RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 CHST5Q9GZS9 411 aa12.01□□□□□ -0.49
SEC61B-201ENST00000223641 CISD1Q9NZ45 108 aaKnown RBP12.01□□□□□ -0.49
SEC61B-201ENST00000223641 MRPL15Q9P015 296 aaKnown RBP12.01□□□□□ -0.49
SEC61B-201ENST00000223641 POU2F3Q9UKI9 436 aa12.01□□□□□ -0.49
SEC61B-201ENST00000223641 FZR1Q9UM11 496 aa12.01□□□□□ -0.49
SEC61B-201ENST00000223641 FOXJ3Q9UPW0 622 aa12.01□□□□□ -0.49
SEC61B-201ENST00000223641 GSTK1Q9Y2Q3 226 aa12.01□□□□□ -0.49
SEC61B-201ENST00000223641 USP9YO00507 2555 aaPredicted RBP12.01□□□□□ -0.49
SEC61B-201ENST00000223641 GCN1Q92616 2671 aaKnown RBP12□□□□□ -0.49
SEC61B-201ENST00000223641 TRAV1-2A0A0B4J238 106 aa12□□□□□ -0.49
SEC61B-201ENST00000223641 A6NIN4 97 aa12□□□□□ -0.49
SEC61B-201ENST00000223641 VSTM5A8MXK1 200 aa12□□□□□ -0.49
SEC61B-201ENST00000223641 CTAG2O75638 210 aa12□□□□□ -0.49
SEC61B-201ENST00000223641 OR4A8P0C604 315 aa12□□□□□ -0.49
SEC61B-201ENST00000223641 MMP15P51511 669 aa12□□□□□ -0.49
SEC61B-201ENST00000223641 KLF3P57682 345 aaPredicted RBP12□□□□□ -0.49
SEC61B-201ENST00000223641 EFNB3Q15768 340 aa12□□□□□ -0.49
SEC61B-201ENST00000223641 HSD17B12Q53GQ0 312 aa12□□□□□ -0.49
SEC61B-201ENST00000223641 C22orf42Q6IC83 251 aa12□□□□□ -0.49
SEC61B-201ENST00000223641 VHLLQ6RSH7 139 aa12□□□□□ -0.49
SEC61B-201ENST00000223641 FTMTQ8N4E7 242 aa12□□□□□ -0.49
SEC61B-201ENST00000223641 OR8G5Q8NG78 346 aa12□□□□□ -0.49
SEC61B-201ENST00000223641 OR5D14Q8NGL3 314 aa12□□□□□ -0.49
SEC61B-201ENST00000223641 UBASH3BQ8TF42 649 aa12□□□□□ -0.49
SEC61B-201ENST00000223641 PIGTQ969N2 578 aa12□□□□□ -0.49
SEC61B-201ENST00000223641 ORAI1Q96D31 301 aa12□□□□□ -0.49
SEC61B-201ENST00000223641 SLC30A2Q9BRI3 323 aa12□□□□□ -0.49
SEC61B-201ENST00000223641 ZCCHC4Q9H5U6 513 aa12□□□□□ -0.49
SEC61B-201ENST00000223641 RNF167Q9H6Y7 350 aa12□□□□□ -0.49
SEC61B-201ENST00000223641 PLEKHA1Q9HB21 404 aa12□□□□□ -0.49
SEC61B-201ENST00000223641 EXOSC4Q9NPD3 245 aaKnown RBP12□□□□□ -0.49
SEC61B-201ENST00000223641 MYEF2Q9P2K5 600 aaKnown RBP12□□□□□ -0.49
SEC61B-201ENST00000223641 RHBDD3Q9Y3P4 386 aa12□□□□□ -0.49
SEC61B-201ENST00000223641 ABCA4P78363 2273 aa11.99□□□□□ -0.49
SEC61B-201ENST00000223641 ICE1Q9Y2F5 2266 aa11.99□□□□□ -0.49
SEC61B-201ENST00000223641 SPTAN1Q13813 2472 aaKnown RBP11.99□□□□□ -0.49
SEC61B-201ENST00000223641 DCHS2Q6V1P9 2916 aa11.99□□□□□ -0.49
SEC61B-201ENST00000223641 TRAV8-7A0A075B6U6 113 aa11.99□□□□□ -0.49
SEC61B-201ENST00000223641 LOC100506127A0A0U1RQW1 187 aa11.99□□□□□ -0.49
SEC61B-201ENST00000223641 A0A1W2PPK0 400 aa11.99□□□□□ -0.49
SEC61B-201ENST00000223641 SHISA3A0PJX4 238 aa11.99□□□□□ -0.49
SEC61B-201ENST00000223641 ANKRD61A6NGH8 418 aa11.99□□□□□ -0.49
SEC61B-201ENST00000223641 TRIM64BA6NI03 449 aa11.99□□□□□ -0.49
SEC61B-201ENST00000223641 GMDSO60547 372 aa11.99□□□□□ -0.49
SEC61B-201ENST00000223641 CD37P11049 281 aa11.99□□□□□ -0.49
SEC61B-201ENST00000223641 SRMP19623 302 aa11.99□□□□□ -0.49
SEC61B-201ENST00000223641 SERPINF1P36955 418 aa11.99□□□□□ -0.49
SEC61B-201ENST00000223641 UBE2V2Q15819 145 aa11.99□□□□□ -0.49
SEC61B-201ENST00000223641 MST1LQ2TV78 715 aa11.99□□□□□ -0.49
SEC61B-201ENST00000223641 CLVS2Q5SYC1 327 aa11.99□□□□□ -0.49
