RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Agpat4Q8K4X7 378 aa15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Calhm2Q8VEC4 323 aa15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Mnx1Q9QZW9 404 aa15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 EdarQ9R187 448 aa15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Srp9P49962 86 aa15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Ndrg4Q8BTG7 352 aaKnown RBP15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Olfr1457Q8VFK3 317 aa15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Tcf19Q99KJ5 263 aa15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Bud23Q9CY21 281 aa15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Olfr887Q9EQA6 309 aa15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 4930444P10RikD3YUR1 185 aa15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Dnase1P49183 284 aa15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Efna1P52793 205 aa15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Olfr804Q7TRH7 314 aa15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Olfr128Q7TRJ1 308 aa15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Slc2a12Q8BFW9 622 aa15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Btbd35f21A0A140T8Q5 498 aa15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 P01800 113 aa15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Tead1P30051 426 aaKnown RBP15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Olfr1270Q8VGP3 304 aa15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Pttg1Q9CQJ7 199 aa15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 AplfQ9D842 499 aa15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Btbd17Q9DB72 478 aa15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Trpm7Q923J1 1863 aa15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Gm45808A0A1B0GSH8 263 aa15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Gm21863J3KMP8 111 aa15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Olfr187Q8VEX6 308 aa15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Neurl2Q9D0S4 285 aa15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Psme4Q5SSW2 1843 aa15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 PhipQ8VDD9 1821 aaKnown RBP15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Olfr110A2RT31 317 aa15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Mbd3l2Q3UXB0 228 aa15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Amer3Q6NS69 780 aa15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Olfr111Q7TRK1 317 aa15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Tmem56Q8CGF5 276 aa15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Olfr444Q8VFS6 310 aa15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Plrg1Q922V4 513 aaKnown RBP15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Scamp4Q9JKV5 230 aa15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Slc47a2Q3V050 573 aa15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Olfr837Q8VFJ4 312 aa15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 CsQ9CZU6 464 aaKnown RBP15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Dtd1Q9DD18 209 aaKnown RBP15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 StrapQ9Z1Z2 350 aaKnown RBP15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Gm572B1ARY8 399 aa15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Nat8f7E0CYR6 227 aa15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Stfa1P35175 97 aa15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Olfr1428Q0VDY1 314 aa15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 BphlQ8R164 291 aa15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Ubac2Q8R1K1 345 aa15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Dscr3O35075 297 aa15.22■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 AF067061O70616 171 aa15.22■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Gpx3P46412 226 aa15.22■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Smpd1Q04519 627 aa15.22■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Samd12Q0VE29 161 aa15.22■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Olfr335-psQ7TRY6 312 aa15.22■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Tmem225Q9D9S2 230 aa15.22■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Fgf2P15655 154 aa15.22■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Mcrip1Q3UGS4 97 aa15.22■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Pptc7Q6NVE9 310 aa15.22■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Elfn1Q8C8T7 828 aa15.22■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Olfr794Q8VF26 320 aa15.22■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Bap18Q9DCT6 171 aa15.22■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Gabrg1Q9R0Y8 465 aa15.22■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 CnmdQ9Z1F6 334 aa15.22■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Cdk5P49615 292 aa15.22■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 TfptQ3U1J1 259 aa15.22■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Bhlhe23Q8BGW3 223 aa15.22■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Plxdc2Q9DC11 530 aa15.22■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Syt9Q9R0N9 491 aa15.22■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Shisa8J3QNX5 399 aa15.22■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Slc10a1O08705 362 aa15.22■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Pcmt1P23506 227 aa15.22■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Q9CQT6 229 aa15.22■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Gpr12P35412 334 aa15.22■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Olfr1140Q7TR39 311 aa15.22■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Scgb1b27Q91WB5 92 aa15.22■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Zfp623Q9CY99 499 aa15.22■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Alx4O35137 399 aa15.22■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Ccdc116Q80X53 541 aa15.22■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Trib1Q8K4K4 372 aa15.22■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Pus1Q9WU56 423 aa15.22■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Baz2aQ91YE5 1889 aaKnown RBP15.22■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Plscr5J3QM92 274 aa15.22■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Olfr1465Q7TQR2 307 aa15.22■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Olfr1006A2ALD2 312 aa15.21■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Gm9972E9Q053 102 aa15.21■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 P01851 173 aa15.21■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 P01852 173 aa15.21■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Znf865Q3U3I9 1058 aa15.21■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Ubtd2Q6PGH0 234 aa15.21■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Il20raQ6PHB0 546 aa15.21■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Sec22aQ8BH47 307 aa15.21■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Slco1b2Q9JJL3 689 aa15.21■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Dbil5O09035 87 aa15.21■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Smim37Q8BT35 56 aa15.21■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Olfr1378Q8VGH0 315 aa15.21■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Gm13271B1AYH9 182 aa15.21■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Olfr920E9Q413 310 aa15.21■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Dzank1Q8C008 778 aa15.21■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Psat1Q99K85 370 aa15.21■□□□□ 0.03
Retrieved 100 of 22,080 RNA–protein pairs in 31.5 ms