RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 TNK1Q13470 666 aa20.6■□□□□ 0.89
RRP9-201ENST00000232888 RAB12Q6IQ22 244 aa20.6■□□□□ 0.89
RRP9-201ENST00000232888 GFRALQ6UXV0 394 aa20.6■□□□□ 0.89
RRP9-201ENST00000232888 SNRNP40Q96DI7 357 aaKnown RBP20.6■□□□□ 0.89
RRP9-201ENST00000232888 FRYQ5TBA9 3013 aa20.6■□□□□ 0.89
RRP9-201ENST00000232888 ZNF816-ZNF321PA0A0X1KG74 233 aa20.59■□□□□ 0.89
RRP9-201ENST00000232888 PLA2G10O15496 165 aa20.59■□□□□ 0.89
RRP9-201ENST00000232888 EFNB2P52799 333 aa20.59■□□□□ 0.89
RRP9-201ENST00000232888 QRFPP83859 136 aa20.59■□□□□ 0.89
RRP9-201ENST00000232888 RBPJQ06330 500 aa20.59■□□□□ 0.89
RRP9-201ENST00000232888 KISS1Q15726 138 aa20.59■□□□□ 0.89
RRP9-201ENST00000232888 AWAT2Q6E213 333 aa20.59■□□□□ 0.89
RRP9-201ENST00000232888 YIPF5Q969M3 257 aa20.59■□□□□ 0.89
RRP9-201ENST00000232888 ITPKCQ96DU7 683 aa20.59■□□□□ 0.89
RRP9-201ENST00000232888 GPER1Q99527 375 aa20.59■□□□□ 0.89
RRP9-201ENST00000232888 ATG5Q9H1Y0 275 aa20.59■□□□□ 0.89
RRP9-201ENST00000232888 MRPS28Q9Y2Q9 187 aaKnown RBP20.59■□□□□ 0.89
RRP9-201ENST00000232888 ANKRD11Q6UB99 2663 aaPredicted RBP20.59■□□□□ 0.89
RRP9-201ENST00000232888 ASPMQ8IZT6 3477 aa20.59■□□□□ 0.89
RRP9-201ENST00000232888 GMDSO60547 372 aa20.59■□□□□ 0.89
RRP9-201ENST00000232888 GLI4P10075 376 aa20.59■□□□□ 0.89
RRP9-201ENST00000232888 PLA2G7Q13093 441 aa20.59■□□□□ 0.89
RRP9-201ENST00000232888 ZNF57Q68EA5 555 aaPredicted RBP20.59■□□□□ 0.89
RRP9-201ENST00000232888 UNQ6494/PRO21346Q6UXR6 183 aa20.59■□□□□ 0.89
RRP9-201ENST00000232888 MRPL21Q7Z2W9 205 aaKnown RBP20.59■□□□□ 0.89
RRP9-201ENST00000232888 IZUMO1Q8IYV9 350 aa20.59■□□□□ 0.89
RRP9-201ENST00000232888 FCAMRQ8WWV6 532 aa20.59■□□□□ 0.89
RRP9-201ENST00000232888 PIGTQ969N2 578 aa20.59■□□□□ 0.89
RRP9-201ENST00000232888 NUDT16L1Q9BRJ7 211 aaKnown RBP20.59■□□□□ 0.89
RRP9-201ENST00000232888 OPN3Q9H1Y3 402 aaPredicted RBP20.59■□□□□ 0.89
RRP9-201ENST00000232888 KCNN3Q9UGI6 736 aa20.59■□□□□ 0.89
RRP9-201ENST00000232888 PTPRQQ9UMZ3 2332 aa20.59■□□□□ 0.89
RRP9-201ENST00000232888 GTF3C1Q12789 2109 aa20.58■□□□□ 0.89
RRP9-201ENST00000232888 C1QTNF9BB2RNN3 333 aa20.58■□□□□ 0.88
RRP9-201ENST00000232888 NRASP01111 189 aa20.58■□□□□ 0.88
RRP9-201ENST00000232888 C1QTNF9P0C862 333 aa20.58■□□□□ 0.88
RRP9-201ENST00000232888 CCBE1Q6UXH8 406 aaPredicted RBP20.58■□□□□ 0.88
RRP9-201ENST00000232888 DNM1P46Q6ZS02 220 aa20.58■□□□□ 0.88
RRP9-201ENST00000232888 CXorf67Q86X51 503 aaPredicted RBP20.58■□□□□ 0.88
RRP9-201ENST00000232888 DOLPP1Q86YN1 238 aa20.58■□□□□ 0.88
RRP9-201ENST00000232888 FAM169BQ8N8A8 192 aa20.58■□□□□ 0.88
RRP9-201ENST00000232888 WDR31Q8NA23 367 aa20.58■□□□□ 0.88
RRP9-201ENST00000232888 CSNK2A3Q8NEV1 391 aa20.58■□□□□ 0.88
RRP9-201ENST00000232888 KCNG3Q8TAE7 436 aa20.58■□□□□ 0.88
RRP9-201ENST00000232888 ZC3HAV1LQ96H79 300 aaKnown RBP20.58■□□□□ 0.88
RRP9-201ENST00000232888 C11orf54Q9H0W9 315 aaPredicted RBP20.58■□□□□ 0.88
RRP9-201ENST00000232888 EIF3KQ9UBQ5 218 aaKnown RBP20.58■□□□□ 0.88
RRP9-201ENST00000232888 TMEM14DPA8MWL7 114 aa20.57■□□□□ 0.88
RRP9-201ENST00000232888 LYRM1O43325 122 aa20.57■□□□□ 0.88
RRP9-201ENST00000232888 VSIG8P0DPA2 414 aa20.57■□□□□ 0.88
RRP9-201ENST00000232888 CCL2P13500 99 aa20.57■□□□□ 0.88
RRP9-201ENST00000232888 OPRM1P35372 400 aa20.57■□□□□ 0.88
RRP9-201ENST00000232888 PTGFRP43088 359 aa20.57■□□□□ 0.88
RRP9-201ENST00000232888 RFX2P48378 723 aa20.57■□□□□ 0.88
RRP9-201ENST00000232888 DGCR2P98153 550 aa20.57■□□□□ 0.88
RRP9-201ENST00000232888 GK2Q14410 553 aaPredicted RBP20.57■□□□□ 0.88
RRP9-201ENST00000232888 GLIPR1L1Q6UWM5 242 aa20.57■□□□□ 0.88
RRP9-201ENST00000232888 BHLHA15Q7RTS1 189 aaPredicted RBP20.57■□□□□ 0.88
RRP9-201ENST00000232888 NRARPQ7Z6K4 114 aa20.57■□□□□ 0.88
RRP9-201ENST00000232888 FTMTQ8N4E7 242 aa20.57■□□□□ 0.88
RRP9-201ENST00000232888 NAXEQ8NCW5 288 aa20.57■□□□□ 0.88
RRP9-201ENST00000232888 C7orf50Q9BRJ6 194 aaKnown RBP20.57■□□□□ 0.88
RRP9-201ENST00000232888 PIGMQ9H3S5 423 aa20.57■□□□□ 0.88
RRP9-201ENST00000232888 RBFOX1Q9NWB1 397 aaKnown RBP20.57■□□□□ 0.88
RRP9-201ENST00000232888 AMDHD2Q9Y303 409 aa20.57■□□□□ 0.88
RRP9-201ENST00000232888 STARD10Q9Y365 291 aa20.57■□□□□ 0.88
RRP9-201ENST00000232888 CFAP47Q6ZTR5 3102 aa20.56■□□□□ 0.88
RRP9-201ENST00000232888 hCG_2014768A0A024R1R8 64 aa20.56■□□□□ 0.88
RRP9-201ENST00000232888 NAT2P11245 290 aa20.56■□□□□ 0.88
RRP9-201ENST00000232888 PMPCAQ10713 525 aa20.56■□□□□ 0.88
RRP9-201ENST00000232888 KLRB1Q12918 225 aa20.56■□□□□ 0.88
RRP9-201ENST00000232888 LHFPL2Q6ZUX7 228 aa20.56■□□□□ 0.88
RRP9-201ENST00000232888 CDH24Q86UP0 819 aa20.56■□□□□ 0.88
RRP9-201ENST00000232888 TOMM5Q8N4H5 51 aa20.56■□□□□ 0.88
RRP9-201ENST00000232888 ZCCHC14Q8WYQ9 949 aaKnown RBP20.56■□□□□ 0.88
RRP9-201ENST00000232888 FAM46BQ96A09 425 aa20.56■□□□□ 0.88
RRP9-201ENST00000232888 MS4A3Q96HJ5 214 aa20.56■□□□□ 0.88
RRP9-201ENST00000232888 NKX3-1Q99801 234 aaPredicted RBP20.56■□□□□ 0.88
RRP9-201ENST00000232888 CDH20Q9HBT6 801 aa20.56■□□□□ 0.88
RRP9-201ENST00000232888 GPR173Q9NS66 373 aa20.56■□□□□ 0.88
RRP9-201ENST00000232888 SLC7A11Q9UPY5 501 aa20.56■□□□□ 0.88
RRP9-201ENST00000232888 PIEZO1Q92508 2521 aa20.56■□□□□ 0.88
RRP9-201ENST00000232888 LINC00854A0A1B0GVQ3 168 aa20.55■□□□□ 0.88
RRP9-201ENST00000232888 CENPXA8MT69 81 aa20.55■□□□□ 0.88
RRP9-201ENST00000232888 MSTNO14793 375 aa20.55■□□□□ 0.88
RRP9-201ENST00000232888 LANCL1O43813 399 aa20.55■□□□□ 0.88
RRP9-201ENST00000232888 ECDO95905 644 aaPredicted RBP20.55■□□□□ 0.88
RRP9-201ENST00000232888 IGKV3-15P01624 115 aa20.55■□□□□ 0.88
RRP9-201ENST00000232888 WNT5AP41221 380 aa20.55■□□□□ 0.88
RRP9-201ENST00000232888 AP3S2P59780 193 aa20.55■□□□□ 0.88
RRP9-201ENST00000232888 DYRK1AQ13627 763 aa20.55■□□□□ 0.88
RRP9-201ENST00000232888 ZNF101Q8IZC7 436 aa20.55■□□□□ 0.88
RRP9-201ENST00000232888 PAQR4Q8N4S7 273 aaPredicted RBP20.55■□□□□ 0.88
RRP9-201ENST00000232888 UBASH3BQ8TF42 649 aa20.55■□□□□ 0.88
RRP9-201ENST00000232888 SPACA5Q96QH8 159 aa20.55■□□□□ 0.88
RRP9-201ENST00000232888 KCNK15Q9H427 330 aa20.55■□□□□ 0.88
RRP9-201ENST00000232888 ASF1BQ9NVP2 202 aa20.55■□□□□ 0.88
RRP9-201ENST00000232888 RBMX2Q9Y388 322 aaKnown RBP20.55■□□□□ 0.88
RRP9-201ENST00000232888 TMEM8BA6NDV4 472 aa20.55■□□□□ 0.88
RRP9-201ENST00000232888 OR5H1A6NKK0 313 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms