RNA–Protein interactions for RNA: snR49

snR49, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR49, Length 165 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR49snR49 SPC98P53540 846 aa2.57□□□□□ -2
snR49snR49 NAN1Q02931 896 aaKnown RBP2.57□□□□□ -2
snR49snR49 CIT1P00890 479 aa2.56□□□□□ -2
snR49snR49 TOM70P07213 617 aaKnown RBP2.56□□□□□ -2
snR49snR49 CCT5P40413 562 aaKnown RBP2.56□□□□□ -2
snR49snR49 ORC4P54791 529 aa2.56□□□□□ -2
snR49snR49 STP1Q00947 519 aa2.56□□□□□ -2
snR49snR49 HMO1Q03973 246 aaKnown RBP2.56□□□□□ -2
snR49snR49 CLF1Q12309 687 aaPredicted RBP2.56□□□□□ -2
snR49snR49 STE4P18851 423 aa2.55□□□□□ -2
snR49snR49 HSP60P19882 572 aaKnown RBP2.55□□□□□ -2
snR49snR49 RNR1P21524 888 aaKnown RBP2.55□□□□□ -2
snR49snR49 PEX1P24004 1043 aa2.55□□□□□ -2
snR49snR49 BET3P36149 193 aa2.55□□□□□ -2
snR49snR49 APT2P36973 181 aa2.55□□□□□ -2
snR49snR49 KSP1P38691 1029 aaKnown RBP2.55□□□□□ -2
snR49snR49 YHR097CP38809 366 aaKnown RBP2.55□□□□□ -2
snR49snR49 ULP2P40537 1034 aaPredicted RBP2.55□□□□□ -2
snR49snR49 ALY2P47029 1046 aa2.55□□□□□ -2
snR49snR49 ASN1P49089 572 aaKnown RBP2.55□□□□□ -2
snR49snR49 TAF8Q03750 510 aa2.55□□□□□ -2
snR49snR49 YDL124WQ07551 312 aaKnown RBP2.55□□□□□ -2
snR49snR49 ULA1Q12059 462 aa2.55□□□□□ -2
snR49snR49 OSH2Q12451 1283 aa2.55□□□□□ -2
snR49snR49 BCS1P32839 456 aa2.54□□□□□ -2
snR49snR49 MIP6P38760 659 aaKnown RBP2.54□□□□□ -2
snR49snR49 BMS1Q08965 1183 aaKnown RBP2.54□□□□□ -2
snR49snR49 LAM4P38800 1345 aa2.53□□□□□ -2
snR49snR49 RAD4P14736 754 aa2.53□□□□□ -2
snR49snR49 HOT13P36078 116 aa2.53□□□□□ -2
snR49snR49 PSA1P41940 361 aaKnown RBP2.53□□□□□ -2
snR49snR49 NOP9P47077 666 aaKnown RBP2.53□□□□□ -2
snR49snR49 NMA2P53204 395 aa2.53□□□□□ -2
snR49snR49 REC102Q02721 264 aa2.53□□□□□ -2
snR49snR49 YDL086WQ07505 273 aa2.53□□□□□ -2
snR49snR49 SSF2Q12153 453 aaPredicted RBP2.53□□□□□ -2
snR49snR49 Q0142Q9ZZW4 58 aa2.53□□□□□ -2
snR49snR49 RAD18P10862 487 aa2.52□□□□□ -2.01
snR49snR49 ABF1P14164 731 aa2.52□□□□□ -2.01
snR49snR49 BIT2P38346 545 aa2.52□□□□□ -2.01
snR49snR49 GID8P40208 455 aa2.52□□□□□ -2.01
snR49snR49 HUL4P40985 892 aa2.52□□□□□ -2.01
snR49snR49 BNA2P47125 453 aa2.52□□□□□ -2.01
snR49snR49 YGR125WP53273 1036 aa2.52□□□□□ -2.01
snR49snR49 WRS1Q12109 432 aaKnown RBP2.52□□□□□ -2.01
snR49snR49 PRP28P23394 588 aa2.51□□□□□ -2.01
snR49snR49 ECM32P32644 1121 aaKnown RBP2.51□□□□□ -2.01
snR49snR49 SEC6P32844 805 aa2.51□□□□□ -2.01
snR49snR49 PIG2P40187 538 aa2.51□□□□□ -2.01
snR49snR49 IRC8P47046 822 aa2.51□□□□□ -2.01
snR49snR49 RTA1P53047 317 aa2.51□□□□□ -2.01
snR49snR49 ARG7Q04728 441 aa2.51□□□□□ -2.01
snR49snR49 THI22Q06490 572 aa2.51□□□□□ -2.01
snR49snR49 ECM3Q99252 613 aa2.51□□□□□ -2.01
snR49snR49 TPK2P06245 380 aa2.5□□□□□ -2.01
snR49snR49 YHR020WP38708 688 aaKnown RBP2.5□□□□□ -2.01
snR49snR49 YNL195CP40168 261 aa2.5□□□□□ -2.01
snR49snR49 YFL052WP43551 465 aa2.5□□□□□ -2.01
snR49snR49 RSC8P43609 557 aaKnown RBP2.5□□□□□ -2.01
snR49snR49 PIP2P52960 996 aa2.5□□□□□ -2.01
snR49snR49 COX18P53239 316 aa2.5□□□□□ -2.01
snR49snR49 CHS5Q12114 671 aaKnown RBP2.5□□□□□ -2.01
snR49snR49 MDM20Q12387 796 aaKnown RBP2.5□□□□□ -2.01
snR49snR49 AI5_ALPHAQ9ZZX1 630 aa2.5□□□□□ -2.01
snR49snR49 CTP1P38152 299 aa2.49□□□□□ -2.01
snR49snR49 KHA1P40309 873 aa2.49□□□□□ -2.01
snR49snR49 PMT6P42934 759 aa2.49□□□□□ -2.01
snR49snR49 MPS3P47069 682 aa2.49□□□□□ -2.01
snR49snR49 DIA2Q08496 732 aaPredicted RBP2.49□□□□□ -2.01
snR49snR49 FLC1Q08967 793 aa2.49□□□□□ -2.01
snR49snR49 FRE7Q12333 620 aa2.49□□□□□ -2.01
snR49snR49 AAD3P25612 363 aa2.48□□□□□ -2.01
snR49snR49 YEL1P34225 687 aa2.48□□□□□ -2.01
snR49snR49 MTC2P34246 357 aa2.48□□□□□ -2.01
snR49snR49 MCD4P36051 919 aa2.48□□□□□ -2.01
snR49snR49 APL3P38065 1025 aa2.48□□□□□ -2.01
snR49snR49 TIM54P47045 478 aa2.48□□□□□ -2.01
snR49snR49 RFX1P48743 811 aa2.48□□□□□ -2.01
snR49snR49 NPY1P53164 384 aa2.48□□□□□ -2.01
snR49snR49 GIS2P53849 153 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
snR49snR49 LEE1Q02799 301 aaKnown RBP2.48□□□□□ -2.01
snR49snR49 YDR179W-AQ03983 463 aa2.48□□□□□ -2.01
snR49snR49 RKI1Q12189 258 aa2.48□□□□□ -2.01
snR49snR49 FEN2P25621 512 aaKnown RBP2.47□□□□□ -2.01
snR49snR49 MSS1P32559 526 aaPredicted RBP2.47□□□□□ -2.01
snR49snR49 YGL117WP53133 265 aa2.47□□□□□ -2.01
snR49snR49 DIP5P53388 608 aa2.47□□□□□ -2.01
snR49snR49 YSH1Q06224 779 aaPredicted RBP2.47□□□□□ -2.01
snR49snR49 CAN1P04817 590 aa2.46□□□□□ -2.02
snR49snR49 MIH1P23748 554 aa2.46□□□□□ -2.02
snR49snR49 BEM3P32873 1128 aa2.46□□□□□ -2.02
snR49snR49 YKR051WP36142 418 aa2.46□□□□□ -2.02
snR49snR49 SNF12P53628 566 aa2.46□□□□□ -2.02
snR49snR49 ARP4P80428 489 aa2.46□□□□□ -2.02
snR49snR49 ORM2Q06144 216 aa2.46□□□□□ -2.02
snR49snR49 LEU2P04173 364 aaPredicted RBP2.45□□□□□ -2.02
snR49snR49 NGL2Q03264 515 aaKnown RBP2.45□□□□□ -2.02
snR49snR49 VPS36Q06696 566 aa2.45□□□□□ -2.02
snR49snR49 VBA3P25594 458 aa2.44□□□□□ -2.02
snR49snR49 EUG1P32474 517 aa2.44□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 132.6 ms