RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Dnmt3bO88509 859 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Id1P20067 168 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Gm2016Q3TQZ4 144 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Olfr9Q60885 312 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 C130079G13RikQ8BUY2 280 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Olfr734Q8VFT4 313 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 BambiQ9D0L6 260 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Arl5bQ9D4P0 179 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Ccl27Q9Z1X0 120 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Tcrg-V7A0A0A6YYE8 116 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Vmn1r7E9Q8T0 311 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Gm11027G8JL69 66 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Gabrr1P56475 480 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 CycsP62897 105 aaKnown RBP9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Olfr1442Q0VEV7 312 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Plpp5Q3UMZ3 260 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Bbs12Q5SUD9 708 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Rsl1Q7M6Y1 485 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Actrt3Q8BXF8 369 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 AmtQ8CFA2 403 aaKnown RBP9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Olfr51Q8VGG9 307 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 NosipQ9D6T0 301 aaKnown RBP9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Prl8a1Q9DAV8 240 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Pycr3Q9DCC4 274 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Slco1b2Q9JJL3 689 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Zfp982A2A8Q4 368 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Prr36E9PV26 1098 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Gm3573L7N292 184 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Atpif1O35143 106 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 GamtO35969 236 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 StarP51557 284 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Fkbp14P59024 211 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 PkibQ04758 92 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 TrmoQ562D6 431 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 NarflQ7TMW6 476 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Olfr107Q7TRK4 309 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Creb5Q8K1L0 357 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Egln1Q91YE3 400 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 MmachcQ9CZD0 279 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Syt9Q9R0N9 491 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Fbxw27A0A1D5RLF0 466 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Calhm1D3Z291 348 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Olfr419E9Q0Y7 313 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Ceacam16E9QA28 426 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Plscr5J3QM92 274 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 CtgfP29268 348 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 G6pd2P97324 513 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 CenptQ3TJM4 515 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Nkx6-3Q3UHX8 262 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Bahd1Q497V6 772 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Ptpn18Q61152 453 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Znf503Q7TMA2 652 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Q8C3I9 435 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Olfr732Q8VFT5 308 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Glipr1Q9CWG1 255 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Tmem179bQ9CY24 219 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Reep6Q9JM62 201 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 LipgQ9WVG5 500 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Polr2aP08775 1970 aaKnown RBP9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Ighv1-78A0A0G2JGN3 117 aa9.34□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Igkv6-20A0A140T8P2 115 aa9.34□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Zfp995E9Q6M3 437 aa9.34□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Irs3O54718 495 aa9.34□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Bloc1s1O55102 125 aa9.34□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Tnfsf10P50592 291 aa9.34□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 StomP54116 284 aa9.34□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Fgf14P70379 247 aa9.34□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 TepsinQ3U3N6 573 aa9.34□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 1700057G04RikQ3V0U0 232 aa9.34□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 ApoolQ78IK4 265 aa9.34□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Olfr1349Q7TQV1 317 aa9.34□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Sec22aQ8BH47 307 aa9.34□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Olfr360Q8VFP3 317 aa9.34□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Med6Q921D4 246 aaKnown RBP9.34□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Ceacam18Q9D871 376 aa9.34□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Gm13723A0A1L1SUP2 315 aa9.34□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 A0A286YD13 301 aa9.34□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Sstr5O08858 362 aa9.34□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 P01675 107 aa9.34□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 P01676 107 aa9.34□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 P01677 107 aa9.34□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 P01678 107 aa9.34□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Csn2P10598 231 aa9.34□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 FahP35505 419 aa9.34□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Mfap2P55002 183 aa9.34□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Cpeb1P70166 561 aa9.34□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Smad4P97471 551 aa9.34□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Slc25a33Q3TZX3 320 aa9.34□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 PigvQ7TPN3 493 aa9.34□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Pramel5Q7TPY4 500 aa9.34□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Fahd1Q8R0F8 227 aa9.34□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 C1qtnf12Q8R2Z0 308 aa9.34□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 PnpoQ91XF0 261 aa9.34□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Pofut1Q91ZW2 393 aa9.34□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Aig1Q9D8B1 262 aa9.34□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Erv3Q9DAX3 200 aa9.34□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Mmp1bQ9EPL6 463 aa9.34□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 RfxankQ9Z205 269 aa9.34□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Mettl8A2AUU0 281 aa9.34□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Klk1b11P15946 261 aa9.34□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 33.3 ms