RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Nkain2Q4PNJ2 208 aa7.68□□□□□ -1.18
Trim39-201ENSMUST00000042717 Fbxw22Q5XG67 466 aa7.68□□□□□ -1.18
Trim39-201ENSMUST00000042717 Zp3rQ60736 579 aa7.68□□□□□ -1.18
Trim39-201ENSMUST00000042717 Foxg1Q60987 481 aa7.68□□□□□ -1.18
Trim39-201ENSMUST00000042717 Klhl9Q6ZPT1 617 aa7.68□□□□□ -1.18
Trim39-201ENSMUST00000042717 Nudt15Q8BG93 170 aa7.68□□□□□ -1.18
Trim39-201ENSMUST00000042717 Henmt1Q8CAE2 395 aa7.68□□□□□ -1.18
Trim39-201ENSMUST00000042717 Fbxo4Q8CHQ0 385 aa7.68□□□□□ -1.18
Trim39-201ENSMUST00000042717 Abhd6Q8R2Y0 336 aa7.68□□□□□ -1.18
Trim39-201ENSMUST00000042717 Olfr994Q8VF73 314 aa7.68□□□□□ -1.18
Trim39-201ENSMUST00000042717 Gatad2bQ8VHR5 594 aaKnown RBP7.68□□□□□ -1.18
Trim39-201ENSMUST00000042717 Sf3b5Q923D4 86 aaKnown RBP7.68□□□□□ -1.18
Trim39-201ENSMUST00000042717 Pnrc2Q9CR73 140 aa7.68□□□□□ -1.18
Trim39-201ENSMUST00000042717 Tmem178aQ9CZ16 297 aa7.68□□□□□ -1.18
Trim39-201ENSMUST00000042717 Sec16aA2AIX1 2377 aa7.68□□□□□ -1.18
Trim39-201ENSMUST00000042717 Heatr5aQ5PRF0 2038 aa7.68□□□□□ -1.18
Trim39-201ENSMUST00000042717 Igkv6-23A0A140T8N5 115 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Gm39566A0A1B0GT45 1251 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 CrnnD3YUU6 520 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Ccdc74aE9Q9U8 364 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Casp16-psI6L890 176 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 D430019H16RikJ3QPM6 83 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Vmn1r121K7N6J4 314 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 DdostO54734 441 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Zfp36l2P23949 484 aaKnown RBP7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Fgf9P54130 208 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Rps11P62281 158 aaKnown RBP7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Rnf166Q3U9F6 237 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 1700001J03RikQ80ZR8 219 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Gm4922Q8C0N0 497 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Mrpl54Q9CPW3 135 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 TpbpbQ9CQC0 121 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Rpl14Q9CR57 217 aaKnown RBP7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Rpl22l1Q9D7S7 122 aaKnown RBP7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 1700034I23RikQ9D9Q3 184 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Ctag2Q9D9S4 219 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 DhdhQ9DBB8 333 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Hmg20aQ9DC33 346 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 NmuQ9QXK8 174 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Gm10358A0A1D5RLD8 333 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Gsg1lD3Z7H4 322 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Gm6034E9Q101 117 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Gm19684G3UZ45 117 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Gm21750L7N228 499 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Stmn3O70166 180 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Tdpoz1P0DMR5 365 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Gm9125P0DMR6 365 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 GapdhP16858 333 aaKnown RBP7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Fosl1P48755 273 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 CxadrP97792 365 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Cnep1r1Q3UJ81 125 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Bend6Q6PFX2 281 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Slc22a12Q8CFZ5 553 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 PiguQ8K358 434 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Olfr164Q8VF87 315 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Olfr120Q8VFQ2 330 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Ubl7Q91W67 380 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Gpx6Q91WR8 221 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Actl11Q9D5V1 1207 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Tmem54Q9D7S1 219 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Thsd1Q9JM61 851 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Dctn3Q9Z0Y1 186 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Rasal1Q9Z268 799 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Gm3839S4R1W1 333 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Gm12666A2AMD0 254 aaKnown RBP7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Xlr4aA2BI40 215 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Tarm1B6A8R8 288 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Gm498D3YYH9 372 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Vmn1r34G3XA52 309 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Klk1b3P00756 261 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Gpm6aP35802 278 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Tmem104Q3TB48 496 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Spc25Q3UA16 226 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Gm6899Q3USS0 134 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Zfp157Q6PCM4 567 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 FevQ8QZW2 237 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Lsm10Q8QZX5 122 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Kiaa2013Q91X21 634 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Park7Q99LX0 189 aaKnown RBP7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Tmed11Q9D2R4 215 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 NosipQ9D6T0 301 aaKnown RBP7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Alkbh4Q9D8F1 300 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Plekhb1Q9QYE9 243 aa7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Actl6aQ9Z2N8 429 aaKnown RBP7.67□□□□□ -1.18
Trim39-201ENSMUST00000042717 Enpp7D3Z6V6 446 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Olfr288E9Q1P2 318 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Olfr430E9Q5F1 317 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Slc30a4O35149 430 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Gm10881P01642 115 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 P06344 263 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Ccl3P10855 92 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Prkar1bP12849 381 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Psmd7P26516 321 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Slc7a10P63115 530 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Asphd1Q2TA57 360 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Tgtp2Q3T9E4 415 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Bcap31Q61335 245 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Sema3bQ62177 748 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Tgtp1Q62293 415 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Fam57bQ7TNV1 275 aa7.66□□□□□ -1.18
Retrieved 100 of 22,080 RNA–protein pairs in 29.7 ms