SEC61B-201ENST00000223641 FOXB2Q5VYV0 432 aa11.99□□□□□ -0.49
SEC61B-201ENST00000223641 ISOC1Q96CN7 298 aa11.99□□□□□ -0.49
SEC61B-201ENST00000223641 KCTD7Q96MP8 289 aa11.99□□□□□ -0.49
SEC61B-201ENST00000223641 PLK3Q9H4B4 646 aa11.99□□□□□ -0.49
SEC61B-201ENST00000223641 CGGBP1Q9UFW8 167 aaPredicted RBP11.99□□□□□ -0.49
SEC61B-201ENST00000223641 DUSP13Q9UII6 198 aa11.99□□□□□ -0.49
SEC61B-201ENST00000223641 MPC1Q9Y5U8 109 aa11.99□□□□□ -0.49
SEC61B-201ENST00000223641 PKDREJQ9NTG1 2253 aa11.98□□□□□ -0.49
SEC61B-201ENST00000223641 IGKV1-9A0A0C4DH69 117 aa11.98□□□□□ -0.49
SEC61B-201ENST00000223641 HS3ST1O14792 307 aa11.98□□□□□ -0.49
SEC61B-201ENST00000223641 NRASP01111 189 aa11.98□□□□□ -0.49
SEC61B-201ENST00000223641 COX6B1P14854 86 aa11.98□□□□□ -0.49
SEC61B-201ENST00000223641 ZNF20P17024 532 aa11.98□□□□□ -0.49
SEC61B-201ENST00000223641 CALRP27797 417 aaKnown RBP11.98□□□□□ -0.49
SEC61B-201ENST00000223641 TGFBR1P36897 503 aa11.98□□□□□ -0.49
SEC61B-201ENST00000223641 MTNR1BP49286 362 aa11.98□□□□□ -0.49
SEC61B-201ENST00000223641 SELENOVP59797 346 aa11.98□□□□□ -0.49
SEC61B-201ENST00000223641 NCS1P62166 190 aa11.98□□□□□ -0.49
SEC61B-201ENST00000223641 LSM3P62310 102 aaKnown RBP11.98□□□□□ -0.49
SEC61B-201ENST00000223641 TLE4Q04727 773 aa11.98□□□□□ -0.49
SEC61B-201ENST00000223641 MOGQ16653 247 aa11.98□□□□□ -0.49
SEC61B-201ENST00000223641 SWI5Q1ZZU3 235 aa11.98□□□□□ -0.49
SEC61B-201ENST00000223641 Q6ZR03 302 aa11.98□□□□□ -0.49
SEC61B-201ENST00000223641 LRRTM1Q86UE6 522 aa11.98□□□□□ -0.49
SEC61B-201ENST00000223641 LYPD6Q86Y78 171 aa11.98□□□□□ -0.49
SEC61B-201ENST00000223641 ZNF295-AS1Q8N0V1 137 aa11.98□□□□□ -0.49
SEC61B-201ENST00000223641 OR5AS1Q8N127 324 aa11.98□□□□□ -0.49
SEC61B-201ENST00000223641 BHLHE23Q8NDY6 225 aa11.98□□□□□ -0.49
SEC61B-201ENST00000223641 PIGCQ92535 297 aa11.98□□□□□ -0.49
SEC61B-201ENST00000223641 DGCR14Q96DF8 476 aaKnown RBP11.98□□□□□ -0.49
SEC61B-201ENST00000223641 TECTBQ96PL2 329 aa11.98□□□□□ -0.49
SEC61B-201ENST00000223641 SYT3Q9BQG1 590 aa11.98□□□□□ -0.49
SEC61B-201ENST00000223641 SLC22A4Q9H015 551 aa11.98□□□□□ -0.49
SEC61B-201ENST00000223641 PPP1R3EQ9H7J1 279 aa11.98□□□□□ -0.49
SEC61B-201ENST00000223641 TAS2R4Q9NYW5 299 aa11.98□□□□□ -0.49
SEC61B-201ENST00000223641 ROS1P08922 2347 aa11.98□□□□□ -0.49
SEC61B-201ENST00000223641 ANKRD30BLA7E2S9 258 aa11.97□□□□□ -0.49
SEC61B-201ENST00000223641 ZNF850A8MQ14 1090 aa11.97□□□□□ -0.49
SEC61B-201ENST00000223641 B9A039 149 aa11.97□□□□□ -0.49
SEC61B-201ENST00000223641 H3BMQ9 156 aa11.97□□□□□ -0.49
SEC61B-201ENST00000223641 MLNRO43193 412 aa11.97□□□□□ -0.49
SEC61B-201ENST00000223641 SULT1B1O43704 296 aa11.97□□□□□ -0.49
SEC61B-201ENST00000223641 TIMM8AO60220 97 aaPredicted RBP11.97□□□□□ -0.49
SEC61B-201ENST00000223641 ALDOBP05062 364 aa11.97□□□□□ -0.49
SEC61B-201ENST00000223641 DANCRP0C864 163 aa11.97□□□□□ -0.49
SEC61B-201ENST00000223641 PRF1P14222 555 aa11.97□□□□□ -0.49
SEC61B-201ENST00000223641 ADRA2CP18825 462 aa11.97□□□□□ -0.49
SEC61B-201ENST00000223641 ATF1P18846 271 aa11.97□□□□□ -0.49
SEC61B-201ENST00000223641 GNALP38405 381 aa11.97□□□□□ -0.49
SEC61B-201ENST00000223641 VBP1P61758 197 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms