RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 GPR160Q9UJ42 338 aa23.25■■□□□ 1.31
CHMP4B-201ENST00000217402 TRBV5-5A0A0J9YX44 114 aa23.24■■□□□ 1.31
CHMP4B-201ENST00000217402 DHRS7CA6NNS2 312 aa23.24■■□□□ 1.31
CHMP4B-201ENST00000217402 TFAP2AP05549 437 aa23.24■■□□□ 1.31
CHMP4B-201ENST00000217402 CD53P19397 219 aa23.24■■□□□ 1.31
CHMP4B-201ENST00000217402 Q499Y3 187 aa23.24■■□□□ 1.31
CHMP4B-201ENST00000217402 C11orf71Q6IPW1 123 aa23.24■■□□□ 1.31
CHMP4B-201ENST00000217402 TMEM106AQ96A25 262 aa23.24■■□□□ 1.31
CHMP4B-201ENST00000217402 SLC30A2Q9BRI3 323 aa23.24■■□□□ 1.31
CHMP4B-201ENST00000217402 HLA-DPB1P04440 258 aa23.23■■□□□ 1.31
CHMP4B-201ENST00000217402 GNALP38405 381 aa23.23■■□□□ 1.31
CHMP4B-201ENST00000217402 ZNF81P51508 661 aa23.23■■□□□ 1.31
CHMP4B-201ENST00000217402 DMRTC1Q5HYR2 192 aa23.23■■□□□ 1.31
CHMP4B-201ENST00000217402 ZCCHC24Q8N2G6 241 aaKnown RBP23.23■■□□□ 1.31
CHMP4B-201ENST00000217402 OR10AD1Q8NGE0 317 aa23.23■■□□□ 1.31
CHMP4B-201ENST00000217402 TMIGD2Q96BF3 282 aa23.23■■□□□ 1.31
CHMP4B-201ENST00000217402 TMEM100Q9NV29 134 aa23.23■■□□□ 1.31
CHMP4B-201ENST00000217402 CGGBP1Q9UFW8 167 aaPredicted RBP23.23■■□□□ 1.31
CHMP4B-201ENST00000217402 A0A1W2PPK0 400 aa23.22■■□□□ 1.31
CHMP4B-201ENST00000217402 ZNF850A8MQ14 1090 aa23.22■■□□□ 1.31
CHMP4B-201ENST00000217402 ZNF879B4DU55 563 aa23.22■■□□□ 1.31
CHMP4B-201ENST00000217402 SPRY3O43610 288 aa23.22■■□□□ 1.31
CHMP4B-201ENST00000217402 CD36P16671 472 aa23.22■■□□□ 1.31
CHMP4B-201ENST00000217402 TGFBR2P37173 567 aa23.22■■□□□ 1.31
CHMP4B-201ENST00000217402 PRDX4Q13162 271 aa23.22■■□□□ 1.31
CHMP4B-201ENST00000217402 ACSM3Q53FZ2 586 aa23.22■■□□□ 1.31
CHMP4B-201ENST00000217402 ZBTB37Q5TC79 503 aa23.22■■□□□ 1.31
CHMP4B-201ENST00000217402 ORAI1Q96D31 301 aa23.22■■□□□ 1.31
CHMP4B-201ENST00000217402 ADAT1Q9BUB4 502 aaKnown RBP23.22■■□□□ 1.31
CHMP4B-201ENST00000217402 TPK1Q9H3S4 243 aa23.22■■□□□ 1.31
CHMP4B-201ENST00000217402 CYSLTR2Q9NS75 346 aa23.22■■□□□ 1.31
CHMP4B-201ENST00000217402 H0YL77 283 aa23.22■■□□□ 1.31
CHMP4B-201ENST00000217402 RGS9O75916 674 aaPredicted RBP23.22■■□□□ 1.31
CHMP4B-201ENST00000217402 CD2P06729 351 aa23.22■■□□□ 1.31
CHMP4B-201ENST00000217402 FABP5Q01469 135 aa23.22■■□□□ 1.31
CHMP4B-201ENST00000217402 TRAM1Q15629 374 aa23.22■■□□□ 1.31
CHMP4B-201ENST00000217402 ZMAT1Q5H9K5 638 aa23.22■■□□□ 1.31
CHMP4B-201ENST00000217402 OR2Z1Q8NG97 314 aa23.22■■□□□ 1.31
CHMP4B-201ENST00000217402 OR13G1Q8NGZ3 307 aa23.22■■□□□ 1.31
CHMP4B-201ENST00000217402 CCL19Q99731 98 aa23.22■■□□□ 1.31
CHMP4B-201ENST00000217402 CACNG6Q9BXT2 260 aa23.22■■□□□ 1.31
CHMP4B-201ENST00000217402 GPR173Q9NS66 373 aa23.22■■□□□ 1.31
CHMP4B-201ENST00000217402 NBPF19A0A087WUL8 3843 aa23.21■■□□□ 1.31
CHMP4B-201ENST00000217402 SERPINA3P01011 423 aa23.21■■□□□ 1.31
CHMP4B-201ENST00000217402 CST4P01036 141 aa23.21■■□□□ 1.31
CHMP4B-201ENST00000217402 PSMA1P25786 263 aaKnown RBP23.21■■□□□ 1.31
CHMP4B-201ENST00000217402 CEP78Q5JTW2 689 aa23.21■■□□□ 1.31
CHMP4B-201ENST00000217402 CLVS2Q5SYC1 327 aa23.21■■□□□ 1.31
CHMP4B-201ENST00000217402 ITFG2Q969R8 447 aa23.21■■□□□ 1.31
CHMP4B-201ENST00000217402 ANKRD61A6NGH8 418 aa23.2■■□□□ 1.3
CHMP4B-201ENST00000217402 MLNRO43193 412 aa23.2■■□□□ 1.3
CHMP4B-201ENST00000217402 ALDH3B2P48448 385 aa23.2■■□□□ 1.3
CHMP4B-201ENST00000217402 OR8G1Q15617 311 aa23.2■■□□□ 1.3
CHMP4B-201ENST00000217402 TMEM91Q6ZNR0 172 aa23.2■■□□□ 1.3
CHMP4B-201ENST00000217402 CEACAM19Q7Z692 300 aa23.2■■□□□ 1.3
CHMP4B-201ENST00000217402 OR13F1Q8NGS4 319 aa23.2■■□□□ 1.3
CHMP4B-201ENST00000217402 UBASH3BQ8TF42 649 aa23.2■■□□□ 1.3
CHMP4B-201ENST00000217402 PIGTQ969N2 578 aa23.2■■□□□ 1.3
CHMP4B-201ENST00000217402 C10orf35Q96D05 121 aa23.2■■□□□ 1.3
CHMP4B-201ENST00000217402 DERL3Q96Q80 235 aa23.2■■□□□ 1.3
CHMP4B-201ENST00000217402 VRK1Q99986 396 aaPredicted RBP23.2■■□□□ 1.3
CHMP4B-201ENST00000217402 CHST5Q9GZS9 411 aa23.2■■□□□ 1.3
CHMP4B-201ENST00000217402 AKAP6Q13023 2319 aa23.2■■□□□ 1.3
CHMP4B-201ENST00000217402 GABRPO00591 440 aa23.19■■□□□ 1.3
CHMP4B-201ENST00000217402 GMDSO60547 372 aa23.19■■□□□ 1.3
CHMP4B-201ENST00000217402 NRASP01111 189 aa23.19■■□□□ 1.3
CHMP4B-201ENST00000217402 BMP4P12644 408 aa23.19■■□□□ 1.3
CHMP4B-201ENST00000217402 CDKN1AP38936 164 aa23.19■■□□□ 1.3
CHMP4B-201ENST00000217402 FAM27D1Q5T7N8 215 aa23.19■■□□□ 1.3
CHMP4B-201ENST00000217402 PLCXD3Q63HM9 321 aa23.19■■□□□ 1.3
CHMP4B-201ENST00000217402 ZDHHC23Q8IYP9 409 aa23.19■■□□□ 1.3
CHMP4B-201ENST00000217402 PP6455Q8WZ26 134 aa23.19■■□□□ 1.3
CHMP4B-201ENST00000217402 ELMOD3Q96FG2 381 aa23.19■■□□□ 1.3
CHMP4B-201ENST00000217402 NOX4Q9NPH5 578 aa23.19■■□□□ 1.3
CHMP4B-201ENST00000217402 TAS2R4Q9NYW5 299 aa23.19■■□□□ 1.3
CHMP4B-201ENST00000217402 PMF1-BGLAPU3KQ54 211 aa23.19■■□□□ 1.3
CHMP4B-201ENST00000217402 C17orf100A8MU93 164 aa23.19■■□□□ 1.3
CHMP4B-201ENST00000217402 SC5DO75845 299 aa23.19■■□□□ 1.3
CHMP4B-201ENST00000217402 IGHV1-46P01743 117 aa23.19■■□□□ 1.3
CHMP4B-201ENST00000217402 MAPK3P27361 379 aaPredicted RBP23.19■■□□□ 1.3
CHMP4B-201ENST00000217402 TMEM42Q69YG0 159 aa23.19■■□□□ 1.3
CHMP4B-201ENST00000217402 MOB3CQ70IA8 216 aa23.19■■□□□ 1.3
CHMP4B-201ENST00000217402 SERPINA12Q8IW75 414 aa23.19■■□□□ 1.3
CHMP4B-201ENST00000217402 PARP16Q8N5Y8 322 aa23.19■■□□□ 1.3
CHMP4B-201ENST00000217402 OR13C9Q8NGT0 318 aa23.19■■□□□ 1.3
CHMP4B-201ENST00000217402 OR8S1Q8NH09 359 aa23.19■■□□□ 1.3
CHMP4B-201ENST00000217402 YIPF6Q96EC8 236 aa23.19■■□□□ 1.3
CHMP4B-201ENST00000217402 SLC22A4Q9H015 551 aa23.19■■□□□ 1.3
CHMP4B-201ENST00000217402 MS4A5Q9H3V2 200 aa23.19■■□□□ 1.3
CHMP4B-201ENST00000217402 EXOSC4Q9NPD3 245 aaKnown RBP23.19■■□□□ 1.3
CHMP4B-201ENST00000217402 STUB1Q9UNE7 303 aa23.19■■□□□ 1.3
CHMP4B-201ENST00000217402 MPC1Q9Y5U8 109 aa23.19■■□□□ 1.3
CHMP4B-201ENST00000217402 TACC2O95359 2948 aa23.18■■□□□ 1.3
CHMP4B-201ENST00000217402 TRBV5-7A0A0A0MS05 114 aa23.18■■□□□ 1.3
CHMP4B-201ENST00000217402 F5H5P2 479 aa23.18■■□□□ 1.3
CHMP4B-201ENST00000217402 GADD45AP24522 165 aa23.18■■□□□ 1.3
CHMP4B-201ENST00000217402 RPL5P46777 297 aaKnown RBP23.18■■□□□ 1.3
CHMP4B-201ENST00000217402 PPOXP50336 477 aa23.18■■□□□ 1.3
CHMP4B-201ENST00000217402 PAMR1Q6UXH9 720 aa23.18■■□□□ 1.3
CHMP4B-201ENST00000217402 NPRL2Q8WTW4 380 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms