RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Mettl11bB2RXM4 283 aa16.78■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Vmn2r107E9PZJ7 861 aa16.78■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Psmb1O09061 240 aa16.78■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Lmx1bO88609 395 aa16.78■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 H2-Q10P01898 325 aa16.78■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Clk1P22518 483 aa16.78■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Plin2P43883 425 aa16.78■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Fabp2P55050 132 aa16.78■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Crabp1P62965 137 aa16.78■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Gch1Q05915 241 aa16.78■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Hist2h2abQ64522 130 aa16.78■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Tex12Q9CR81 123 aa16.78■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Supt7lQ9CZV5 412 aa16.78■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Bbs10Q9DBI2 713 aa16.78■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Slco5a1E9PVD9 850 aa16.77■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Gm2056J3QQ02 144 aa16.77■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Hoxa2P31245 372 aa16.77■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Foxa3P35584 353 aa16.77■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 MatkP41242 505 aa16.77■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Mex3dQ3UE17 643 aaKnown RBP16.77■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 2210407C18RikQ6YI28 220 aa16.77■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 CslQ80X68 466 aa16.77■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 9130023H24RikQ8BG98 337 aa16.77■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 NrrosQ8BMT4 693 aa16.77■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Q8C4X7 151 aa16.77■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Olfr732Q8VFT5 308 aa16.77■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Prss42Q8VIF2 335 aa16.77■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Carhsp1Q9CR86 148 aa16.77■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Cnih4Q9CX13 139 aa16.77■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Tex37Q9DAG4 180 aa16.77■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Cml5Q9QXS8 227 aa16.77■□□□□ 0.28
Shkbp1-201ENSMUST00000003857 Htra4A2RT60 483 aa16.77■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Wdfy1E9Q4P1 410 aa16.77■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Lipo5F6QKH6 233 aa16.77■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Ccl20O89093 97 aa16.77■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Ca3P16015 260 aa16.77■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Cpt2P52825 658 aaKnown RBP16.77■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Fgf14P70379 247 aa16.77■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Slc25a33Q3TZX3 320 aa16.77■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Oxa1lQ8BGA9 433 aa16.77■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Slc25a44Q8BGF9 314 aa16.77■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Bex4Q9CWT2 118 aa16.77■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 EurlQ9D7G4 290 aa16.77■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Srxn1Q9D975 136 aa16.77■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Vmn1r40Q9EQ46 310 aa16.77■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Suv39h2Q9EQQ0 477 aa16.77■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Olfr65A0A1B0GSF4 315 aa16.76■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Obp1bA2AEP0 171 aa16.76■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Gm14743A2BHD2 171 aa16.76■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Olfr173E9QAT7 321 aa16.76■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Il5raP21183 415 aa16.76■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 EbpP70245 230 aa16.76■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Psg26Q4KL65 475 aa16.76■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 SrmsQ62270 496 aa16.76■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Znf629Q6A085 867 aa16.76■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Cggbp1Q8BHG9 167 aaKnown RBP16.76■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Neil1Q8K4Q6 389 aa16.76■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Olfr1489Q8VFQ5 313 aa16.76■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Olfr1466Q8VFW4 310 aa16.76■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Wdr5bQ9D7H2 328 aa16.76■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Tnfrsf22Q9ER62 198 aa16.76■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Cabin1G3X8Q1 2187 aaKnown RBP16.76■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Cxcl2P10889 100 aa16.75■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 MpzP27573 248 aa16.75■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Sox1P53783 391 aa16.75■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Q3U6N9 222 aa16.75■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Olfr787Q7TRI1 312 aa16.75■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Olfr487Q7TRU9 314 aa16.75■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 CblcQ80XL1 496 aa16.75■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Bhlhe23Q8BGW3 223 aa16.75■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Upp2Q8CGR7 320 aa16.75■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Sav1Q8VEB2 386 aa16.75■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Tex29Q9DA77 186 aa16.75■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 A26c2A0A140LHE4 291 aa16.75■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Cisd3B1AR13 137 aa16.75■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Rnaset2aC0HKG5 259 aa16.75■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Rnaset2bC0HKG6 259 aa16.75■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 BC035044E0CXF8 138 aa16.75■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Gm3033M0QWI0 180 aa16.75■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Gm3532M0QWL4 194 aa16.75■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Mcpt9O35164 246 aa16.75■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 H2-EaP01904 255 aa16.75■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 P04224 255 aa16.75■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Il1r1P13504 576 aa16.75■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Gal3st4Q3V1B8 480 aa16.75■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Traf4Q61382 470 aa16.75■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Olfr1113Q7TR54 326 aa16.75■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Defb21Q8C5Z4 100 aa16.75■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Olfr919Q8VF78 315 aa16.75■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Olfr341Q8VGK9 313 aa16.75■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Syt17Q920M7 470 aa16.75■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Xrcc2Q9CX47 278 aa16.75■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Rp2Q9EPK2 347 aa16.75■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Fndc7A2AED3 737 aa16.74■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Vmn1r174E9PYW5 313 aa16.74■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Olfr568E9Q554 313 aa16.74■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Lcn12Q6JVL5 193 aa16.74■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Slc22a18Q78KK3 406 aa16.74■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Olfr1058Q7TR74 316 aa16.74■□□□□ 0.27
Shkbp1-201ENSMUST00000003857 Rell2Q8BRJ3 303 aa16.74■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 105.4 ms