RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 SLC25A28Q96A46 364 aa12.5□□□□□ -0.41
UPK3A-201ENST00000216211 ZNF799Q96GE5 643 aa12.5□□□□□ -0.41
UPK3A-201ENST00000216211 NDUFA13Q9P0J0 144 aa12.5□□□□□ -0.41
UPK3A-201ENST00000216211 KCNG2Q9UJ96 466 aa12.5□□□□□ -0.41
UPK3A-201ENST00000216211 BLOC1S6Q9UL45 172 aa12.5□□□□□ -0.41
UPK3A-201ENST00000216211 CDH10Q9Y6N8 788 aa12.5□□□□□ -0.41
UPK3A-201ENST00000216211 C5orf63A6NC05 138 aa12.49□□□□□ -0.41
UPK3A-201ENST00000216211 BHLHE40O14503 412 aa12.49□□□□□ -0.41
UPK3A-201ENST00000216211 ALDH3B2P48448 385 aa12.49□□□□□ -0.41
UPK3A-201ENST00000216211 FGF12P61328 243 aa12.49□□□□□ -0.41
UPK3A-201ENST00000216211 CSNK2BP67870 215 aa12.49□□□□□ -0.41
UPK3A-201ENST00000216211 ZNF92Q03936 586 aa12.49□□□□□ -0.41
UPK3A-201ENST00000216211 PTGES3Q15185 160 aaKnown RBP12.49□□□□□ -0.41
UPK3A-201ENST00000216211 SHISA2Q6UWI4 295 aa12.49□□□□□ -0.41
UPK3A-201ENST00000216211 BRD3OSQ6XYD6 125 aa12.49□□□□□ -0.41
UPK3A-201ENST00000216211 BOLLQ8N9W6 283 aaKnown RBP12.49□□□□□ -0.41
UPK3A-201ENST00000216211 OR51L1Q8NGJ5 315 aa12.49□□□□□ -0.41
UPK3A-201ENST00000216211 DDOQ99489 341 aa12.49□□□□□ -0.41
UPK3A-201ENST00000216211 ADAT1Q9BUB4 502 aaKnown RBP12.49□□□□□ -0.41
UPK3A-201ENST00000216211 UNKLQ9H9P5 680 aaKnown RBP12.49□□□□□ -0.41
UPK3A-201ENST00000216211 MGAM2Q2M2H8 2515 aa12.48□□□□□ -0.41
UPK3A-201ENST00000216211 SMIM31A0A1B0GVY4 71 aa12.48□□□□□ -0.41
UPK3A-201ENST00000216211 GGT3PA6NGU5 568 aa12.48□□□□□ -0.41
UPK3A-201ENST00000216211 CD300LBA8K4G0 201 aa12.48□□□□□ -0.41
UPK3A-201ENST00000216211 C22orf46C9J442 243 aa12.48□□□□□ -0.41
UPK3A-201ENST00000216211 CLDN34H7C241 214 aa12.48□□□□□ -0.41
UPK3A-201ENST00000216211 SLC1A7O00341 560 aa12.48□□□□□ -0.41
UPK3A-201ENST00000216211 PHYHO14832 338 aa12.48□□□□□ -0.41
UPK3A-201ENST00000216211 GLYATL3Q5SZD4 288 aa12.48□□□□□ -0.41
UPK3A-201ENST00000216211 ZNF362Q5T0B9 420 aaPredicted RBP12.48□□□□□ -0.41
UPK3A-201ENST00000216211 SLX4IPQ5VYV7 408 aa12.48□□□□□ -0.41
UPK3A-201ENST00000216211 SFRP4Q6FHJ7 346 aaPredicted RBP12.48□□□□□ -0.41
UPK3A-201ENST00000216211 ZNF773Q6PK81 442 aa12.48□□□□□ -0.41
UPK3A-201ENST00000216211 DCXRQ7Z4W1 244 aa12.48□□□□□ -0.41
UPK3A-201ENST00000216211 ENTHD1Q8IYW4 607 aa12.48□□□□□ -0.41
UPK3A-201ENST00000216211 SLC37A3Q8NCC5 494 aa12.48□□□□□ -0.41
UPK3A-201ENST00000216211 OR8D4Q8NGM9 314 aa12.48□□□□□ -0.41
UPK3A-201ENST00000216211 OR9Q1Q8NGQ5 310 aa12.48□□□□□ -0.41
UPK3A-201ENST00000216211 RHOXF1Q8NHV9 184 aa12.48□□□□□ -0.41
UPK3A-201ENST00000216211 CNIH3Q8TBE1 160 aa12.48□□□□□ -0.41
UPK3A-201ENST00000216211 TECTBQ96PL2 329 aa12.48□□□□□ -0.41
UPK3A-201ENST00000216211 RNF7Q9UBF6 113 aa12.48□□□□□ -0.41
UPK3A-201ENST00000216211 CTSZQ9UBR2 303 aa12.48□□□□□ -0.41
UPK3A-201ENST00000216211 N6AMT1Q9Y5N5 214 aa12.48□□□□□ -0.41
UPK3A-201ENST00000216211 MPZL2O60487 215 aa12.47□□□□□ -0.41
UPK3A-201ENST00000216211 GMDSO60547 372 aa12.47□□□□□ -0.41
UPK3A-201ENST00000216211 MRPS14O60783 128 aaKnown RBP12.47□□□□□ -0.41
UPK3A-201ENST00000216211 WBP4O75554 376 aaKnown RBP12.47□□□□□ -0.41
UPK3A-201ENST00000216211 GYPBP06028 91 aa12.47□□□□□ -0.41
UPK3A-201ENST00000216211 GABRB1P18505 474 aa12.47□□□□□ -0.41
UPK3A-201ENST00000216211 OTX1P32242 354 aaPredicted RBP12.47□□□□□ -0.41
UPK3A-201ENST00000216211 PSMB10P40306 273 aa12.47□□□□□ -0.41
UPK3A-201ENST00000216211 PRKXP51817 358 aa12.47□□□□□ -0.41
UPK3A-201ENST00000216211 CDC42P60953 191 aa12.47□□□□□ -0.41
UPK3A-201ENST00000216211 DEFB112Q30KQ8 113 aa12.47□□□□□ -0.41
UPK3A-201ENST00000216211 PRR31Q5SQ13 230 aa12.47□□□□□ -0.41
UPK3A-201ENST00000216211 C12orf73Q69YU5 71 aa12.47□□□□□ -0.41
UPK3A-201ENST00000216211 RPL13AP3Q6NVV1 102 aa12.47□□□□□ -0.41
UPK3A-201ENST00000216211 RASSF6Q6ZTQ3 369 aa12.47□□□□□ -0.41
UPK3A-201ENST00000216211 OR2T4Q8NH00 348 aa12.47□□□□□ -0.41
UPK3A-201ENST00000216211 FAM81AQ8TBF8 368 aa12.47□□□□□ -0.41
UPK3A-201ENST00000216211 APH1BQ8WW43 257 aa12.47□□□□□ -0.41
UPK3A-201ENST00000216211 COPS4Q9BT78 406 aa12.47□□□□□ -0.41
UPK3A-201ENST00000216211 SLC22A4Q9H015 551 aa12.47□□□□□ -0.41
UPK3A-201ENST00000216211 DUSP21Q9H596 190 aa12.47□□□□□ -0.41
UPK3A-201ENST00000216211 FN3KRPQ9HA64 309 aa12.47□□□□□ -0.41
UPK3A-201ENST00000216211 PLCXD1Q9NUJ7 323 aa12.47□□□□□ -0.41
UPK3A-201ENST00000216211 SCN3BQ9NY72 215 aa12.47□□□□□ -0.41
UPK3A-201ENST00000216211 IL20Q9NYY1 176 aa12.47□□□□□ -0.41
UPK3A-201ENST00000216211 NOP16Q9Y3C1 178 aaKnown RBP12.47□□□□□ -0.41
UPK3A-201ENST00000216211 TPRKBQ9Y3C4 175 aa12.47□□□□□ -0.41
UPK3A-201ENST00000216211 COMMD3-BMI1R4GMX3 469 aa12.47□□□□□ -0.41
UPK3A-201ENST00000216211 C3orf80F5H4A9 247 aa12.46□□□□□ -0.41
UPK3A-201ENST00000216211 HOXA3O43365 443 aaPredicted RBP12.46□□□□□ -0.41
UPK3A-201ENST00000216211 ENSAO43768 121 aaKnown RBP12.46□□□□□ -0.41
UPK3A-201ENST00000216211 SPARCP09486 303 aa12.46□□□□□ -0.41
UPK3A-201ENST00000216211 SLC2A1P11166 492 aa12.46□□□□□ -0.41
UPK3A-201ENST00000216211 JUNBP17275 347 aaPredicted RBP12.46□□□□□ -0.41
UPK3A-201ENST00000216211 IL13RA1P78552 427 aa12.46□□□□□ -0.41
UPK3A-201ENST00000216211 CDK5Q00535 292 aa12.46□□□□□ -0.41
UPK3A-201ENST00000216211 OR8B8Q15620 311 aa12.46□□□□□ -0.41
UPK3A-201ENST00000216211 FOXB2Q5VYV0 432 aa12.46□□□□□ -0.41
UPK3A-201ENST00000216211 RUSC1-AS1Q66K80 236 aa12.46□□□□□ -0.41
UPK3A-201ENST00000216211 DRAM2Q6UX65 266 aa12.46□□□□□ -0.41
UPK3A-201ENST00000216211 SATL1Q86VE3 508 aa12.46□□□□□ -0.41
UPK3A-201ENST00000216211 LNX2Q8N448 690 aa12.46□□□□□ -0.41
UPK3A-201ENST00000216211 ZNF511Q8NB15 262 aa12.46□□□□□ -0.41
UPK3A-201ENST00000216211 BPIFB6Q8NFQ5 453 aa12.46□□□□□ -0.41
UPK3A-201ENST00000216211 TRUB1Q8WWH5 349 aaKnown RBP12.46□□□□□ -0.41
UPK3A-201ENST00000216211 UBE2FQ969M7 185 aa12.46□□□□□ -0.41
UPK3A-201ENST00000216211 SLAMF6Q96DU3 332 aa12.46□□□□□ -0.41
UPK3A-201ENST00000216211 PCGF1Q9BSM1 259 aa12.46□□□□□ -0.41
UPK3A-201ENST00000216211 TSSK6Q9BXA6 273 aa12.46□□□□□ -0.41
UPK3A-201ENST00000216211 SLC25A19Q9HC21 320 aa12.46□□□□□ -0.41
UPK3A-201ENST00000216211 TNFRSF19Q9NS68 423 aa12.46□□□□□ -0.41
UPK3A-201ENST00000216211 CENPMQ9NSP4 180 aa12.46□□□□□ -0.41
UPK3A-201ENST00000216211 TBC1D23Q9NUY8 699 aa12.46□□□□□ -0.41
UPK3A-201ENST00000216211 C1orf123Q9NWV4 160 aa12.46□□□□□ -0.41
UPK3A-201ENST00000216211 LGALS8O00214 317 aa12.45□□□□□ -0.42
UPK3A-201ENST00000216211 ADAM20O43506 726 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms