RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 OR5M8Q8NGP6 311 aa8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 OR8U1Q8NH10 309 aa8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 ZNF519Q8TB69 540 aa8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 ZNF721Q8TF20 911 aa8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 SEC61A2Q9H9S3 476 aa8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 SEBOXQ9HB31 216 aaPredicted RBP8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 CABIN1Q9Y6J0 2220 aa8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 TRAV36DV7A0A075B6V5 113 aa8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 A0A087WZY1 265 aa8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 UMAD1C9J7I0 102 aa8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 H0YIG0 161 aa8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 IGKV3-11P04433 115 aa8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 TAS2R19P59542 299 aa8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 RNASE10Q5GAN6 216 aaKnown RBP8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 FDX2Q6P4F2 183 aa8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 CATSPERDQ86XM0 798 aa8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 C9orf40Q8IXQ3 194 aa8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 SLC46A1Q96NT5 459 aa8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 PHB2Q99623 299 aa8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 S1PR5Q9H228 398 aa8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 C1orf198Q9H425 327 aa8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 DOK5Q9P104 306 aa8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 CD207Q9UJ71 328 aa8.37□□□□□ -1.07
HLA-DOA-201ENST00000229829 MSGN1A6NI15 193 aa8.36□□□□□ -1.07
HLA-DOA-201ENST00000229829 HOXB5P09067 269 aa8.36□□□□□ -1.07
HLA-DOA-201ENST00000229829 SPCS3P61009 180 aa8.36□□□□□ -1.07
HLA-DOA-201ENST00000229829 RPL7L1Q6DKI1 246 aaKnown RBP8.36□□□□□ -1.07
HLA-DOA-201ENST00000229829 REC114Q7Z4M0 266 aa8.36□□□□□ -1.07
HLA-DOA-201ENST00000229829 BHLHE23Q8NDY6 225 aa8.36□□□□□ -1.07
HLA-DOA-201ENST00000229829 PIK3IP1Q96FE7 263 aa8.36□□□□□ -1.07
HLA-DOA-201ENST00000229829 ZNF587Q96SQ5 575 aaPredicted RBP8.36□□□□□ -1.07
HLA-DOA-201ENST00000229829 OCSTAMPQ9BR26 566 aa8.36□□□□□ -1.07
HLA-DOA-201ENST00000229829 MESP1Q9BRJ9 268 aa8.36□□□□□ -1.07
HLA-DOA-201ENST00000229829 CST11Q9H112 138 aa8.36□□□□□ -1.07
HLA-DOA-201ENST00000229829 KCNJ16Q9NPI9 418 aa8.36□□□□□ -1.07
HLA-DOA-201ENST00000229829 TMED7-TICAM2A0A0A6YYA0 188 aa8.36□□□□□ -1.07
HLA-DOA-201ENST00000229829 IGKV1D-43A0A0B4J1Z2 117 aa8.36□□□□□ -1.07
HLA-DOA-201ENST00000229829 ADAP1O75689 374 aa8.36□□□□□ -1.07
HLA-DOA-201ENST00000229829 COX5BP10606 129 aa8.36□□□□□ -1.07
HLA-DOA-201ENST00000229829 IGFBP3P17936 291 aaPredicted RBP8.36□□□□□ -1.07
HLA-DOA-201ENST00000229829 CFPP27918 469 aa8.36□□□□□ -1.07
HLA-DOA-201ENST00000229829 PSMB6P28072 239 aa8.36□□□□□ -1.07
HLA-DOA-201ENST00000229829 IL12BP29460 328 aa8.36□□□□□ -1.07
HLA-DOA-201ENST00000229829 SULT1A1P50225 295 aa8.36□□□□□ -1.07
HLA-DOA-201ENST00000229829 ACTBP60709 375 aa8.36□□□□□ -1.07
HLA-DOA-201ENST00000229829 ACTG1P63261 375 aa8.36□□□□□ -1.07
HLA-DOA-201ENST00000229829 MRPS21P82921 87 aaKnown RBP8.36□□□□□ -1.07
HLA-DOA-201ENST00000229829 PMPCAQ10713 525 aa8.36□□□□□ -1.07
HLA-DOA-201ENST00000229829 MPPED2Q15777 294 aa8.36□□□□□ -1.07
HLA-DOA-201ENST00000229829 MAMDC2Q7Z304 686 aaPredicted RBP8.36□□□□□ -1.07
HLA-DOA-201ENST00000229829 ZNF584Q8IVC4 421 aa8.36□□□□□ -1.07
HLA-DOA-201ENST00000229829 MRGPRFQ96AM1 343 aa8.36□□□□□ -1.07
HLA-DOA-201ENST00000229829 SOX7Q9BT81 388 aa8.36□□□□□ -1.07
HLA-DOA-201ENST00000229829 VSIG4Q9Y279 399 aa8.36□□□□□ -1.07
HLA-DOA-201ENST00000229829 TMED7Q9Y3B3 224 aa8.36□□□□□ -1.07
HLA-DOA-201ENST00000229829 CBY1Q9Y3M2 126 aa8.36□□□□□ -1.07
HLA-DOA-201ENST00000229829 FRG2CA6NGY1 282 aa8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 SOX1O00570 391 aaPredicted RBP8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 EIF1AYO14602 144 aaKnown RBP8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 DRD1P21728 446 aa8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 ROM1Q03395 351 aa8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 SGCBQ16585 318 aa8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 ZNF343Q6P1L6 599 aa8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 RNF144BQ7Z419 303 aa8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 TMEM229BQ8NBD8 167 aa8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 OR13C3Q8NGS6 347 aa8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 TBL1XR1Q9BZK7 514 aa8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 ALX4Q9H161 411 aaPredicted RBP8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 C8orf33Q9H7E9 229 aaPredicted RBP8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 PHF3Q92576 2039 aaKnown RBP8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 FER1L5A0AVI2 2057 aa8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 LOC107986453A0A1B0GWG9 222 aa8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 P2RY10O00398 339 aa8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 ZNF354AO60765 605 aaPredicted RBP8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 SCAF4O95104 1147 aaKnown RBP8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 ERCC1P07992 297 aaPredicted RBP8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 DCDP81605 110 aaKnown RBP8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 NSUN5P2Q63ZY6 315 aa8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 KIAA0895LQ68EN5 471 aa8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 ETFRF1Q6IPR1 90 aa8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 TCEAL6Q6IPX3 200 aa8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 SHISA6Q6ZSJ9 500 aa8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 DCXRQ7Z4W1 244 aa8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 DTD1Q8TEA8 209 aa8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 NUDCD2Q8WVJ2 157 aa8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 KLHDC7BQ96G42 594 aa8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 DUSP15Q9H1R2 295 aaPredicted RBP8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 TXNIPQ9H3M7 391 aa8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 CKLFQ9UBR5 152 aa8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 LPAR3Q9UBY5 353 aa8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 IL17BQ9UHF5 180 aa8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 CPAMD8Q8IZJ3 1885 aa8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 DMDP11532 3685 aa8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 ABCA7Q8IZY2 2146 aa8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 TMEM150CB9EJG8 249 aa8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 NPIPB7O75200 414 aa8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 CNOT4O95628 575 aaKnown RBP8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 GP1BBP13224 206 aa8.35□□□□□ -1.07
HLA-DOA-201ENST00000229829 HTR5AP47898 357 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms