST00000236192 ZBTB42B2RXF5 422 aa11.58□□□□□ -0.56
VAMP4-201ENST00000236192 NPIPB8E9PQR5 432 aa11.58□□□□□ -0.56
VAMP4-201ENST00000236192 H0YL77 283 aa11.58□□□□□ -0.56
VAMP4-201ENST00000236192 C1SP09871 688 aa11.58□□□□□ -0.56
VAMP4-201ENST00000236192 TMIGD3P0DMS9 266 aaPredicted RBP11.58□□□□□ -0.56
VAMP4-201ENST00000236192 ADCYAP1P18509 176 aa11.58□□□□□ -0.56
VAMP4-201ENST00000236192 KLK2P20151 261 aa11.58□□□□□ -0.56
VAMP4-201ENST00000236192 CD1CP29017 333 aa11.58□□□□□ -0.56
VAMP4-201ENST00000236192 PRLHRP49683 370 aa11.58□□□□□ -0.56
VAMP4-201ENST00000236192 FHITP49789 147 aa11.58□□□□□ -0.56
VAMP4-201ENST00000236192 DEFB134Q4QY38 66 aa11.58□□□□□ -0.56
VAMP4-201ENST00000236192 HIKESHIQ53FT3 197 aa11.58□□□□□ -0.56
VAMP4-201ENST00000236192 RTN4RL1Q86UN2 441 aaPredicted RBP11.58□□□□□ -0.56
VAMP4-201ENST00000236192 TSSK2Q96PF2 358 aa11.58□□□□□ -0.56
VAMP4-201ENST00000236192 HSPB9Q9BQS6 159 aa11.58□□□□□ -0.56
VAMP4-201ENST00000236192 UTP23Q9BRU9 249 aaKnown RBP11.58□□□□□ -0.56
VAMP4-201ENST00000236192 ENY2Q9NPA8 101 aa11.58□□□□□ -0.56
VAMP4-201ENST00000236192 LOC107986453A0A1B0GWG9 222 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms