RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Oc90Q9Z0L3 485 aa14.58□□□□□ -0.07
Trim28-201ENSMUST00000005705 SpenQ62504 3644 aaKnown RBP14.58□□□□□ -0.08
Trim28-201ENSMUST00000005705 Skint10A7TZG1 354 aa14.58□□□□□ -0.08
Trim28-201ENSMUST00000005705 Olfr373E9Q4J3 314 aa14.58□□□□□ -0.08
Trim28-201ENSMUST00000005705 Olfr427E9Q7E7 315 aa14.58□□□□□ -0.08
Trim28-201ENSMUST00000005705 Gm21820J3KMU2 361 aa14.58□□□□□ -0.08
Trim28-201ENSMUST00000005705 Gm3633L7N233 213 aa14.58□□□□□ -0.08
Trim28-201ENSMUST00000005705 Gm9611L7N476 213 aa14.58□□□□□ -0.08
Trim28-201ENSMUST00000005705 EdaO54693 391 aa14.58□□□□□ -0.08
Trim28-201ENSMUST00000005705 Il6P08505 211 aa14.58□□□□□ -0.08
Trim28-201ENSMUST00000005705 Rab11bP46638 218 aa14.58□□□□□ -0.08
Trim28-201ENSMUST00000005705 B4galnt1Q09200 533 aa14.58□□□□□ -0.08
Trim28-201ENSMUST00000005705 Cd34Q64314 382 aa14.58□□□□□ -0.08
Trim28-201ENSMUST00000005705 Mc2rQ64326 296 aa14.58□□□□□ -0.08
Trim28-201ENSMUST00000005705 LcorQ6ZPI3 433 aa14.58□□□□□ -0.08
Trim28-201ENSMUST00000005705 Olfr372Q7TRY2 314 aa14.58□□□□□ -0.08
Trim28-201ENSMUST00000005705 Q8BR90 294 aa14.58□□□□□ -0.08
Trim28-201ENSMUST00000005705 Pla2g3Q8BZT7 504 aa14.58□□□□□ -0.08
Trim28-201ENSMUST00000005705 CenpoQ8K015 298 aa14.58□□□□□ -0.08
Trim28-201ENSMUST00000005705 BanpQ8VBU8 548 aa14.58□□□□□ -0.08
Trim28-201ENSMUST00000005705 Swsap1Q8VCI7 278 aa14.58□□□□□ -0.08
Trim28-201ENSMUST00000005705 Olfr510Q8VEW6 314 aa14.58□□□□□ -0.08
Trim28-201ENSMUST00000005705 Olfr168Q8VF05 312 aa14.58□□□□□ -0.08
Trim28-201ENSMUST00000005705 Olfr1501Q8VFQ3 315 aa14.58□□□□□ -0.08
Trim28-201ENSMUST00000005705 NtmQ99PJ0 344 aa14.58□□□□□ -0.08
Trim28-201ENSMUST00000005705 Eef1akmt1Q9CY45 214 aa14.58□□□□□ -0.08
Trim28-201ENSMUST00000005705 Olfr944Q9EQ91 311 aa14.58□□□□□ -0.08
Trim28-201ENSMUST00000005705 Vmn2r16E9Q025 850 aa14.58□□□□□ -0.08
Trim28-201ENSMUST00000005705 Ighg1P01869 393 aa14.58□□□□□ -0.08
Trim28-201ENSMUST00000005705 Negr1Q80Z24 348 aa14.58□□□□□ -0.08
Trim28-201ENSMUST00000005705 Mospd3Q8BGG6 235 aa14.58□□□□□ -0.08
Trim28-201ENSMUST00000005705 Nabp1Q8BGW5 198 aa14.58□□□□□ -0.08
Trim28-201ENSMUST00000005705 Mmd2Q8R189 247 aa14.58□□□□□ -0.08
Trim28-201ENSMUST00000005705 Olfr800Q8VFH7 311 aa14.58□□□□□ -0.08
Trim28-201ENSMUST00000005705 Olfr1238Q8VG59 315 aa14.58□□□□□ -0.08
Trim28-201ENSMUST00000005705 Olfr1389Q8VGX0 311 aa14.58□□□□□ -0.08
Trim28-201ENSMUST00000005705 Tnfsf14Q9QYH9 239 aa14.58□□□□□ -0.08
Trim28-201ENSMUST00000005705 Mfap5Q9QZJ6 164 aa14.58□□□□□ -0.08
Trim28-201ENSMUST00000005705 Clcf1Q9QZM3 225 aa14.58□□□□□ -0.08
Trim28-201ENSMUST00000005705 5430403G16RikD3Z5L4 667 aa14.57□□□□□ -0.08
Trim28-201ENSMUST00000005705 Vmn1r175K7N6T9 304 aa14.57□□□□□ -0.08
Trim28-201ENSMUST00000005705 P2ry2P35383 373 aa14.57□□□□□ -0.08
Trim28-201ENSMUST00000005705 GastP48757 101 aa14.57□□□□□ -0.08
Trim28-201ENSMUST00000005705 Mmp25Q3U435 615 aa14.57□□□□□ -0.08
Trim28-201ENSMUST00000005705 Rnf166Q3U9F6 237 aa14.57□□□□□ -0.08
Trim28-201ENSMUST00000005705 Olfr201Q7TS38 308 aa14.57□□□□□ -0.08
Trim28-201ENSMUST00000005705 Olfr970Q8VFN3 311 aa14.57□□□□□ -0.08
Trim28-201ENSMUST00000005705 Gpx4Q91XR9 253 aa14.57□□□□□ -0.08
Trim28-201ENSMUST00000005705 Sntb1Q99L88 537 aaKnown RBP14.57□□□□□ -0.08
Trim28-201ENSMUST00000005705 Alkbh7Q9D6Z0 221 aa14.57□□□□□ -0.08
Trim28-201ENSMUST00000005705 Tlnrd1Q9ERE8 362 aa14.57□□□□□ -0.08
Trim28-201ENSMUST00000005705 BlnkQ9QUN3 457 aa14.57□□□□□ -0.08
Trim28-201ENSMUST00000005705 Trav10nA0A075B622 114 aa14.57□□□□□ -0.08
Trim28-201ENSMUST00000005705 Trav10A0A075B642 114 aa14.57□□□□□ -0.08
Trim28-201ENSMUST00000005705 Mptx2D3YYJ7 219 aa14.57□□□□□ -0.08
Trim28-201ENSMUST00000005705 Olfr419E9Q0Y7 313 aa14.57□□□□□ -0.08
Trim28-201ENSMUST00000005705 Gm10260F6YVP7 152 aa14.57□□□□□ -0.08
Trim28-201ENSMUST00000005705 Vmn1r170K7N6W9 304 aa14.57□□□□□ -0.08
Trim28-201ENSMUST00000005705 Ca3P16015 260 aa14.57□□□□□ -0.08
Trim28-201ENSMUST00000005705 Cd40lgP27548 260 aa14.57□□□□□ -0.08
Trim28-201ENSMUST00000005705 Epha4Q03137 986 aa14.57□□□□□ -0.08
Trim28-201ENSMUST00000005705 Epha6Q62413 1035 aa14.57□□□□□ -0.08
Trim28-201ENSMUST00000005705 Olfr776Q7TRI3 312 aa14.57□□□□□ -0.08
Trim28-201ENSMUST00000005705 Fam53bQ8BGR5 422 aa14.57□□□□□ -0.08
Trim28-201ENSMUST00000005705 Cdhr3Q8BL00 831 aa14.57□□□□□ -0.08
Trim28-201ENSMUST00000005705 Olfr849Q8VFF6 312 aa14.57□□□□□ -0.08
Trim28-201ENSMUST00000005705 Snx18Q91ZR2 614 aa14.57□□□□□ -0.08
Trim28-201ENSMUST00000005705 Atg5Q99J83 275 aa14.57□□□□□ -0.08
Trim28-201ENSMUST00000005705 OgfrQ99PG2 633 aa14.57□□□□□ -0.08
Trim28-201ENSMUST00000005705 9530002B09RikQ9EPV7 135 aa14.57□□□□□ -0.08
Trim28-201ENSMUST00000005705 Stard10Q9JMD3 291 aa14.57□□□□□ -0.08
Trim28-201ENSMUST00000005705 TollipQ9QZ06 274 aa14.57□□□□□ -0.08
Trim28-201ENSMUST00000005705 KantrA0A1W2P7I0 76 aa14.56□□□□□ -0.08
Trim28-201ENSMUST00000005705 Nkx6-2D3Z4R4 277 aa14.56□□□□□ -0.08
Trim28-201ENSMUST00000005705 Gm21767J3QPV5 180 aa14.56□□□□□ -0.08
Trim28-201ENSMUST00000005705 MyogP12979 224 aa14.56□□□□□ -0.08
Trim28-201ENSMUST00000005705 Tnfrsf4P47741 272 aa14.56□□□□□ -0.08
Trim28-201ENSMUST00000005705 Klf16P58334 251 aa14.56□□□□□ -0.08
Trim28-201ENSMUST00000005705 Gng8P63078 70 aa14.56□□□□□ -0.08
Trim28-201ENSMUST00000005705 Fam196aQ3USH1 422 aa14.56□□□□□ -0.08
Trim28-201ENSMUST00000005705 Tmeff1Q6PFE7 372 aa14.56□□□□□ -0.08
Trim28-201ENSMUST00000005705 Olfr1126Q7TR49 314 aa14.56□□□□□ -0.08
Trim28-201ENSMUST00000005705 Cep41Q99NF3 373 aa14.56□□□□□ -0.08
Trim28-201ENSMUST00000005705 Gm28102A0A087WQL3 222 aa14.56□□□□□ -0.08
Trim28-201ENSMUST00000005705 Gm45716A0A1B0GRQ0 93 aa14.56□□□□□ -0.08
Trim28-201ENSMUST00000005705 Gm12355A2A4X6 163 aa14.56□□□□□ -0.08
Trim28-201ENSMUST00000005705 4931422A03RikA2BHN9 113 aa14.56□□□□□ -0.08
Trim28-201ENSMUST00000005705 Vmn1r91E9PZR7 307 aa14.56□□□□□ -0.08
Trim28-201ENSMUST00000005705 Srsf3P84104 164 aaKnown RBP14.56□□□□□ -0.08
Trim28-201ENSMUST00000005705 ArhgdigQ62160 225 aa14.56□□□□□ -0.08
Trim28-201ENSMUST00000005705 Olfr1167Q7TR26 316 aa14.56□□□□□ -0.08
Trim28-201ENSMUST00000005705 Plppr1Q8BFZ2 325 aa14.56□□□□□ -0.08
Trim28-201ENSMUST00000005705 Vmn1r230Q8R2A2 316 aa14.56□□□□□ -0.08
Trim28-201ENSMUST00000005705 Q8R3Y5 413 aa14.56□□□□□ -0.08
Trim28-201ENSMUST00000005705 Sla2Q8R4L0 259 aa14.56□□□□□ -0.08
Trim28-201ENSMUST00000005705 Olfr291Q8VF60 317 aa14.56□□□□□ -0.08
Trim28-201ENSMUST00000005705 Olfr134Q8VG95 312 aa14.56□□□□□ -0.08
Trim28-201ENSMUST00000005705 Arl5bQ9D4P0 179 aa14.56□□□□□ -0.08
Trim28-201ENSMUST00000005705 Slc2a8Q9JIF3 477 aa14.56□□□□□ -0.08
Trim28-201ENSMUST00000005705 Olfr1066A2AK62 313 aa14.56□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 46.8 ms