RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 KTI12Q96EK9 354 aaPredicted RBP11.58□□□□□ -0.56
MSH2-201ENST00000233146 MS4A8Q9BY19 250 aa11.58□□□□□ -0.56
MSH2-201ENST00000233146 ULBP3Q9BZM4 244 aa11.58□□□□□ -0.56
MSH2-201ENST00000233146 MRPS2Q9Y399 296 aaKnown RBP11.58□□□□□ -0.56
MSH2-201ENST00000233146 MRPS23Q9Y3D9 190 aaKnown RBP11.58□□□□□ -0.56
MSH2-201ENST00000233146 WSB1Q9Y6I7 421 aa11.58□□□□□ -0.56
MSH2-201ENST00000233146 EML5Q05BV3 1969 aa11.58□□□□□ -0.56
MSH2-201ENST00000233146 OR2AG2A6NM03 316 aa11.57□□□□□ -0.56
MSH2-201ENST00000233146 CEACAM18A8MTB9 384 aa11.57□□□□□ -0.56
MSH2-201ENST00000233146 UCP3P55916 312 aa11.57□□□□□ -0.56
MSH2-201ENST00000233146 VAMP2P63027 116 aa11.57□□□□□ -0.56
MSH2-201ENST00000233146 PCK2Q16822 640 aa11.57□□□□□ -0.56
MSH2-201ENST00000233146 ELOA3BQ3SY89 546 aa11.57□□□□□ -0.56
MSH2-201ENST00000233146 ASPHD2Q6ICH7 369 aa11.57□□□□□ -0.56
MSH2-201ENST00000233146 LINC01551Q86U37 167 aa11.57□□□□□ -0.56
MSH2-201ENST00000233146 ADIPOR2Q86V24 386 aa11.57□□□□□ -0.56
MSH2-201ENST00000233146 C12orf76Q8N812 135 aaPredicted RBP11.57□□□□□ -0.56
MSH2-201ENST00000233146 ELOA3Q8NG57 546 aa11.57□□□□□ -0.56
MSH2-201ENST00000233146 OR8G5Q8NG78 346 aa11.57□□□□□ -0.56
MSH2-201ENST00000233146 KCNE4Q8WWG9 221 aa11.57□□□□□ -0.56
MSH2-201ENST00000233146 ZNF514Q96K75 400 aaPredicted RBP11.57□□□□□ -0.56
MSH2-201ENST00000233146 ADAD1Q96M93 576 aaKnown RBP11.57□□□□□ -0.56
MSH2-201ENST00000233146 PCGF1Q9BSM1 259 aa11.57□□□□□ -0.56
MSH2-201ENST00000233146 KIAA1456Q9P272 454 aa11.57□□□□□ -0.56
MSH2-201ENST00000233146 KLHDC2Q9Y2U9 406 aa11.57□□□□□ -0.56
MSH2-201ENST00000233146 TMEM212A6NML5 194 aa11.57□□□□□ -0.56
MSH2-201ENST00000233146 AQP7O14520 342 aa11.57□□□□□ -0.56
MSH2-201ENST00000233146 KAT7O95251 611 aa11.57□□□□□ -0.56
MSH2-201ENST00000233146 CTSHP09668 335 aa11.57□□□□□ -0.56
MSH2-201ENST00000233146 CTHP32929 405 aa11.57□□□□□ -0.56
MSH2-201ENST00000233146 THPOP40225 353 aa11.57□□□□□ -0.56
MSH2-201ENST00000233146 DMWDQ09019 674 aa11.57□□□□□ -0.56
MSH2-201ENST00000233146 SP5Q6BEB4 398 aaPredicted RBP11.57□□□□□ -0.56
MSH2-201ENST00000233146 ZNF880Q6PDB4 577 aa11.57□□□□□ -0.56
MSH2-201ENST00000233146 MAML2Q8IZL2 1156 aaPredicted RBP11.57□□□□□ -0.56
MSH2-201ENST00000233146 LINC01555Q8NAE3 123 aa11.57□□□□□ -0.56
MSH2-201ENST00000233146 PLPP7Q8NBV4 271 aa11.57□□□□□ -0.56
MSH2-201ENST00000233146 OR2L2Q8NH16 312 aa11.57□□□□□ -0.56
MSH2-201ENST00000233146 VPS25Q9BRG1 176 aa11.57□□□□□ -0.56
MSH2-201ENST00000233146 PYGO2Q9BRQ0 406 aa11.57□□□□□ -0.56
MSH2-201ENST00000233146 NUDT9Q9BW91 350 aa11.57□□□□□ -0.56
MSH2-201ENST00000233146 CNTD2Q9H8S5 307 aa11.57□□□□□ -0.56
MSH2-201ENST00000233146 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.57□□□□□ -0.56
MSH2-201ENST00000233146 SERGEFQ9UGK8 458 aa11.57□□□□□ -0.56
MSH2-201ENST00000233146 YIPF1Q9Y548 306 aa11.57□□□□□ -0.56
MSH2-201ENST00000233146 CLDN16Q9Y5I7 305 aa11.57□□□□□ -0.56
MSH2-201ENST00000233146 LIPGQ9Y5X9 500 aa11.57□□□□□ -0.56
MSH2-201ENST00000233146 A0A1W2PS29 197 aa11.57□□□□□ -0.56
MSH2-201ENST00000233146 MBLAC1A4D2B0 266 aaPredicted RBP11.57□□□□□ -0.56
MSH2-201ENST00000233146 SYNDIG1LA6NDD5 238 aa11.57□□□□□ -0.56
MSH2-201ENST00000233146 ATXN7O15265 892 aaPredicted RBP11.57□□□□□ -0.56
MSH2-201ENST00000233146 C1orf105O95561 183 aa11.57□□□□□ -0.56
MSH2-201ENST00000233146 PNPP00491 289 aa11.57□□□□□ -0.56
MSH2-201ENST00000233146 SOD2P04179 222 aa11.57□□□□□ -0.56
MSH2-201ENST00000233146 ALDH3B1P43353 468 aa11.57□□□□□ -0.56
MSH2-201ENST00000233146 GLB1LQ6UWU2 654 aa11.57□□□□□ -0.56
MSH2-201ENST00000233146 ADGRE4PQ86SQ3 457 aa11.57□□□□□ -0.56
MSH2-201ENST00000233146 TNFRSF14Q92956 283 aa11.57□□□□□ -0.56
MSH2-201ENST00000233146 MTHFD2LQ9H903 347 aaPredicted RBP11.57□□□□□ -0.56
MSH2-201ENST00000233146 APOBEC3BQ9UH17 382 aaKnown RBP11.57□□□□□ -0.56
MSH2-201ENST00000233146 IER3IP1Q9Y5U9 82 aa11.57□□□□□ -0.56
MSH2-201ENST00000233146 COL9A2Q14055 689 aaPredicted RBP11.56□□□□□ -0.56
MSH2-201ENST00000233146 NFATC4Q14934 902 aa11.56□□□□□ -0.56
MSH2-201ENST00000233146 ZNF506Q5JVG8 444 aa11.56□□□□□ -0.56
MSH2-201ENST00000233146 LINC01590Q5TEZ4 76 aa11.56□□□□□ -0.56
MSH2-201ENST00000233146 RTL6Q6ICC9 239 aa11.56□□□□□ -0.56
MSH2-201ENST00000233146 ZNF66Q6ZN08 573 aa11.56□□□□□ -0.56
MSH2-201ENST00000233146 LRP11Q86VZ4 500 aa11.56□□□□□ -0.56
MSH2-201ENST00000233146 TMEM170AQ8WVE7 144 aa11.56□□□□□ -0.56
MSH2-201ENST00000233146 TECTBQ96PL2 329 aa11.56□□□□□ -0.56
MSH2-201ENST00000233146 RXFP3Q9NSD7 469 aa11.56□□□□□ -0.56
MSH2-201ENST00000233146 TRAV39A0A0B4J263 110 aa11.56□□□□□ -0.56
MSH2-201ENST00000233146 ZNF705FA8MVS1 300 aaPredicted RBP11.56□□□□□ -0.56
MSH2-201ENST00000233146 NUDT21O43809 227 aaKnown RBP11.56□□□□□ -0.56
MSH2-201ENST00000233146 ZNF705DP0CH99 300 aaPredicted RBP11.56□□□□□ -0.56
MSH2-201ENST00000233146 ZNF705BP0CI00 300 aaPredicted RBP11.56□□□□□ -0.56
MSH2-201ENST00000233146 WNT5AP41221 380 aa11.56□□□□□ -0.56
MSH2-201ENST00000233146 RANP62826 216 aaKnown RBP11.56□□□□□ -0.56
MSH2-201ENST00000233146 DUSP2Q05923 314 aa11.56□□□□□ -0.56
MSH2-201ENST00000233146 FZD2Q14332 565 aa11.56□□□□□ -0.56
MSH2-201ENST00000233146 TMEM182Q6ZP80 229 aaPredicted RBP11.56□□□□□ -0.56
MSH2-201ENST00000233146 OR5L2Q8NGL0 311 aa11.56□□□□□ -0.56
MSH2-201ENST00000233146 SLC22A12Q96S37 553 aa11.56□□□□□ -0.56
MSH2-201ENST00000233146 NMNAT3Q96T66 252 aa11.56□□□□□ -0.56
MSH2-201ENST00000233146 CXXC1Q9P0U4 656 aaPredicted RBP11.56□□□□□ -0.56
MSH2-201ENST00000233146 MRPS18BQ9Y676 258 aaKnown RBP11.56□□□□□ -0.56
MSH2-201ENST00000233146 LAMA2P24043 3122 aaKnown RBP11.55□□□□□ -0.56
MSH2-201ENST00000233146 TSPAN6O43657 245 aa11.55□□□□□ -0.56
MSH2-201ENST00000233146 TMEM225BP0DP42 221 aa11.55□□□□□ -0.56
MSH2-201ENST00000233146 PRAMEF14Q5SWL7 426 aa11.55□□□□□ -0.56
MSH2-201ENST00000233146 GLYATL3Q5SZD4 288 aa11.55□□□□□ -0.56
MSH2-201ENST00000233146 ZPLD1Q8TCW7 415 aa11.55□□□□□ -0.56
MSH2-201ENST00000233146 SLC35A4Q96G79 324 aa11.55□□□□□ -0.56
MSH2-201ENST00000233146 RBKSQ9H477 322 aa11.55□□□□□ -0.56
MSH2-201ENST00000233146 P4HTMQ9NXG6 502 aa11.55□□□□□ -0.56
MSH2-201ENST00000233146 RNF115Q9Y4L5 304 aa11.55□□□□□ -0.56
MSH2-201ENST00000233146 A0A0C4DFX4 3053 aa11.55□□□□□ -0.56
MSH2-201ENST00000233146 CENPVL1A0A0U1RR11 272 aa11.55□□□□□ -0.56
MSH2-201ENST00000233146 CDC14CA4D256 554 aa11.55□□□□□ -0.56
MSH2-201ENST00000233146 AKR1A1P14550 325 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms