RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 DCKP27707 260 aa9.56□□□□□ -0.88
SF3B6-201ENST00000233468 ISL1P61371 349 aa9.56□□□□□ -0.88
SF3B6-201ENST00000233468 RIPPLY1Q0D2K3 151 aa9.56□□□□□ -0.88
SF3B6-201ENST00000233468 RIN1Q13671 783 aa9.56□□□□□ -0.88
SF3B6-201ENST00000233468 OR8B8Q15620 311 aa9.56□□□□□ -0.88
SF3B6-201ENST00000233468 TMEM255AQ5JRV8 349 aa9.56□□□□□ -0.88
SF3B6-201ENST00000233468 ZBTB37Q5TC79 503 aa9.56□□□□□ -0.88
SF3B6-201ENST00000233468 LIPNQ5VXI9 398 aa9.56□□□□□ -0.88
SF3B6-201ENST00000233468 Q6ZR03 302 aa9.56□□□□□ -0.88
SF3B6-201ENST00000233468 THAP5Q7Z6K1 395 aa9.56□□□□□ -0.88
SF3B6-201ENST00000233468 C1orf87Q8N0U7 546 aa9.56□□□□□ -0.88
SF3B6-201ENST00000233468 OR11L1Q8NGX0 322 aa9.56□□□□□ -0.88
SF3B6-201ENST00000233468 OR8S1Q8NH09 359 aa9.56□□□□□ -0.88
SF3B6-201ENST00000233468 GTF3AQ92664 365 aaKnown RBP9.56□□□□□ -0.88
SF3B6-201ENST00000233468 TFAP2CQ92754 450 aa9.56□□□□□ -0.88
SF3B6-201ENST00000233468 MEGF10Q96KG7 1140 aa9.56□□□□□ -0.88
SF3B6-201ENST00000233468 SIGLEC11Q96RL6 698 aa9.56□□□□□ -0.88
SF3B6-201ENST00000233468 ADAT1Q9BUB4 502 aaKnown RBP9.56□□□□□ -0.88
SF3B6-201ENST00000233468 TTTY10Q9BZA0 68 aa9.56□□□□□ -0.88
SF3B6-201ENST00000233468 BPESC1Q9GZL8 116 aa9.56□□□□□ -0.88
SF3B6-201ENST00000233468 AMBNQ9NP70 447 aa9.56□□□□□ -0.88
SF3B6-201ENST00000233468 ZNF275Q9NSD4 429 aaPredicted RBP9.56□□□□□ -0.88
SF3B6-201ENST00000233468 MPC1Q9Y5U8 109 aa9.56□□□□□ -0.88
SF3B6-201ENST00000233468 A0A1B0GVI7 797 aa9.55□□□□□ -0.88
SF3B6-201ENST00000233468 EFCAB10A6NFE3 127 aa9.55□□□□□ -0.88
SF3B6-201ENST00000233468 ATP6V1G2O95670 118 aa9.55□□□□□ -0.88
SF3B6-201ENST00000233468 CLIC3O95833 236 aa9.55□□□□□ -0.88
SF3B6-201ENST00000233468 CD200P41217 278 aa9.55□□□□□ -0.88
SF3B6-201ENST00000233468 GATA4P43694 442 aa9.55□□□□□ -0.88
SF3B6-201ENST00000233468 GZMKP49863 264 aa9.55□□□□□ -0.88
SF3B6-201ENST00000233468 ZNF85Q03923 595 aa9.55□□□□□ -0.88
SF3B6-201ENST00000233468 GALEQ14376 348 aa9.55□□□□□ -0.88
SF3B6-201ENST00000233468 CDONQ4KMG0 1287 aa9.55□□□□□ -0.88
SF3B6-201ENST00000233468 ZNF684Q5T5D7 378 aa9.55□□□□□ -0.88
SF3B6-201ENST00000233468 TMPRSS11AQ6ZMR5 421 aa9.55□□□□□ -0.88
SF3B6-201ENST00000233468 DOK3Q7L591 496 aa9.55□□□□□ -0.88
SF3B6-201ENST00000233468 ELMOD2Q8IZ81 293 aa9.55□□□□□ -0.88
SF3B6-201ENST00000233468 SYS1Q8N2H4 156 aa9.55□□□□□ -0.88
SF3B6-201ENST00000233468 SEMA6DQ8NFY4 1073 aa9.55□□□□□ -0.88
SF3B6-201ENST00000233468 OR10AD1Q8NGE0 317 aa9.55□□□□□ -0.88
SF3B6-201ENST00000233468 APH1BQ8WW43 257 aa9.55□□□□□ -0.88
SF3B6-201ENST00000233468 ITLN1Q8WWA0 313 aa9.55□□□□□ -0.88
SF3B6-201ENST00000233468 YIPF5Q969M3 257 aa9.55□□□□□ -0.88
SF3B6-201ENST00000233468 MICU1Q9BPX6 476 aa9.55□□□□□ -0.88
SF3B6-201ENST00000233468 PAPOLGQ9BWT3 736 aaKnown RBP9.55□□□□□ -0.88
SF3B6-201ENST00000233468 FN3KRPQ9HA64 309 aa9.55□□□□□ -0.88
SF3B6-201ENST00000233468 TMEM106BQ9NUM4 274 aa9.55□□□□□ -0.88
SF3B6-201ENST00000233468 AASSQ9UDR5 926 aa9.55□□□□□ -0.88
SF3B6-201ENST00000233468 ENPP5Q9UJA9 477 aa9.55□□□□□ -0.88
SF3B6-201ENST00000233468 ZNF816-ZNF321PA0A0X1KG74 233 aa9.54□□□□□ -0.88
SF3B6-201ENST00000233468 DHRS7CA6NNS2 312 aa9.54□□□□□ -0.88
SF3B6-201ENST00000233468 F5H5P2 479 aa9.54□□□□□ -0.88
SF3B6-201ENST00000233468 LYNX1G3V0Z9 82 aa9.54□□□□□ -0.88
SF3B6-201ENST00000233468 J3QLW9 94 aa9.54□□□□□ -0.88
SF3B6-201ENST00000233468 MLNRO43193 412 aa9.54□□□□□ -0.88
SF3B6-201ENST00000233468 FAM20BO75063 409 aa9.54□□□□□ -0.88
SF3B6-201ENST00000233468 WBP4O75554 376 aaKnown RBP9.54□□□□□ -0.88
SF3B6-201ENST00000233468 RP2O75695 350 aa9.54□□□□□ -0.88
SF3B6-201ENST00000233468 DHRS3O75911 302 aa9.54□□□□□ -0.88
SF3B6-201ENST00000233468 CST4P01036 141 aa9.54□□□□□ -0.88
SF3B6-201ENST00000233468 IGHA1P01876 353 aa9.54□□□□□ -0.88
SF3B6-201ENST00000233468 HTR1AP08908 422 aa9.54□□□□□ -0.88
SF3B6-201ENST00000233468 UBCP0CG48 685 aaKnown RBP9.54□□□□□ -0.88
SF3B6-201ENST00000233468 LYNX1P0DP58 116 aa9.54□□□□□ -0.88
SF3B6-201ENST00000233468 ZNF19P17023 458 aa9.54□□□□□ -0.88
SF3B6-201ENST00000233468 GBX2P52951 348 aaPredicted RBP9.54□□□□□ -0.88
SF3B6-201ENST00000233468 ZNF181Q2M3W8 571 aa9.54□□□□□ -0.88
SF3B6-201ENST00000233468 TP53I3Q53FA7 332 aa9.54□□□□□ -0.88
SF3B6-201ENST00000233468 TMEM244Q5VVB8 128 aa9.54□□□□□ -0.88
SF3B6-201ENST00000233468 SSX6Q7RTT6 188 aa9.54□□□□□ -0.88
SF3B6-201ENST00000233468 CATSPERDQ86XM0 798 aa9.54□□□□□ -0.88
SF3B6-201ENST00000233468 RFLNBQ8N5W9 214 aa9.54□□□□□ -0.88
SF3B6-201ENST00000233468 OR52I1Q8NGK6 324 aa9.54□□□□□ -0.88
SF3B6-201ENST00000233468 SPATA3Q8NHX4 192 aa9.54□□□□□ -0.88
SF3B6-201ENST00000233468 CNIH3Q8TBE1 160 aa9.54□□□□□ -0.88
SF3B6-201ENST00000233468 OR51E1Q8TCB6 317 aa9.54□□□□□ -0.88
SF3B6-201ENST00000233468 NRG4Q8WWG1 115 aa9.54□□□□□ -0.88
SF3B6-201ENST00000233468 TMEM80Q96HE8 168 aa9.54□□□□□ -0.88
SF3B6-201ENST00000233468 ALG8Q9BVK2 526 aa9.54□□□□□ -0.88
SF3B6-201ENST00000233468 RTL8AQ9BWD3 113 aa9.54□□□□□ -0.88
SF3B6-201ENST00000233468 JAM3Q9BX67 310 aa9.54□□□□□ -0.88
SF3B6-201ENST00000233468 GCM1Q9NP62 436 aa9.54□□□□□ -0.88
SF3B6-201ENST00000233468 FGF20Q9NP95 211 aaPredicted RBP9.54□□□□□ -0.88
SF3B6-201ENST00000233468 G6PC2Q9NQR9 355 aa9.54□□□□□ -0.88
SF3B6-201ENST00000233468 GPR84Q9NQS5 396 aa9.54□□□□□ -0.88
SF3B6-201ENST00000233468 SCN3BQ9NY72 215 aa9.54□□□□□ -0.88
SF3B6-201ENST00000233468 CNOT2Q9NZN8 540 aaKnown RBP9.54□□□□□ -0.88
SF3B6-201ENST00000233468 ZNF319Q9P2F9 582 aa9.54□□□□□ -0.88
SF3B6-201ENST00000233468 EXOSC1Q9Y3B2 195 aaKnown RBP9.54□□□□□ -0.88
SF3B6-201ENST00000233468 C5orf63A6NC05 138 aa9.53□□□□□ -0.88
SF3B6-201ENST00000233468 TMEM210A6NLX4 147 aa9.53□□□□□ -0.88
SF3B6-201ENST00000233468 PRR32B1ATL7 298 aa9.53□□□□□ -0.88
SF3B6-201ENST00000233468 H0YL77 283 aa9.53□□□□□ -0.88
SF3B6-201ENST00000233468 MAGEB4O15481 346 aaPredicted RBP9.53□□□□□ -0.88
SF3B6-201ENST00000233468 SYT7O43581 403 aa9.53□□□□□ -0.88
SF3B6-201ENST00000233468 SRSF10O75494 262 aaKnown RBP9.53□□□□□ -0.88
SF3B6-201ENST00000233468 SERPINA3P01011 423 aa9.53□□□□□ -0.88
SF3B6-201ENST00000233468 TTRP02766 147 aa9.53□□□□□ -0.88
SF3B6-201ENST00000233468 HLA-DPB1P04440 258 aa9.53□□□□□ -0.88
SF3B6-201ENST00000233468 CCDC159P0C7I6 412 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms