RNA–Protein interactions for RNA: snR55

snR55, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR55, Length 98 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR55snR55 UGP1P32861 499 aaKnown RBP2.42□□□□□ -2.02
snR55snR55 PMC1P38929 1173 aaPredicted RBP2.42□□□□□ -2.02
snR55snR55 CCT5P40413 562 aaKnown RBP2.42□□□□□ -2.02
snR55snR55 ASN1P49089 572 aaKnown RBP2.42□□□□□ -2.02
snR55snR55 YGR151CP53287 111 aa2.42□□□□□ -2.02
snR55snR55 STP1Q00947 519 aa2.42□□□□□ -2.02
snR55snR55 NAN1Q02931 896 aaKnown RBP2.42□□□□□ -2.02
snR55snR55 SPO75Q07798 868 aa2.42□□□□□ -2.02
snR55snR55 TOM70P07213 617 aaKnown RBP2.41□□□□□ -2.02
snR55snR55 RNR1P21524 888 aaKnown RBP2.41□□□□□ -2.02
snR55snR55 KSP1P38691 1029 aaKnown RBP2.41□□□□□ -2.02
snR55snR55 MIP6P38760 659 aaKnown RBP2.41□□□□□ -2.02
snR55snR55 YHR097CP38809 366 aaKnown RBP2.41□□□□□ -2.02
snR55snR55 RSP5P39940 809 aaKnown RBP2.41□□□□□ -2.02
snR55snR55 ULP2P40537 1034 aaPredicted RBP2.41□□□□□ -2.02
snR55snR55 ULA1Q12059 462 aa2.41□□□□□ -2.02
snR55snR55 CLF1Q12309 687 aaPredicted RBP2.41□□□□□ -2.02
snR55snR55 CIT1P00890 479 aa2.4□□□□□ -2.03
snR55snR55 RAD18P10862 487 aa2.4□□□□□ -2.03
snR55snR55 HSP60P19882 572 aaKnown RBP2.4□□□□□ -2.03
snR55snR55 PEX1P24004 1043 aa2.4□□□□□ -2.03
snR55snR55 ECM32P32644 1121 aaKnown RBP2.4□□□□□ -2.03
snR55snR55 SEC6P32844 805 aa2.4□□□□□ -2.03
snR55snR55 HOT13P36078 116 aa2.4□□□□□ -2.03
snR55snR55 GID8P40208 455 aa2.4□□□□□ -2.03
snR55snR55 ALY2P47029 1046 aa2.4□□□□□ -2.03
snR55snR55 NOP9P47077 666 aaKnown RBP2.4□□□□□ -2.03
snR55snR55 SPC98P53540 846 aa2.4□□□□□ -2.03
snR55snR55 THI22Q06490 572 aa2.4□□□□□ -2.03
snR55snR55 YDL124WQ07551 312 aaKnown RBP2.4□□□□□ -2.03
snR55snR55 BMS1Q08965 1183 aaKnown RBP2.4□□□□□ -2.03
snR55snR55 OSH2Q12451 1283 aa2.4□□□□□ -2.03
snR55snR55 Q0142Q9ZZW4 58 aa2.4□□□□□ -2.03
snR55snR55 RAD4P14736 754 aa2.39□□□□□ -2.03
snR55snR55 BCS1P32839 456 aa2.39□□□□□ -2.03
snR55snR55 APT2P36973 181 aa2.39□□□□□ -2.03
snR55snR55 BIT2P38346 545 aa2.39□□□□□ -2.03
snR55snR55 YHR020WP38708 688 aaKnown RBP2.39□□□□□ -2.03
snR55snR55 BNA2P47125 453 aa2.39□□□□□ -2.03
snR55snR55 PIP2P52960 996 aa2.39□□□□□ -2.03
snR55snR55 RTA1P53047 317 aa2.39□□□□□ -2.03
snR55snR55 ORC4P54791 529 aa2.39□□□□□ -2.03
snR55snR55 ECM3Q99252 613 aa2.39□□□□□ -2.03
snR55snR55 LAM4P38800 1345 aa2.39□□□□□ -2.03
snR55snR55 PSA1P41940 361 aaKnown RBP2.38□□□□□ -2.03
snR55snR55 IRC8P47046 822 aa2.38□□□□□ -2.03
snR55snR55 NMA2P53204 395 aa2.38□□□□□ -2.03
snR55snR55 ARG7Q04728 441 aa2.38□□□□□ -2.03
snR55snR55 YDL086WQ07505 273 aa2.38□□□□□ -2.03
snR55snR55 FRE7Q12333 620 aa2.38□□□□□ -2.03
snR55snR55 TPK2P06245 380 aa2.37□□□□□ -2.03
snR55snR55 YNL195CP40168 261 aa2.37□□□□□ -2.03
snR55snR55 YGR125WP53273 1036 aa2.37□□□□□ -2.03
snR55snR55 REC102Q02721 264 aa2.37□□□□□ -2.03
snR55snR55 CHS5Q12114 671 aaKnown RBP2.37□□□□□ -2.03
snR55snR55 LEU2P04173 364 aaPredicted RBP2.36□□□□□ -2.03
snR55snR55 PRP28P23394 588 aa2.36□□□□□ -2.03
snR55snR55 MIH1P23748 554 aa2.36□□□□□ -2.03
snR55snR55 MSS1P32559 526 aaPredicted RBP2.36□□□□□ -2.03
snR55snR55 YEL1P34225 687 aa2.36□□□□□ -2.03
snR55snR55 CTP1P38152 299 aa2.36□□□□□ -2.03
snR55snR55 HUL4P40985 892 aa2.36□□□□□ -2.03
snR55snR55 PMT6P42934 759 aa2.36□□□□□ -2.03
snR55snR55 RSC8P43609 557 aaKnown RBP2.36□□□□□ -2.03
snR55snR55 MPS3P47069 682 aa2.36□□□□□ -2.03
snR55snR55 SNF12P53628 566 aa2.36□□□□□ -2.03
snR55snR55 LEE1Q02799 301 aaKnown RBP2.36□□□□□ -2.03
snR55snR55 YDR179W-AQ03983 463 aa2.36□□□□□ -2.03
snR55snR55 RKI1Q12189 258 aa2.36□□□□□ -2.03
snR55snR55 AI5_ALPHAQ9ZZX1 630 aa2.36□□□□□ -2.03
snR55snR55 ABF1P14164 731 aa2.35□□□□□ -2.03
snR55snR55 MTC2P34246 357 aa2.35□□□□□ -2.03
snR55snR55 MCD4P36051 919 aa2.35□□□□□ -2.03
snR55snR55 PIG2P40187 538 aa2.35□□□□□ -2.03
snR55snR55 KHA1P40309 873 aa2.35□□□□□ -2.03
snR55snR55 TIM54P47045 478 aa2.35□□□□□ -2.03
snR55snR55 RFX1P48743 811 aa2.35□□□□□ -2.03
snR55snR55 ARP4P80428 489 aa2.35□□□□□ -2.03
snR55snR55 FLC1Q08967 793 aa2.35□□□□□ -2.03
snR55snR55 WRS1Q12109 432 aaKnown RBP2.35□□□□□ -2.03
snR55snR55 MDM20Q12387 796 aaKnown RBP2.35□□□□□ -2.03
snR55snR55 AAD3P25612 363 aa2.34□□□□□ -2.03
snR55snR55 FEN2P25621 512 aaKnown RBP2.34□□□□□ -2.03
snR55snR55 YKR051WP36142 418 aa2.34□□□□□ -2.03
snR55snR55 YFL052WP43551 465 aa2.34□□□□□ -2.03
snR55snR55 YGL117WP53133 265 aa2.34□□□□□ -2.03
snR55snR55 COX18P53239 316 aa2.34□□□□□ -2.03
snR55snR55 GIS2P53849 153 aaKnown RBP RIP-Chip data2.34□□□□□ -2.03not detected
snR55snR55 YSH1Q06224 779 aaPredicted RBP2.34□□□□□ -2.03
snR55snR55 CAN1P04817 590 aa2.33□□□□□ -2.04
snR55snR55 YKR018CP36114 725 aa2.32□□□□□ -2.04
snR55snR55 APL3P38065 1025 aa2.32□□□□□ -2.04
snR55snR55 PCL10P53124 433 aa2.32□□□□□ -2.04
snR55snR55 NPY1P53164 384 aa2.32□□□□□ -2.04
snR55snR55 DIP5P53388 608 aa2.32□□□□□ -2.04
snR55snR55 DIA2Q08496 732 aaPredicted RBP2.32□□□□□ -2.04
snR55snR55 BEM3P32873 1128 aa2.31□□□□□ -2.04
snR55snR55 YIL077CP40508 320 aa2.31□□□□□ -2.04
snR55snR55 MAL11P53048 616 aa2.31□□□□□ -2.04
snR55snR55 YPT7P32939 208 aa2.3□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 27.8 ms