RNA–Protein interactions for RNA: YKL130C

SHE2, Transcript of RNA-binding protein that binds specific mRNAs and interacts with She3p, yeastyeast

Gene SHE2, Length 741 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE2YKL130C USV1Q12132 391 aa3.01□□□□□ -1.93
SHE2YKL130C ZRT2Q12436 422 aa3.01□□□□□ -1.93
SHE2YKL130C PHO8P11491 566 aa3□□□□□ -1.93
SHE2YKL130C RPA135P22138 1203 aaKnown RBP3□□□□□ -1.93
SHE2YKL130C BET3P36149 193 aa3□□□□□ -1.93
SHE2YKL130C MUP3P38734 546 aa3□□□□□ -1.93
SHE2YKL130C MNN1P39106 762 aa3□□□□□ -1.93
SHE2YKL130C MRK1P50873 501 aa3□□□□□ -1.93
SHE2YKL130C ARG5,6Q01217 863 aa3□□□□□ -1.93
SHE2YKL130C YDR338CQ05497 695 aa3□□□□□ -1.93
SHE2YKL130C YLR125WQ12138 136 aa3□□□□□ -1.93
SHE2YKL130C YGR161W-CQ3E744 92 aa3□□□□□ -1.93
SHE2YKL130C THR1P17423 357 aaKnown RBP2.99□□□□□ -1.93
SHE2YKL130C GAL11P19659 1081 aa2.99□□□□□ -1.93
SHE2YKL130C ERG6P25087 383 aaKnown RBP2.99□□□□□ -1.93
SHE2YKL130C GMH1P36125 273 aa2.99□□□□□ -1.93
SHE2YKL130C RSP5P39940 809 aaKnown RBP2.99□□□□□ -1.93
SHE2YKL130C YFL052WP43551 465 aa2.99□□□□□ -1.93
SHE2YKL130C SCS3P53012 380 aa2.99□□□□□ -1.93
SHE2YKL130C RGC1Q06108 1083 aaKnown RBP2.99□□□□□ -1.93
SHE2YKL130C MCM21Q06675 368 aa2.99□□□□□ -1.93
SHE2YKL130C FLC1Q08967 793 aa2.99□□□□□ -1.93
SHE2YKL130C CLF1Q12309 687 aaPredicted RBP2.99□□□□□ -1.93
SHE2YKL130C HRP1Q99383 534 aaKnown RBP2.99□□□□□ -1.93
SHE2YKL130C TSR4P25040 408 aa2.98□□□□□ -1.93
SHE2YKL130C KCC4P25389 1037 aa2.98□□□□□ -1.93
SHE2YKL130C FUB1P25659 250 aa2.98□□□□□ -1.93
SHE2YKL130C YHR020WP38708 688 aaKnown RBP2.98□□□□□ -1.93
SHE2YKL130C BNA3P47039 444 aaKnown RBP2.98□□□□□ -1.93
SHE2YKL130C FMP30Q02883 468 aa2.98□□□□□ -1.93
SHE2YKL130C STE12P13574 688 aa2.97□□□□□ -1.93
SHE2YKL130C NUP1P20676 1076 aa2.97□□□□□ -1.93
SHE2YKL130C THI4P32318 326 aa2.97□□□□□ -1.93
SHE2YKL130C TIM23P32897 222 aa2.97□□□□□ -1.93
SHE2YKL130C TOM20P35180 183 aa2.97□□□□□ -1.93
SHE2YKL130C SET3P36124 751 aa2.97□□□□□ -1.93
SHE2YKL130C CRP1P38845 465 aaKnown RBP2.97□□□□□ -1.93
SHE2YKL130C XBP1P40489 647 aa2.97□□□□□ -1.93
SHE2YKL130C TY4A-JP47023 414 aa2.97□□□□□ -1.93
SHE2YKL130C NET1P47035 1189 aa2.97□□□□□ -1.93
SHE2YKL130C RTA1P53047 317 aa2.97□□□□□ -1.93
SHE2YKL130C SPC98P53540 846 aa2.97□□□□□ -1.93
SHE2YKL130C YLR149CQ99296 730 aa2.97□□□□□ -1.93
SHE2YKL130C CAN1P04817 590 aa2.96□□□□□ -1.94
SHE2YKL130C SSB1P11484 613 aaKnown RBP2.96□□□□□ -1.94
SHE2YKL130C RNR1P21524 888 aaKnown RBP2.96□□□□□ -1.94
SHE2YKL130C GET2P40056 285 aa2.96□□□□□ -1.94
SHE2YKL130C SSB2P40150 613 aaKnown RBP2.96□□□□□ -1.94
SHE2YKL130C LTP1P40347 161 aa2.96□□□□□ -1.94
SHE2YKL130C BNA2P47125 453 aa2.96□□□□□ -1.94
SHE2YKL130C REC102Q02721 264 aa2.96□□□□□ -1.94
SHE2YKL130C RGT2Q12300 763 aa2.96□□□□□ -1.94
SHE2YKL130C Q0142Q9ZZW4 58 aa2.96□□□□□ -1.94
SHE2YKL130C PGK1P00560 416 aaKnown RBP2.95□□□□□ -1.94
SHE2YKL130C MIP6P38760 659 aaKnown RBP2.95□□□□□ -1.94
SHE2YKL130C YJR142WP47173 342 aa2.95□□□□□ -1.94
SHE2YKL130C NPY1P53164 384 aa2.95□□□□□ -1.94
SHE2YKL130C COX18P53239 316 aa2.95□□□□□ -1.94
SHE2YKL130C YGR151CP53287 111 aa2.95□□□□□ -1.94
SHE2YKL130C NOP14Q99207 810 aaKnown RBP2.95□□□□□ -1.94
SHE2YKL130C TOP1P04786 769 aa2.94□□□□□ -1.94
SHE2YKL130C ADE5,7P07244 802 aaKnown RBP2.94□□□□□ -1.94
SHE2YKL130C ERR1P0CX10 437 aa2.94□□□□□ -1.94
SHE2YKL130C ERR2P0CX11 437 aa2.94□□□□□ -1.94
SHE2YKL130C ABF1P14164 731 aa2.94□□□□□ -1.94
SHE2YKL130C PEX1P24004 1043 aa2.94□□□□□ -1.94
SHE2YKL130C SAT4P25333 603 aaKnown RBP2.94□□□□□ -1.94
SHE2YKL130C GRX4P32642 244 aa2.94□□□□□ -1.94
SHE2YKL130C RPN10P38886 268 aaKnown RBP2.94□□□□□ -1.94
SHE2YKL130C MSH2P25847 964 aa2.93□□□□□ -1.94
SHE2YKL130C YUR1P26725 428 aa2.93□□□□□ -1.94
SHE2YKL130C SFP1P32432 683 aa2.93□□□□□ -1.94
SHE2YKL130C KSP1P38691 1029 aaKnown RBP2.93□□□□□ -1.94
SHE2YKL130C PMC1P38929 1173 aaPredicted RBP2.93□□□□□ -1.94
SHE2YKL130C UBP12P39538 1254 aa2.93□□□□□ -1.94
SHE2YKL130C RTS3P53289 263 aa2.93□□□□□ -1.94
SHE2YKL130C MPS1P54199 764 aa2.93□□□□□ -1.94
SHE2YKL130C UGO1Q03327 502 aa2.93□□□□□ -1.94
SHE2YKL130C DIA2Q08496 732 aaPredicted RBP2.93□□□□□ -1.94
SHE2YKL130C ECM3Q99252 613 aa2.93□□□□□ -1.94
SHE2YKL130C BCS1P32839 456 aa2.92□□□□□ -1.94
SHE2YKL130C UGP1P32861 499 aaKnown RBP2.92□□□□□ -1.94
SHE2YKL130C MCD4P36051 919 aa2.92□□□□□ -1.94
SHE2YKL130C YMC2P38087 329 aa2.92□□□□□ -1.94
SHE2YKL130C PIG2P40187 538 aa2.92□□□□□ -1.94
SHE2YKL130C NOP2P40991 618 aaKnown RBP2.92□□□□□ -1.94
SHE2YKL130C NOP9P47077 666 aaKnown RBP2.92□□□□□ -1.94
SHE2YKL130C YJR008WP47085 338 aa2.92□□□□□ -1.94
SHE2YKL130C DNM1P54861 757 aa2.92□□□□□ -1.94
SHE2YKL130C HMO1Q03973 246 aaKnown RBP2.92□□□□□ -1.94
SHE2YKL130C YDL086WQ07505 273 aa2.92□□□□□ -1.94
SHE2YKL130C PHO5P00635 467 aa2.91□□□□□ -1.94
SHE2YKL130C APN1P22936 367 aa2.91□□□□□ -1.94
SHE2YKL130C PRP28P23394 588 aa2.91□□□□□ -1.94
SHE2YKL130C YMC1P32331 307 aa2.91□□□□□ -1.94
SHE2YKL130C PEX6P33760 1030 aa2.91□□□□□ -1.94
SHE2YKL130C STO1P34160 861 aaKnown RBP2.91□□□□□ -1.94
SHE2YKL130C MTC2P34246 357 aa2.91□□□□□ -1.94
SHE2YKL130C YHR097CP38809 366 aaKnown RBP2.91□□□□□ -1.94
SHE2YKL130C GDH3P39708 457 aa2.91□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms